Detail information of BGIOSGA025615_circ_g.6


General Information
CircRNA Name BGIOSGA025615_circ_g.6
ID in PlantcircBase osi_circ_007151
Alias 7:13725063|13729742
Organism Oryza sativa ssp. indica
Position chr7: 13725063-13729742  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA025615
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA025615_circ_g.1 BGIOSGA025615_circ_g.2 BGIOSGA025615_circ_g.3 BGIOSGA025615_circ_g.4 BGIOSGA025615_circ_g.5 BGIOSGA025615_circ_g.7 BGIOSGA025615_circ_g.8
Support reads NA
Tissues leaf
Exon boundary   Yes-No
Splicing signals   GT-AG
Number of exons covered BGIOSGA025615-TA:7
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   TAAGGCTGATATCAAAGATATCTTGGAGCGTGCTTCTAGAATATACGAGGACTCTTCTCATGGT
AGCACACAAGAATTAGAGCAAGCTTCGAAGGGAGAAcattatcagggaagatcattcaaaatgc
attcttggcacaacatcgcccacaggctagacacagcacaagatatcccagtgacttttgtgcc
ctcgatac
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence CATTATCAGGGAAGATCATTCAAAATGCATTCTTGGCACAACATCGCCCACAGGCTAGACACAG
CACAAGATATCCCAGTGACTTTTGTGCCCTCGATACCCGCAGCGTGCATTCTTTCCAGGAACAT
AGACTAAGACTGGCTGGTACTTCAGCCAAGTGGTTAAATACAATATCAACAGCATGGATTAGCT
CCAGCAAACAAGCATATATTAGCTGCAATGGTGTGTTCTAGGCTCTCATTGATCAGGTTGCTTA
ATGCTCACTAGTGTTACGTTAGGATTTTTTTTTCACAAACTCATTTTGGTGATTTTATGCCAGA
TTATAGAATCAATACTTTTTTTTTGAATGTGTGTATCAACAAATCTGAAAAGTCACTTACACTA
CCTTCATTGCAGCTGCTCAAGGTAGCAGCGTTGTCTCATCCTCTGCGAAAGTTGACTTTTTAAA
GCTCCAGAATGGCAGGTATAACAATGTTCACTCTTTGTATGATCTACACCCTCTAGTCTAACTA
TGGTATTGCTCTTTCTAAGGTCAAATTGTATGGCTATTTTTCTCTTTAAGCCAATGGTAATGAG
CATATGGTTTCCAACTATGATGTTGTTTGAAAGCACCGTGGTTCTTATGTTAACAGTCAATTCC
ATGTCTAGTGCTTCTGTGTTCCTTTTCATTTAACCATCTAATTGCTTTGGTGTTTTCACATGCA
TCCCATGTTTTTGCTTTATGTGCTGCTCTTAAACATTTCAATTGCTACTGAATTTCAATCTTAC
TTGTGTCAGAGAAAAAACTCTTTGAGATAAAAAAAATATTGTAAGTTGTAACAACATGGCAAGA
CCTATAACTATACATCCTCATTTGAGATTATAATTACAAGAATATTGCTTCTGTAAACCGCAGA
ATCACATAATTTTGAGCAATGCTGTTGCTTAGTTTTTTCTAGTTCAGCTGCAATTGACAAAAGG
TATCTGGATATCCTGCTGGTGAAATGCATATGACCATTGAATAATTATTGTATGAATACAAGTT
CAACTTTGGCTTTGACCTTTTTTAGAAAGTAATTACATGCGTTTTGGGCTGCGCATTGCACTTT
ATGGTAAATCATTCGGTGATCTAATGGATATTGCTAGTCTCAAACAAAAAAATATGGCAAGAGC
TTGCGAGATATTGCTAGTTTCCATCCTATCTTTATCTGCATGGCATGGATTGGTGCATTAAAAG
AACTTTTTCTTCAGCTCTAGGCCATTAGGAGAATTTGTCTTTAGTTATACAGCATAGTAATTCC
AAATTGCTAGCTTGTGTGTTACATGTGGTTCATGTCATCCTGTCTATGGACTAGTTTCTCTTTT
GACATCACTTGAAGGAGACACCCTGTATCTGTATCTAATTGGGCATATTTTCTCTATATTCCTA
TCTCTTAGCATGATATTTTCCCTGATATAACATCTTCCTCAGACCTCGGACTAAAGGCTAAAAA
TTCATGTTTGATCAACTCTTGATTTATGTCATGGGCATATGCCTATCATAATTTATTTGGAATT
GTGTGATTATTGTGAACTTATATTGTTCTTCTTGATAGCTGGTATGTTGGAATTAAGTTATCAC
TTTTGCTAAGAAAGGTGAAGAATCAATTGATCATACAGCTTTGGGATGTTCTAGATGGGGGTTA
TAACAATTTTAGTTAAAGCTAAAGAGTTTATTGTTCTGCATCCATGACGTGTTATTAATCAATT
GGCTTTACTCTCTTCTATTTCTCACAGTGATATCCGTGGTGTTGCTGTTGGTGGGGTCGAAGGT
GAGCCCGTAAATCTCACTGAGCCTGTTACTGAAGCAATAGCTTCTGCATTTGCTGCATGGTTAT
TAAACAAGAAGAAAGAGGATGGATGGAGACGTTTAAGAATTTCTGTTGGACATGATTCTCGAAT
TTCTGCACATAAATTGCAGGTGGCTCCTGTTCTCCGCTCTTATTTTTATTGAATCTTTATTCAA
AATAATGCATTGCATGCTTTAAGGAATTAAGGTAACCCCTTATAATTACTAAAATCCTGTTCCA
ACTAGTGATGATTTGGACTATTCTCAGTTTTAACCACTAACCAGTGTTGTTGTTTTTTTTTTTT
GCCCAATTATGTTGCCATGTTGAAATTTGGGATTAACAAACTTTTATTTCATATATGGATCAAG
AAGCATTCTCGCAGAAAGAAAAAGGATGTGAACAACTCTTCTGTTTTGACATCTGCAAGCATTT
CTATGATTGCGGCAGATAGTTGTAATTATATGTATTTTGTCTAAATATAAAGTGGTACGAAAGA
CTTGTATATCCAGATATCTGCTGCTTATTTGCATCTGATGTTGTACTAGCTACAGGTTGTTTTT
TTTTTCTTGAATGCAAATTGACTGAAATCGTTCACTTTATGTAGTGATACTGCTCTATTTCCAT
ATATGTTGAGAATTGAACTTGGCTTTTGGAGCATACGTCAGTATATTGTATGTTGTTGGGTAAG
GCTGTTGGAGTTGATGGATGGAGGTCAAAGTTCACACCTTCTGTGTTTGCACTGTGTGAGTTGA
TTGGGAAATGGAATTAGAGCTCCACACGTGGTGTCCAAATAAAAACTACTCATTCAGGAGGGAA
TAGGAAATTGTGCAAAAGATAATTCCTTGAAAAGTTGTACCTTTTGCATGCAAAGTTTCTTCTA
CTACTTACAATCAATTGAATTACCATTTGTACTTTTGTGACAAAAAATATACACACCTAATGAG
TTATTAGAAGGACCTTTGTGCATGCCTAAGTATTTGGATTTGTAGTTCTGGTACATATTAGTCA
AGGATGTGTTCTCTGCTACTTTTTATAATTTTTCAATGATGCTATTTGATTTATATTAGGCACT
GCATTCTGTTGGTATAAATAAATGAACAGAAATTTTCCAGTCCTGACTTCTGACAAGTCTATAT
GTAGTTTGAGCAATGTGATTTGGTCCTTCAATTTTTCTTTTTGCAAGTATTGCTTATTAAAAGT
GATAATTGTCAGGATGCAGTTACTCTTGGAATTACCACTGCAGGACATGATGTTTTACAATTTG
GGTGAGTTGAATATTTATTTTTCTTACATTTATCAAGATCTTCAATTTTTCCTGTAGCCTTCAA
TGCTTAGAATTTAAGTGTGTAATTGATGAAGTTCTCTTGCTACTGTGATTCTTTTTCACTCAGA
AACTCCACACATCAATTCTTATGTAACTACAAGCCTAGGGAACTAATTTGAACTACATCAAATG
ATTTCCACAATTTCAATCAGTCTTTTCTTCACAACTTTCTTACTTCTCTGCTTAACAAGTAAAG
ATCTGCCAAATATTCATTTATGACAATTCATGATGTAGATTGGCTTCAACACCAGCAATGTTCA
ACAGTACACTTACAGAAGATGAGATAAATCATTTGCCAGTTGATGGAGCCATAATGATAACAGG
TACTATTCCCAGTTTAATGTGCAACATTAGAAGACAAGCATTTCTTCAGATGAATACACAAGAG
TTTTGAAAAATATACATGGTGTCCAATCTCTTCTCCAAACATATGTAAATTTTATTGATGATTC
TTTGTGACTACATAATTGTTCTCTAATTATTGGAAAATATCTCCTTTATTGGGAATTTCTGTTC
TTGCCACCACATATGTGCACCATCTTAGTATTGCCCATGAAAAGTCATCCTTTCCCATCCTTCT
TCCTCATGGTCATGGGAGCTCCTTTCTATTTTCCTCCTGAAATATATTATCTGAAGCCCCTACT
ATTTTCCTATTCCAGCCCCGCCCATCTTATCCATTCTTCTCTAATAAACTCCTAGGAAACCACT
ATCACCAAGATCTTGTTGCTTGGCACCAAACCCTGCCAATGAAAAGCACAGTAGGGCCAGTGAA
GAGGGTGCACATACTCCACTCCCTTTTGAATCCCCTTCGGCGCAAATAGTAAGAATCACTGCCA
CAGTTCTGATGGCCTAGCAGCCCGGGGAGCAGGGAGCCTGCGTGAGGAGGTACTGCTGAGTGGA
CGGAGCTGGGTAACTTGGGTTCATACTTCATAATCACACACAGGTAGCCAGTGGGGGTGCTTCT
GCTACAACTCCTCTATGTAGATCGATCCTACTCCATTTATTTGTGTAGTTATTTATTGTTGGGT
AGTTTGAGTTTATCTGGCATCCATGCCTAGGCAGACACACTAAGCTATTCCTTGAAGTGGACTT
GGAATTGCTCCTAAGAATCAAGGATGGTGAGGAAGAGGAAAGAAGACGTAGGTGGGAAAAATTC
TTACGAGGGGCAACGTGTAATATCGTAGTAACTTTCAAACATGAAACAGTTTCGATACTGGCAA
AATCGAGACACATTCTGTGGTAGAACCAGTATGGCACACATTTGTAGTCACTAGAACAAAGTTT
TCCCTTTCTTGTTTTACCACATGTGAAATGCCTAATTATGTAGAAACAACTGTTTGATTCTCTA
TTTTTAACCAAACAAACTTCTGCTCCCACTTTTTCACAGCAAGTCATCTTCCATACAACCGGAA
TGGTCTCAAATTTTTTACAAGTGCTGGTGGTTTGAATAAGGCTGATATCAAAGATATCTTGGAG
CGTGCTTCTAGAATATACGAGGACTCTTCTCATGGTAGCACACAAGAATTAGAGCAAGCTTCGA
AGGGAGAA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021