Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d016827_circ_g.4 |
ID in PlantcircBase | zma_circ_008723 |
Alias | zma_circ_0001926, GRMZM2G337749_C2 |
Organism | Zea mays |
Position | chr5: 177544980-177546112 JBrowse» |
Reference genome | AGPv4.38 |
Type | u-circRNA |
Identification method | find_circ, CIRI2 |
Parent gene | Zm00001d016827 |
Parent gene annotation |
DDT domain-containing protein |
Parent gene strand | - |
Alternative splicing | Zm00001d016827_circ_g.1 Zm00001d016827_circ_g.2 Zm00001d016827_circ_g.3 |
Support reads | NA |
Tissues | leaf, root |
Exon boundary | Yes-No |
Splicing signals | CT-AC |
Number of exons covered | Zm00001d016827_T004:4 Zm00001d016827_T003:3 Zm00001d016827_T002:3 Zm00001d016827_T001:4 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.099925548 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | responsive to drought stress |
Other Information | |
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References | Ma et al., 2021b;Zhang et al., 2019 |