Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os11g0158666_circ_g.1 |
ID in PlantcircBase | osa_circ_008523 |
Alias | Os11circ00881 |
Organism | Oryza sativa |
Position | chr11: 2840945-2841327 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ei-circRNA |
Identification method | CIRCexplorer, SMALT, Segemehl, circseq_cup |
Parent gene | Os11g0158666 |
Parent gene annotation |
Hypothetical protein. (Os11t0158666-00) |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2/2/8 |
Tissues | leaf/root/shoot, root |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Os11t0158600-00:1 Os11t0158600-00:1 Os11t0158666-00:1 |
Conservation Information | |
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Conserved circRNAs |
osi_circ_009264 osi_circ_010097 osi_circ_005081 osi_circ_013590 zma_circ_006918* zma_circ_000876 |
PMCS | 0.412301741 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Lu et al., 2015;Ye et al., 2016;Chu et al., 2017 |