Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G20090_circ_g.5 |
ID in PlantcircBase | ath_circ_003503 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 6967617-6968625 JBrowse» |
Reference genome | TAIR10.38 |
Type | ue-circRNA |
Identification method | circRNA_finder, find_circ |
Parent gene | AT1G20090 |
Parent gene annotation |
RAC-like GTP-binding protein ARAC4 |
Parent gene strand | + |
Alternative splicing | AT1G20090_circ_g.2 AT1G20090_circ_g.3 AT1G20090_circ_g.4 AT1G20090_circ_g.6 AT1G20090_circ_g.7 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | Yes-No |
Splicing signals | GT-AG |
Number of exons covered | AT1G20090.1:6 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.353889588 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Chu et al., 2017 |