Plant Circular RNA Database

Detail information of AT4G16280_circ_g.3

			
						 General Information
					
						CircRNA Name
						AT4G16280_circ_g.3
					
						ID in PlantcircBase
						ath_circ_031183
					
						Alias
						AT4G16280_C2
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr4: 9207163-9211511  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							u-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, MapSplice, PcircRNA_finder, circRNA_finder, find_circ, CIRI2
					
						Parent gene
						
							AT4G16280						
					
						Parent gene annotation
						
							Flowering time control protein FCA
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT4G16280_circ_g.1 AT4G16280_circ_g.2 AT4G16280_circ_g.4 AT4G16280_circ_g.5 AT4G16280_circ_g.6 AT4G16280_circ_g.7 AT4G16280_circ_g.8 AT4G16280_circ_g.9 						
					
						Support reads
						3
					
						Tissues
						root, aerial, inflorescences, whole_plant/leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT4G16280.4:17
AT4G16280.3:17
AT4G16280.2:17
AT4G16280.1:17

General Information
CircRNA Name	AT4G16280_circ_g.3
ID in PlantcircBase	ath_circ_031183
Alias	AT4G16280_C2
Organism	Arabidpsis thaliana
Position	chr4: 9207163-9211511 JBrowse»
Reference genome	TAIR10.38
Type	u-circRNA
Identification method	CIRCexplorer, CIRI, MapSplice, PcircRNA_finder, circRNA_finder, find_circ, CIRI2
Parent gene	AT4G16280
Parent gene annotation	Flowering time control protein FCA
Parent gene strand	-
Alternative splicing	AT4G16280_circ_g.1 AT4G16280_circ_g.2 AT4G16280_circ_g.4 AT4G16280_circ_g.5 AT4G16280_circ_g.6 AT4G16280_circ_g.7 AT4G16280_circ_g.8 AT4G16280_circ_g.9
Support reads	3
Tissues	root, aerial, inflorescences, whole_plant/leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT4G16280.4:17 AT4G16280.3:17 AT4G16280.2:17 AT4G16280.1:17

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGCCTCAGGGTAATTACCCCAGGAAGAGTGATCTGATTGTGCAGTGCTCTGATGGCTCTATCCG
CATCTTTCGAAGTTGCATATTTTACAAAACAACAGCctcaagctttattcttccacatgagttc
ttggggagattgacggctctgggaaaaagagatatgattgtaaagagaattaaggaaaaaaacg
gtttcaac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1761
Transcript exons: 9207163-9207208,9207341-9207406,9207590-9207622,9207792-
9207824,9208011-9208043,9208135-9208314,9208469-9208648,
9208814-9209281,9209367-9209450,9209768-9209930,9210019-
9210078,9210285-9210349,9210438-9210517,9210605-9210671,
9211032-9211099,9211297-9211348,9211429-9211511
CTCAAGCTTTATTCTTCCACATGAGTTCTTGGGGAGATTGACGGCTCTGTTGAGTTCTTGATAT
ATCATTCATTGAAGCAGCTCCCACGGGTATATGTGTCCGAGCATAATCCTGAGCATTCTGACCA
ATTCCTGACATAGGAAACTGGCTATTTTGACCTACTGGCAATGATGGATACTGAGTATTATGGC
TGGCCCCTGGAGTTGGATACAGTGAAGAATAAAACGGCTGCTGTAATTGCTGGCCCTGATATTG
CTGCTGAACTTGTTGTGGTTGTTGCTGCAACGGCTGTAATTGGGTCTGGGACTGCTGTATAGTT
GGCTTCTCTTGATGTTGTTGCTGTTTCTGTTGCTCTCGTTCGAACACTATCATTTCCTCAGGTT
TTTCCCACTTGCTTTCACCCGTTAGACCATTGTAATAATATTTAAATCCATCAGGCGAGGTATG
CTCGGTCCAGGTACATTTGACAGAACCTACGCTCTGACTTACTGCAGGTGCAGCTGTTTGCACA
TAGCTCACTGGTGTCGAACCAGTGGTGCTAGCCACTCTTGGAATTGCAGATCCAGCCCACTGTT
GTTTACCAGCTCGGCCATTCTGTGAGAGTGGTAAATTTTGGTTTGGTTGCTGCATAGACTGCAC
CTGCTGCTGCAGCTGAGAAATTGCTTGCTGAGACGATTGGAATGTTGCTTGTAGACTCTGAGTT
TGCTGCGACAAGAGCTGAGCTAGCTCAGAAGGAGGATGTTGCATCTTTTGTAGCGGTTGCTGCT
GGGAACGAGGGGGAAATTGAACAGTTGCAGAAGACACAGTTGTTGGCCGTAGATTAATGTTCAA
AGGAGTTTGAGGAGCAGTTGCACGACTGATGTTTTGCTGTGGTGGCAGCTGAGAGGTAGGCAAC
TGGCTGCTATAAGCATAAGGATTCTGCAAGGGTGCCTGGGCCCCAGGGAAATTAGTTTGCGGAC
GGAGGGGGAGAGGGAGACCCTGTGGACTGTGAAGAGGTTTTTTTAATGGTGTTATATGCTGGCC
AGCTGCCCGATTTTGCTGTTGCAATGTGGCAGAAGATGAAACTCCAGGGACTGGGAGAGGGTTA
AGGGGAGGAACACCATAACCACCTAACGGGCCACCCTGATTTGAAGGCAATGTTGCTTGACCTG
GTTTAGGGGAAAAGTCACTACCGGCACCACGGATCCCAGTGTTACTAGGTGGGCCTACGTTTCG
TGAAGTAGCTGGACGCCAAGGATTTGTGTGGCTTACATCCCCACTAGAGTCACCAAAGTTAGAG
GTAGGCCTTGGTCCTGAAGCTTGAAAACGAGGCCCTGAACCAAGTCCAACAGGAGGTGCCATTT
CCCTTGACTCGCCAGGTTTAGGCCTCTTTGGCTCAGCAAACCGAACAATCAATGGCTGATTGCA
ACCTCTCATGGTATAAGTTCCGTTGAGACCATCGATAGCTGCCATTGCCGTCTCTTTGCTTGAA
TATTTAACAAACCCACATCCACGACTCTGTCTATATTCATCCCGCATGAGATAGACATCTTCCA
CATGACCAAATTGTAAAAAGATCTCCTCAACTTCTTTTTCAGTGGCTTGCTTGTTTAGTGAACC
AACAAAAAGCTTAAACTCTAGGGTGCCTATGCGTTCTCTCTCCCCGTCAGCATATCGAACTTGA
ACAGGACCAGTTCCCCCAGGAAGAGTGATCTGATTGTGCAGTGCTCTGATGGCTCTATCCGCAT
CTTTCGAAGTTGCATATTTTACAAAACAACAGC
						
					

						Genomic sequence
						
							CTCAAGCTTTATTCTTCCACATGAGTTCTTGGGGAGATTGACGGCTCTGGGAAAAAGAGATATG
ATTGTAAAGAGAATTAAGGAAAAAAACGGTTTCAACGAAAAAGAACATCTGAATACCAAAGGAC
GAATTATGAACAGAGAGAAGTTCTGAATCACTGATAAAAACCATAACTACCTGTTGAGTTCTTG
ATATATCATTCATTGAAGCAGCTCCCACGGGTATATGTGTCCGAGCATAATCCTAGACAATCCA
AACAGAATAGAAAATAAGCTCTGCCTAAACCATTTTTAACCAAGGAAGGAAGTCATATCACTGA
TGTTTCTTTTTAAAATGACATTAAATCCAAGAACTCATTATGTTCTGTGATTAAATTCAAAGGT
ACAGAAGGTATGGGAAATTGTTAATACAAAATGAGATATATACCTGAGCATTCTGACCAATTCC
TGACATAGGAAACTGCATTTTCCAGAAAAGAAAAAAAGATTTTCAACCAGAGAATATACGAATC
AGATGAAGTTTTTGTTATTCTGATATGTTACAAAAACTACGCATCAGAGGAAGTCAATGTTGTA
ACTGAGAATCAATCAGTTCAATGAAAAATAAGTCCACAGATTCAGATATGTACCTGGCTATTTT
GACCTACTGGCAATGATGGATACTGCATTTTAGAAAGGAAAATAGGCATTCACGTTAGAGATTT
GTTATCTGTATTTCAAAATGCTGGCAAAACCATGGCTACTGAATTTTACTTTAAGGTGGTCAAT
CTCCTTCTACCACAAGATTAGCATATCAAGAATCAAATCTTGAAATGAAAAATAAGTAAACAGA
TTAAACAGATATACACCTGAGTATTATGGCTGGCCCCTGGAGTTGGATACTGCAACTCCAAATG
AACAAGAGTAAATATGCAAATTAGAAACCATGTGACAAAAATATTTGAATGTAACCAGCATGAA
AACGAAACCAACCAGTGAAGAATAAAACGGCTGCTGTAATTGCTGGCCCTGATATTGCTGCTGA
ACTTGTTGTGGTTGTTGCTGCAACGGCTGTAATTGGGTCTGGGACTGCTGTATAGTTGGCTTCT
CTTGATGTTGTTGCTGTTTCTGTTGCTCTCGTTCGAACACTATCATTTCCTCAGGTTTTTCCCA
CTGCAAAAGTGAATTATATACATAATATGGCACGTACTGAAGGACTTCAAATATAAAATATACA
TGTGTAAGGATTATCAATAGCACAATAAACCAGGAGGAATACTCCTGAAACTCACAAGGAAATA
TATTAAAGAGGAACCACGTTTCTCACCTTGCTTTCACCCGTTAGACCATTGTAATAATATTTAA
ATCCATCAGGCGAGGTATGCTCGGTCCAGGTACATTTGACAGAACCTACGCTCTGACTTACTGC
AGGTGCAGCTGTTTGCACATAGCTCACTGGTGTCGAACCAGTGGTGCTAGCCACTCTTGGAATT
GCAGATCCAGCCCACTGATAAAGAAGCAGCCGAGAGGAACATTAGAAAAGGGGAGAATACTAAA
ACACATGAAGGATAAAAAACGGGATGTCTATCAGGAAATAATTTTAAGTTAAAACAACACAATA
GCAGCTGAAGAACCCGTCTGGGCAGATGCAACTGAGAGACTATATTCATACCTGTTGTTTACCA
GCTCGGCCATTCTGTGAGAGTGGTAAATTTTGGTTTGGTTGCTGCATAGACTGCACCTGCTGCT
GCAGCTGAGAAATTGCTTGCTGAGACGATTGGAATGTTGCTTGTAGACTCTGAGTTTGCTGCGA
CAAGAGCTGAGCTAGCTCAGAAGGAGGATGTTGCATCTTTTGTAGCGGTTGCTGCTGGGAACGA
GGGGGAAATTGAACAGTTGCAGAAGACACAGTTGTTGGCCGTAGATTAATGTTCAAAGGAGTTT
GAGGAGCAGTTGCACGACTGATGTTTTGCTGTGGTGGCAGCTGAGAGGTAGGCAACTGGCTGCT
ATAAGCATAAGGATTCTGCAAGGGTGCCTGGGCCCCAGGGAAATTAGTTTGCGGACGGAGGGGG
AGAGGGAGACCCTGTGGACTGTGAAGAGGTTTTTTTAATGGTGTTATATGCTGGCCAGCTGCCC
GATTTTGCTATGGAATAGAAACAATTGAAAATCCAAGTTAATCATCACAACATTTTCAGATTTG
CTTAATTGGAAAAATATAGCTAAAGTACCTGTTGCAATGTGGCAGAAGATGAAACTCCAGGGAC
TGGGAGAGGGTTAAGGGGAGGAACACCATAACCACCTAACGGGCCACCCTAACAATATAGAATG
TTACATTTAAAAAAGCTCACATCAGGGCTAGAAATTATTCAAAAAAAAAATTGCCTCAGTAACT
GACAAACTGCAAATTAAGGCCATATCATTTGAGCAACACACATCGTGTTTGTTGCATTATATGA
AAAGTTGAAAGGTCAGAACTTCATGCTTCTTTTCACCTGTCATAAGCCCATGTGTGCAGTATAT
GAAGTACTTTCTTTTTATTTGTCTCGCACAATACATGCAAACTCTATGCGCTTACTTATATGAA
TGTGCAGATTTAAGATGATATACATGATCATCAACCTGTTCTCACCTGATTTGAAGGCAATGTT
GCTTGACCTGGTTTAGGGGAAAAGTCACTACCGGCACCACGGATCCCAGTGTTACTAGGTGGGC
CTACGTTTCGTGAAGTAGCTGGACGCCAAGGATTTGTGTGGCTTACATCCCCACTAGAGTCACC
AAAGTTAGAGGTAGGCCTAACAAATAGAGATGAGGAGACCGGGGTAAGTCAACATATATAATTA
CCTAATGAGCATAATCATGATCTCCTTTCACACCAGTTACCTTGGTCCTGAAGCTTGAAAACGA
GGCCCTGAACCAAGTCCAACAGGAGGTGCCATTTCCCTGGAAACAGAAACTACTTAAGGATATC
TAGAAAGCAATGCTTCACATTCCAGTAATAACTGGAGAAGGAACAGGGTTCCCAACTCTCCACC
ATGTCCAAAAGATTCTCCACAAATATAACTCAGACAGAACAAAGAATGAAGGTATATACAATTT
ACTTGATAAGAGTATTAGGATTAATCAAAATATAGTACCCAAGGCATTACCTTGACTCGCCAGG
TTTAGGCCTCTTTGGCTCAGCAAACCGAACAATCAATGGCTGATTGCAACCCTGGGGAAAGGAT
AGAGGCCAGTAAACAAAACAGGTCCAAAGGGTGATAATGAGAGAAACTGAGATACTTATGTGAT
TCACAGCTTACTCTCATGGTATAAGTTCCGTTGAGACCATCGATAGCTGCCATTGCCGTCTCTT
TGCTTGAATATTTAACAAACCCACATCCTACAAAGTGAAAAACACAGTTTCACCATCTCAACAT
CATCACACAACAAATAATTTATAGAATCTAGTACAAATTACAAAACATACCACGACTCTGTCTA
TATTCATCCCGCATGAGATAGACATCTTCCACATGACCAAATTGTAAAAAGATCTGTTAAAGCA
ATAACAATAAAACAGTTTGTTAAAAGATTACATGAGAAATTGAAACACATAAGTTGAACTGGGA
AGGTAGCCGTTCACATTTATTAATTTTATCTATTATGACAGTCAAACAGTTGGATCAATTGGAA
GAAGAGATTACACAGTAAGTAGAATGTCCAAGCGCTTGCATTATTGACACAGATTTTCTAGACA
CTCACCCTTTGGTAAGACTAACAAAATTTATCAAAGAGTCATTTAAAATTATCAACTCAGGTAA
CAGGGGACACAATAATATCCAAGTTTAGAACTCTTCCCTGTTCCGTTAATCTGACATAAGTAAC
AACTTCAAAAAGTAAGATACGAAACATACCTCCTCAACTTCTTTTTCAGTGGCTTGCTTGTTTA
GTGAACCAACAAAAAGCTTAAACTCTAGGGTGCCTTCAGAAGAAGAGAACTATATCACTTGATA
GTAAGGCAAAGAAAACAGGGAAAGAAAAGGATCAACATCCATAAAGTTCATATCATTTCCCACA
TTTTCTTAATTTTTGTAATCTGAACTTATGCAGCGTATGGTCTTGGCTATGAACACTAGACAAT
GACAGCCACATTAGATACTCTGTGTGGAAGTTGATTACCTATGCGTTCTCTCTCCCCGTCAGCA
TATCGAACTTGAACAGGACCAGTTCCCTGGGAATCAACAAAATTATAAAAGGTGAAACAACCTA
TAGTTTCCTGTTCTTGATAAGAGAAAGCCTCAGGGTAATTACCCCAGGAAGAGTGATCTGATTG
TGCAGTGCTCTGATGGCTCTATCCGCATCTTTCGAAGTTGCATATTTTACAAAACAACAGC
						
					

			
		

Sequences
Splice junction sequence	AGCCTCAGGGTAATTACCCCAGGAAGAGTGATCTGATTGTGCAGTGCTCTGATGGCTCTATCCG CATCTTTCGAAGTTGCATATTTTACAAAACAACAGCctcaagctttattcttccacatgagttc ttggggagattgacggctctgggaaaaagagatatgattgtaaagagaattaaggaaaaaaacg gtttcaac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1761 Transcript exons: 9207163-9207208,9207341-9207406,9207590-9207622,9207792- 9207824,9208011-9208043,9208135-9208314,9208469-9208648, 9208814-9209281,9209367-9209450,9209768-9209930,9210019- 9210078,9210285-9210349,9210438-9210517,9210605-9210671, 9211032-9211099,9211297-9211348,9211429-9211511 CTCAAGCTTTATTCTTCCACATGAGTTCTTGGGGAGATTGACGGCTCTGTTGAGTTCTTGATAT ATCATTCATTGAAGCAGCTCCCACGGGTATATGTGTCCGAGCATAATCCTGAGCATTCTGACCA ATTCCTGACATAGGAAACTGGCTATTTTGACCTACTGGCAATGATGGATACTGAGTATTATGGC TGGCCCCTGGAGTTGGATACAGTGAAGAATAAAACGGCTGCTGTAATTGCTGGCCCTGATATTG CTGCTGAACTTGTTGTGGTTGTTGCTGCAACGGCTGTAATTGGGTCTGGGACTGCTGTATAGTT GGCTTCTCTTGATGTTGTTGCTGTTTCTGTTGCTCTCGTTCGAACACTATCATTTCCTCAGGTT TTTCCCACTTGCTTTCACCCGTTAGACCATTGTAATAATATTTAAATCCATCAGGCGAGGTATG CTCGGTCCAGGTACATTTGACAGAACCTACGCTCTGACTTACTGCAGGTGCAGCTGTTTGCACA TAGCTCACTGGTGTCGAACCAGTGGTGCTAGCCACTCTTGGAATTGCAGATCCAGCCCACTGTT GTTTACCAGCTCGGCCATTCTGTGAGAGTGGTAAATTTTGGTTTGGTTGCTGCATAGACTGCAC CTGCTGCTGCAGCTGAGAAATTGCTTGCTGAGACGATTGGAATGTTGCTTGTAGACTCTGAGTT TGCTGCGACAAGAGCTGAGCTAGCTCAGAAGGAGGATGTTGCATCTTTTGTAGCGGTTGCTGCT GGGAACGAGGGGGAAATTGAACAGTTGCAGAAGACACAGTTGTTGGCCGTAGATTAATGTTCAA AGGAGTTTGAGGAGCAGTTGCACGACTGATGTTTTGCTGTGGTGGCAGCTGAGAGGTAGGCAAC TGGCTGCTATAAGCATAAGGATTCTGCAAGGGTGCCTGGGCCCCAGGGAAATTAGTTTGCGGAC GGAGGGGGAGAGGGAGACCCTGTGGACTGTGAAGAGGTTTTTTTAATGGTGTTATATGCTGGCC AGCTGCCCGATTTTGCTGTTGCAATGTGGCAGAAGATGAAACTCCAGGGACTGGGAGAGGGTTA AGGGGAGGAACACCATAACCACCTAACGGGCCACCCTGATTTGAAGGCAATGTTGCTTGACCTG GTTTAGGGGAAAAGTCACTACCGGCACCACGGATCCCAGTGTTACTAGGTGGGCCTACGTTTCG TGAAGTAGCTGGACGCCAAGGATTTGTGTGGCTTACATCCCCACTAGAGTCACCAAAGTTAGAG GTAGGCCTTGGTCCTGAAGCTTGAAAACGAGGCCCTGAACCAAGTCCAACAGGAGGTGCCATTT CCCTTGACTCGCCAGGTTTAGGCCTCTTTGGCTCAGCAAACCGAACAATCAATGGCTGATTGCA ACCTCTCATGGTATAAGTTCCGTTGAGACCATCGATAGCTGCCATTGCCGTCTCTTTGCTTGAA TATTTAACAAACCCACATCCACGACTCTGTCTATATTCATCCCGCATGAGATAGACATCTTCCA CATGACCAAATTGTAAAAAGATCTCCTCAACTTCTTTTTCAGTGGCTTGCTTGTTTAGTGAACC AACAAAAAGCTTAAACTCTAGGGTGCCTATGCGTTCTCTCTCCCCGTCAGCATATCGAACTTGA ACAGGACCAGTTCCCCCAGGAAGAGTGATCTGATTGTGCAGTGCTCTGATGGCTCTATCCGCAT CTTTCGAAGTTGCATATTTTACAAAACAACAGC
Genomic sequence	CTCAAGCTTTATTCTTCCACATGAGTTCTTGGGGAGATTGACGGCTCTGGGAAAAAGAGATATG ATTGTAAAGAGAATTAAGGAAAAAAACGGTTTCAACGAAAAAGAACATCTGAATACCAAAGGAC GAATTATGAACAGAGAGAAGTTCTGAATCACTGATAAAAACCATAACTACCTGTTGAGTTCTTG ATATATCATTCATTGAAGCAGCTCCCACGGGTATATGTGTCCGAGCATAATCCTAGACAATCCA AACAGAATAGAAAATAAGCTCTGCCTAAACCATTTTTAACCAAGGAAGGAAGTCATATCACTGA TGTTTCTTTTTAAAATGACATTAAATCCAAGAACTCATTATGTTCTGTGATTAAATTCAAAGGT ACAGAAGGTATGGGAAATTGTTAATACAAAATGAGATATATACCTGAGCATTCTGACCAATTCC TGACATAGGAAACTGCATTTTCCAGAAAAGAAAAAAAGATTTTCAACCAGAGAATATACGAATC AGATGAAGTTTTTGTTATTCTGATATGTTACAAAAACTACGCATCAGAGGAAGTCAATGTTGTA ACTGAGAATCAATCAGTTCAATGAAAAATAAGTCCACAGATTCAGATATGTACCTGGCTATTTT GACCTACTGGCAATGATGGATACTGCATTTTAGAAAGGAAAATAGGCATTCACGTTAGAGATTT GTTATCTGTATTTCAAAATGCTGGCAAAACCATGGCTACTGAATTTTACTTTAAGGTGGTCAAT CTCCTTCTACCACAAGATTAGCATATCAAGAATCAAATCTTGAAATGAAAAATAAGTAAACAGA TTAAACAGATATACACCTGAGTATTATGGCTGGCCCCTGGAGTTGGATACTGCAACTCCAAATG AACAAGAGTAAATATGCAAATTAGAAACCATGTGACAAAAATATTTGAATGTAACCAGCATGAA AACGAAACCAACCAGTGAAGAATAAAACGGCTGCTGTAATTGCTGGCCCTGATATTGCTGCTGA ACTTGTTGTGGTTGTTGCTGCAACGGCTGTAATTGGGTCTGGGACTGCTGTATAGTTGGCTTCT CTTGATGTTGTTGCTGTTTCTGTTGCTCTCGTTCGAACACTATCATTTCCTCAGGTTTTTCCCA CTGCAAAAGTGAATTATATACATAATATGGCACGTACTGAAGGACTTCAAATATAAAATATACA TGTGTAAGGATTATCAATAGCACAATAAACCAGGAGGAATACTCCTGAAACTCACAAGGAAATA TATTAAAGAGGAACCACGTTTCTCACCTTGCTTTCACCCGTTAGACCATTGTAATAATATTTAA ATCCATCAGGCGAGGTATGCTCGGTCCAGGTACATTTGACAGAACCTACGCTCTGACTTACTGC AGGTGCAGCTGTTTGCACATAGCTCACTGGTGTCGAACCAGTGGTGCTAGCCACTCTTGGAATT GCAGATCCAGCCCACTGATAAAGAAGCAGCCGAGAGGAACATTAGAAAAGGGGAGAATACTAAA ACACATGAAGGATAAAAAACGGGATGTCTATCAGGAAATAATTTTAAGTTAAAACAACACAATA GCAGCTGAAGAACCCGTCTGGGCAGATGCAACTGAGAGACTATATTCATACCTGTTGTTTACCA GCTCGGCCATTCTGTGAGAGTGGTAAATTTTGGTTTGGTTGCTGCATAGACTGCACCTGCTGCT GCAGCTGAGAAATTGCTTGCTGAGACGATTGGAATGTTGCTTGTAGACTCTGAGTTTGCTGCGA CAAGAGCTGAGCTAGCTCAGAAGGAGGATGTTGCATCTTTTGTAGCGGTTGCTGCTGGGAACGA GGGGGAAATTGAACAGTTGCAGAAGACACAGTTGTTGGCCGTAGATTAATGTTCAAAGGAGTTT GAGGAGCAGTTGCACGACTGATGTTTTGCTGTGGTGGCAGCTGAGAGGTAGGCAACTGGCTGCT ATAAGCATAAGGATTCTGCAAGGGTGCCTGGGCCCCAGGGAAATTAGTTTGCGGACGGAGGGGG AGAGGGAGACCCTGTGGACTGTGAAGAGGTTTTTTTAATGGTGTTATATGCTGGCCAGCTGCCC GATTTTGCTATGGAATAGAAACAATTGAAAATCCAAGTTAATCATCACAACATTTTCAGATTTG CTTAATTGGAAAAATATAGCTAAAGTACCTGTTGCAATGTGGCAGAAGATGAAACTCCAGGGAC TGGGAGAGGGTTAAGGGGAGGAACACCATAACCACCTAACGGGCCACCCTAACAATATAGAATG TTACATTTAAAAAAGCTCACATCAGGGCTAGAAATTATTCAAAAAAAAAATTGCCTCAGTAACT GACAAACTGCAAATTAAGGCCATATCATTTGAGCAACACACATCGTGTTTGTTGCATTATATGA AAAGTTGAAAGGTCAGAACTTCATGCTTCTTTTCACCTGTCATAAGCCCATGTGTGCAGTATAT GAAGTACTTTCTTTTTATTTGTCTCGCACAATACATGCAAACTCTATGCGCTTACTTATATGAA TGTGCAGATTTAAGATGATATACATGATCATCAACCTGTTCTCACCTGATTTGAAGGCAATGTT GCTTGACCTGGTTTAGGGGAAAAGTCACTACCGGCACCACGGATCCCAGTGTTACTAGGTGGGC CTACGTTTCGTGAAGTAGCTGGACGCCAAGGATTTGTGTGGCTTACATCCCCACTAGAGTCACC AAAGTTAGAGGTAGGCCTAACAAATAGAGATGAGGAGACCGGGGTAAGTCAACATATATAATTA CCTAATGAGCATAATCATGATCTCCTTTCACACCAGTTACCTTGGTCCTGAAGCTTGAAAACGA GGCCCTGAACCAAGTCCAACAGGAGGTGCCATTTCCCTGGAAACAGAAACTACTTAAGGATATC TAGAAAGCAATGCTTCACATTCCAGTAATAACTGGAGAAGGAACAGGGTTCCCAACTCTCCACC ATGTCCAAAAGATTCTCCACAAATATAACTCAGACAGAACAAAGAATGAAGGTATATACAATTT ACTTGATAAGAGTATTAGGATTAATCAAAATATAGTACCCAAGGCATTACCTTGACTCGCCAGG TTTAGGCCTCTTTGGCTCAGCAAACCGAACAATCAATGGCTGATTGCAACCCTGGGGAAAGGAT AGAGGCCAGTAAACAAAACAGGTCCAAAGGGTGATAATGAGAGAAACTGAGATACTTATGTGAT TCACAGCTTACTCTCATGGTATAAGTTCCGTTGAGACCATCGATAGCTGCCATTGCCGTCTCTT TGCTTGAATATTTAACAAACCCACATCCTACAAAGTGAAAAACACAGTTTCACCATCTCAACAT CATCACACAACAAATAATTTATAGAATCTAGTACAAATTACAAAACATACCACGACTCTGTCTA TATTCATCCCGCATGAGATAGACATCTTCCACATGACCAAATTGTAAAAAGATCTGTTAAAGCA ATAACAATAAAACAGTTTGTTAAAAGATTACATGAGAAATTGAAACACATAAGTTGAACTGGGA AGGTAGCCGTTCACATTTATTAATTTTATCTATTATGACAGTCAAACAGTTGGATCAATTGGAA GAAGAGATTACACAGTAAGTAGAATGTCCAAGCGCTTGCATTATTGACACAGATTTTCTAGACA CTCACCCTTTGGTAAGACTAACAAAATTTATCAAAGAGTCATTTAAAATTATCAACTCAGGTAA CAGGGGACACAATAATATCCAAGTTTAGAACTCTTCCCTGTTCCGTTAATCTGACATAAGTAAC AACTTCAAAAAGTAAGATACGAAACATACCTCCTCAACTTCTTTTTCAGTGGCTTGCTTGTTTA GTGAACCAACAAAAAGCTTAAACTCTAGGGTGCCTTCAGAAGAAGAGAACTATATCACTTGATA GTAAGGCAAAGAAAACAGGGAAAGAAAAGGATCAACATCCATAAAGTTCATATCATTTCCCACA TTTTCTTAATTTTTGTAATCTGAACTTATGCAGCGTATGGTCTTGGCTATGAACACTAGACAAT GACAGCCACATTAGATACTCTGTGTGGAAGTTGATTACCTATGCGTTCTCTCTCCCCGTCAGCA TATCGAACTTGAACAGGACCAGTTCCCTGGGAATCAACAAAATTATAAAAGGTGAAACAACCTA TAGTTTCCTGTTCTTGATAAGAGAAAGCCTCAGGGTAATTACCCCAGGAAGAGTGATCTGATTG TGCAGTGCTCTGATGGCTCTATCCGCATCTTTCGAAGTTGCATATTTTACAAAACAACAGC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.191667924

Conservation Information
Conserved circRNAs	NA
PMCS	0.191667924

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						response to drought stress; regulation of development and senescence of leaves

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	response to drought stress; regulation of development and senescence of leaves

			
						 Other Information
					
						References
						Chu et al., 2017;Liu et al., 2017;Zhang et al., 2019

circRNA

Detail information of AT4G16280_circ_g.3

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