Detail information of ENSRNA049495457_circ_g.4


General Information
CircRNA Name ENSRNA049495457_circ_g.4
ID in PlantcircBase osi_circ_018972
Alias Chr02:29975291_29976865(ZS97RS2)
Organism Oryza sativa ssp. indica
Position chrAAAA02037638.1: 4423-5997  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene ENSRNA049495457
Parent gene annotation NA
Parent gene strand +
Alternative splicing ENSRNA049495457_circ_igg.1 ENSRNA049495457_circ_igg.2 ENSRNA049495457_circ_g.1 ENSRNA049495457_circ_g.2 ENSRNA049495457_circ_g.3 ENSRNA049495457_circ_g.5 ENSRNA049495457_circ_g.6 ENSRNA049495457_circ_g.7 ENSRNA049495457_circ_g.8 ENSRNA049495457_circ_g.9 ENSRNA049495457_circ_g.10
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   GT-AA
Number of exons covered ENSRNA049495457-T1:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   TCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCG
AGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTgtatgaactaattcgaactgtgaaactg
cgaatggctcattaaatcagttatagtttgtttgatggtacgtgctactcggataaccgtagta
attctaga
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGAT
GGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTC
CGGGAGGGGCGCATTTATTAGATAAAAGGCTGACGCGGGCTCCGCCCGCTGATCCGATGATTCA
TGATAACTCGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATC
AACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGA
TTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTAC
CCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCTTTAGTGTCTGGTAA
TTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCA
GCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTG
GACCTTGGGCCGGGCCGGCCGGTCCGCCTCACGGCGAGCACCGACCTGCTCGACCCTTCTGCCG
GCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGCGCCGTTACTTTGAAGAAATTA
GAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATCATAGGATTCCGGT
CCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGGCATTCGTATT
TCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAG
GATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCT
CAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTA
TGAGAAATCAAAGTCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATT
GACGGAAGGGCACCACCAGGCGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTAC
CAGGTCCAGACATAGCAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGGTGGTGGTG
CATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAG
CCTGCTAACTAGCTATGCGGAGCCATCCCTCCGCAGCTAGCTTCTTAGAGGGACTATGGCCGTT
TAGGCCACGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGC
GCGCTACACTGATGTATTCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAA
ATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGC
GCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTT
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021