Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA003155_circ_g.14 |
ID in PlantcircBase | osi_circ_011462 |
Alias | Chr01:8470905_8471092(MH63RS2), Chr01:8279634_8279821(ZS97RS2) |
Organism | Oryza sativa ssp. indica |
Position | chr1: 9114345-9114532 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | e-circRNA |
Identification method | CIRI2, find_circ, find_circ |
Parent gene | BGIOSGA003155 |
Parent gene annotation | NA |
Parent gene strand | + |
Alternative splicing | BGIOSGA003155_circ_g.1 BGIOSGA003155_circ_g.2 BGIOSGA003155_circ_g.3 BGIOSGA003155_circ_g.4 BGIOSGA003155_circ_g.5 BGIOSGA003155_circ_g.6 BGIOSGA003155_circ_g.7 BGIOSGA003155_circ_g.8 BGIOSGA003155_circ_g.9 BGIOSGA003155_circ_g.10 BGIOSGA003155_circ_g.11 BGIOSGA003155_circ_g.12 BGIOSGA003155_circ_g.13 |
Support reads | NA |
Tissues | root, leaf, panicle |
Exon boundary | No-No |
Splicing signals | GT-GA |
Number of exons covered | BGIOSGA003155-TA:1 |
Conservation Information | |
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Conserved circRNAs |
osa_circ_001103 osa_circ_001102 osa_circ_001101 osa_circ_001098 osa_circ_001096 osa_circ_001095 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2021 |