Detail information of AT2G04755_circ_g.3


General Information
CircRNA Name AT2G04755_circ_g.3
ID in PlantcircBase ath_circ_012772
Alias NA
Organism Arabidpsis thaliana
Position chr2: 1481395-1481502  JBrowse»
Reference genome TAIR10.38
Type   e-circRNA
Identification method circRNA_finder
Parent gene AT2G04280
Parent gene annotation At2g04280
Parent gene strand -
Alternative splicing AT2G04755_circ_g.1 AT2G04755_circ_g.2
Support reads 2
Tissues aerial
Exon boundary   No-No
Splicing signals   CT-AC
Number of exons covered AT2G04280.1:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   TCTTCCCATCTCTAGGCCTATAACGCCACGCCATATCACAAGAATTCACACCTTaattctcaga
cttagcaacaacaaacctcctataatccttataaaaagcagcac
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence AATTCTCAGACTTAGCAACAACAAACCTCCTATAATCCTTATAAAAAGCAGCACTCTTCCCATC
TCTAGGCCTATAACGCCACGCCATATCACAAGAATTCACACCTT
Conservation Information
Conserved circRNAs NA
PMCS 0.32639599
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Chu et al., 2017