Plant Circular RNA Database

Detail information of BGIOSGA008766_circ_g.1

			
						 General Information
					
						CircRNA Name
						BGIOSGA008766_circ_g.1
					
						ID in PlantcircBase
						osi_circ_004156
					
						Alias
						2:28691055|28695942
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr2: 28691055-28695942  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA008766						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA008766-TA:10

General Information
CircRNA Name	BGIOSGA008766_circ_g.1
ID in PlantcircBase	osi_circ_004156
Alias	2:28691055\|28695942
Organism	Oryza sativa ssp. indica
Position	chr2: 28691055-28695942 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA008766
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	NA
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA008766-TA:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ACAAGAGGCTGAAGAAAGTTCTCGTTTTGTTCACAAACTTGGGTTGTATAAACTCCAGTGTTGC
CTATTGATGAATGGACTTGTGCATGAATCAAGCGAGgaacgcaaaccagcgttaaatgctgaga
taatgtccttcagggattatctgttgtcatcgacagtatctgacacacttgaagtatgggaact
caaaggta

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GAACGCAAACCAGCGTTAAATGCTGAGATAATGTCCTTCAGGGATTATCTGTTGTCATCGACAG
TATCTGACACACTTGAAGTATGGGAACTCAAAGGTAGTGTTGTGATAAGCTGATGAGCATTCCT
GACACTTCCTCATGATTCTATTTTTATTCCAATGTTTTGTTATTCAATGGTATAAGAGTGCCTT
TTTAATTTGTGATAATCTCCATACTGCAGACTTGGGTCATCAGACAGCGCAGAGAATCCTCCAT
GCATCGGATCCTTTACAGTCAATGCAGGAAATTAATCAAAATTTCCCCAGTATAGTTTCATCAC
TGTCACGGATGAAGGTGGATGCTTTTTCTGAGCTCACTTTAGATGTCTAGATGTGCTCATAAGC
AATGAACTGTTGGTTATATATATGTTTTGTTGGGGAGATGAAAATTTTGTTTTTGAATACATTC
GTATGAACTATTTCTGCATGAAGAATATTACTGACGATTTCATGTTTGTACAGCTTGACGATTC
AATCAAGGATGAAATAATTGCAAATCAGCGAATGGTTCCACCTGGCAAGTCATTGATGGCTTTG
AATGGTGCTTTGATTAATATTGAGGATCTCGATCTTTACCTGTATGTTACACTGTATTTCCGAG
ATAACAATGTTTCTGATTATTTAATATGTTTTCCCACTTTCATTAGCCAAGTAAATTAGCAGAT
TTCTTCTTGTCTGATGCACACCAAGTTGATTATTTCCTTCACACTTGGTTTTGGTGTGAATCAC
TGTATTCTATAACACTTTGCAATTAACTCCTCTACACCACCTGTTGTTAGAAAACATGCTACAG
AGCAAATGGTAACTGTAAACCTACGACGAAATGATATTCTACAATTCAACAGCTGCCTGTAGAG
ATTGTTGACAAGAATAATAACACAATACAGCTTTTATATGGTGTTAGTCATTTGATGCATAAGA
AGATAAAAGTCCAATCAGTTTTATAGTTGCGCATGTTGCAAATATTCAGTGCATCACATTGTTT
GAGAGTTTTCTCCTCAATCTGTTTGCTCATATAGGCCATACAGATTTTTATTTGTCTGGACATA
ATAATTTGGTATTTATCCTGTTTCTCACATTTCCCGAACACTAAATTTGCATATTTAACTAATA
GAGCACACATTTCCGGGAACCTGATTCTGTTTTGCTAACTTTAGTAATTCATCTATCTTAAAAT
TGTTACCAGATTTCTGACTAATATCATACTCTATTTAACTAATAGAGTACACATTTGATTCTGG
TTTGTCTGACAGGTTGATGGATATGGTCCATGAGGAATTATCTCTTGCTGATCAGTTTGTCAAA
CTAAAGGTGAATTTTGATAAATGTGCTATTAAACATGTTTAATGGGTTGTCCTTGGCTCCTTCC
AAGAGATTTACTTTTGATGGTTGTTCCTCTTAACATCCGAGTTATGAGGAATGCATGAACACCT
GTCTACCAGTGTTGATAATTCGAACCTGTTGGAAAAAAAAAACTAGTTTGACAACTTTTGGTGA
AATGCAACGCCTAAGTGTGAAATGTTGTATAACTGCAGAATACACCAGATTGATGATATTTCTT
GGTTATACTCAAATAACATATTTGTTTCTAATTGCTTTTTTTATGATAAATGTTATTTAAGTTC
TTAATCTCTTACAATGTTGGATATTTATGGTGTGGACTGTCAAGTTGTGAAATCCTGCACCAAA
CATATTTCCCTAAAAACTATTATTTTCTTTTGTTTCATTTGTTTATAGGGAATACATTTTTATT
TACTTTCTTATGAGGTGTAACTTATTTCGTAATTAATTTCAAATGCCTACCAGATTCCTGGAAG
TGCTGTCCACAAGATCCTGTCAGCTGCTCCACCAACAGAATCTAACTCGTTCCGTGTTGACTTC
CGGTCTTCCCATGTTCATTATCTTAATAACTTGGAGGAAGATGCGTTATATAAAAGGTGGAGAA
GCAACATCAATGAGGTTTTGTTCTTTTCTCTTTTTTATTAACACCATTGAAATAAGATTGTCAT
TAGAATGTTGCTTTGCTGTGCCAAGTCAAATGAGGGACTACAACCTTCTATTTCCAAGGCTTTA
GGAATTACTAGAGAACTAAGAATATATCCTTATACTCATTACTCCCTCCGTCCCACAATAGTTG
TCTTTCTAGGTTGATTAGCATAGATTAAGATTTGAGAAGAAAAGACTATAATACCCCTTATTTG
AATGGGAGTTGGAGGATGTGCAAGGGTAAAAAGAGAAGAAATTTGAATAGGAGATGATTGATGG
GACTGCTATTACTCAAAAGTGACACCTATTTGGGACATATTTTGTATCCTAGAAAGACAACTAT
TTTGGGACGAAGGAAGTATGAAATAGATATCTTGCTTGACAACACTGATATCCTGTTTTGGTAT
GATAGGTTCACTATTAATTCTCAAGCTTAGCTTTCCATGGCTGATATATGTCAACAGTATATCT
TAATGTTTTTTAGTTTGTACTACTACAAAAGTTCACGTTTACCATACATGTGAAATCTAAATAT
TAGTGGTTTTGCATATGCTATTCAACATTGGTTGCTTGTGTTTTCTTTTCTGCATTTTCTCGTT
TTCAAGAAAATTGTATGACGCAACTATACCAACCTTAATTAATTACTTTTACTTACTAATTTTT
TCTTCTTCCTTTGCAGCTATTGATGCCAGTCTTCCCTGGTCAGATGCGCTACATCCGCAAAAAT
CTATTCCATGCTGTTTATGTGTTTGATCCTGCTTCAGTCTGTGGTGCAGAGGCTAGTCTCTTTC
TTACCTTCCAGTTTTATGTTTTTGTCTTTTTAACCTGGAGCCTTTTTCTAACTGGGTGTCCTGT
TGCCATTTCTCTTTAAATCTTTACAGACCATTGACATGGTTCTATCTCTATACCAAGATAGTGT
CCCTATAAGGTTTGGCATTATATTGTATTCTTCAAGGCTTATTAGTGTTATTGAAGAAAATGAT
GGCAATCTTCCAGTAAATAATGGGTCTAAGACTGAGGAGGATATTTCTATTTTGGTAATCATTT
TTTTTAATTTACTTTGAATTCTTGAGATCATTGTTTGATGTGTAGAGCATGAAACTGGTATTGC
ATTATAATTACTTGAGTTATTTACCTTATATTTTCATTAAATACTACTAATGCTCGAAGGAATC
AAGTGTACATTACATTATACAATATTAAAGGGGCGTCCTATATTTAATGTAATACACATTTTAT
GTTAGTCTGATGCCTATGTGGTCCTTTTTCTTTTTTCCTGTTGATAAATAAACATTTACATACC
GTGTCCTTGCAACCTACATGTTCTGGTAGTTCCATTTTTCGTGACTTACCATTATGTACATATG
TGGTGCACACGACCCATGTTTTCTATTGATAGGACGATTCACAGCATAATAAGATTATAATTTT
AGGGATTCCTAGTAACAGTATATTGCAATTAGTAGGTCCATGTAATTATTCTGAACTGGAAGGG
ATACACAGCAGCAGAAGATTACAGTTAGTATGTCCTATGTACTATTTTAAACTATAAGGGGTAT
GAACATAAGAAAGGGAAATCTATGAATATGCGTCATCGTACAATATGATGCAGCACATTTCCTA
GTGGTCTTGACTAGTGAGATGGATTATAACCTTAATTGCCTCATAAAAGGAATTGATGCACCAT
GTTTCCCTTTTTGCAGATAATAAGGCTATTCCTGTACATCAAGGAAACATACTCAACGCAGTTG
GCATACCAGTTCCTAAGCAATGTGAGTGCACATAACATATTTGATTTGCTATTTATAAACTAGA
AAATTCAGCTTGAGTGGATATGGTGGCAAAAGAAGGAAACGTGTATCTTTCAATACTTGAATAT
ATCTTTTTTCTGTATGCTAGACCAATTTCATGTCTAAAAGAATTTGAGCTTTGGCATATTTTCT
CTTCTTTTTGGCATAAAATACAGTGCTTCTGTTAGTTTTCATCATCCTCTCTGCCTTGTGCCTT
CCATGAGTGATGACATTTGTGTTAAGTTTTGTGCTAAGCTTATTGTGGTGTAAAAAATCATTGC
AAACTGTTCATCATAATTGTCAGAGCTTAAAAACATGTGGAAGAGGTGTCTGCTAGACTTTTAA
TTTTGCTGAACAACCCTTTCACCAATTTTTCATCTGAAGTAAAAGTTGAGATTTGTTTTATATA
TCCTTTCATGATTAGTTCTCTTTCTTTCTTTTTTGTTTCTTCGGAAAATTGATAATGGTTGATG
GAATTACATGTCTGACATGGCTCTAAGAAATTGGAATGTAGTGGCATTTGTCTATTGTTATGTT
GCATATTGATCCTTGAATAATATTGCTCAGGTGGGCATGTTACAGTTTCCATCTAAAATATCAC
TAGTGAAATCATGATCATGTTCTTTACGTTATATTTGCTATTTAATTGTCTTGCCAATCTGTGC
ACACTCTAGATGTTCTTCGTTTCCTATAGTTCTAATCCTTGTGATATTTTCTTCTCCAGATACA
TAAATCACAGAACAGTGGTGATGACTATAATGAAGAGTCTGTGGAAGCTCATCATGTTGAAGGG
GCATTTGTTGATTCCTTATTGTAAGCTCATTCACTGAATTCAATATTTTGTTGGAGATAATTGT
TCAAATATATTTAACATGTTTTCCTTGTTCTACTAATATTTGGTAATGTACAGGTCAAGTGCTA
AATCTCACCCTCAAGATGTGCTGCTAAAGTTGCAAAAAGAGAACATGCACAAACAAGAGGCTGA
AGAAAGTTCTCGTTTTGTTCACAAACTTGGGTTGTATAAACTCCAGTGTTGCCTATTGATGAAT
GGACTTGTGCATGAATCAAGCGAG
						
					

			
		

Sequences
Splice junction sequence	ACAAGAGGCTGAAGAAAGTTCTCGTTTTGTTCACAAACTTGGGTTGTATAAACTCCAGTGTTGC CTATTGATGAATGGACTTGTGCATGAATCAAGCGAGgaacgcaaaccagcgttaaatgctgaga taatgtccttcagggattatctgttgtcatcgacagtatctgacacacttgaagtatgggaact caaaggta
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GAACGCAAACCAGCGTTAAATGCTGAGATAATGTCCTTCAGGGATTATCTGTTGTCATCGACAG TATCTGACACACTTGAAGTATGGGAACTCAAAGGTAGTGTTGTGATAAGCTGATGAGCATTCCT GACACTTCCTCATGATTCTATTTTTATTCCAATGTTTTGTTATTCAATGGTATAAGAGTGCCTT TTTAATTTGTGATAATCTCCATACTGCAGACTTGGGTCATCAGACAGCGCAGAGAATCCTCCAT GCATCGGATCCTTTACAGTCAATGCAGGAAATTAATCAAAATTTCCCCAGTATAGTTTCATCAC TGTCACGGATGAAGGTGGATGCTTTTTCTGAGCTCACTTTAGATGTCTAGATGTGCTCATAAGC AATGAACTGTTGGTTATATATATGTTTTGTTGGGGAGATGAAAATTTTGTTTTTGAATACATTC GTATGAACTATTTCTGCATGAAGAATATTACTGACGATTTCATGTTTGTACAGCTTGACGATTC AATCAAGGATGAAATAATTGCAAATCAGCGAATGGTTCCACCTGGCAAGTCATTGATGGCTTTG AATGGTGCTTTGATTAATATTGAGGATCTCGATCTTTACCTGTATGTTACACTGTATTTCCGAG ATAACAATGTTTCTGATTATTTAATATGTTTTCCCACTTTCATTAGCCAAGTAAATTAGCAGAT TTCTTCTTGTCTGATGCACACCAAGTTGATTATTTCCTTCACACTTGGTTTTGGTGTGAATCAC TGTATTCTATAACACTTTGCAATTAACTCCTCTACACCACCTGTTGTTAGAAAACATGCTACAG AGCAAATGGTAACTGTAAACCTACGACGAAATGATATTCTACAATTCAACAGCTGCCTGTAGAG ATTGTTGACAAGAATAATAACACAATACAGCTTTTATATGGTGTTAGTCATTTGATGCATAAGA AGATAAAAGTCCAATCAGTTTTATAGTTGCGCATGTTGCAAATATTCAGTGCATCACATTGTTT GAGAGTTTTCTCCTCAATCTGTTTGCTCATATAGGCCATACAGATTTTTATTTGTCTGGACATA ATAATTTGGTATTTATCCTGTTTCTCACATTTCCCGAACACTAAATTTGCATATTTAACTAATA GAGCACACATTTCCGGGAACCTGATTCTGTTTTGCTAACTTTAGTAATTCATCTATCTTAAAAT TGTTACCAGATTTCTGACTAATATCATACTCTATTTAACTAATAGAGTACACATTTGATTCTGG TTTGTCTGACAGGTTGATGGATATGGTCCATGAGGAATTATCTCTTGCTGATCAGTTTGTCAAA CTAAAGGTGAATTTTGATAAATGTGCTATTAAACATGTTTAATGGGTTGTCCTTGGCTCCTTCC AAGAGATTTACTTTTGATGGTTGTTCCTCTTAACATCCGAGTTATGAGGAATGCATGAACACCT GTCTACCAGTGTTGATAATTCGAACCTGTTGGAAAAAAAAAACTAGTTTGACAACTTTTGGTGA AATGCAACGCCTAAGTGTGAAATGTTGTATAACTGCAGAATACACCAGATTGATGATATTTCTT GGTTATACTCAAATAACATATTTGTTTCTAATTGCTTTTTTTATGATAAATGTTATTTAAGTTC TTAATCTCTTACAATGTTGGATATTTATGGTGTGGACTGTCAAGTTGTGAAATCCTGCACCAAA CATATTTCCCTAAAAACTATTATTTTCTTTTGTTTCATTTGTTTATAGGGAATACATTTTTATT TACTTTCTTATGAGGTGTAACTTATTTCGTAATTAATTTCAAATGCCTACCAGATTCCTGGAAG TGCTGTCCACAAGATCCTGTCAGCTGCTCCACCAACAGAATCTAACTCGTTCCGTGTTGACTTC CGGTCTTCCCATGTTCATTATCTTAATAACTTGGAGGAAGATGCGTTATATAAAAGGTGGAGAA GCAACATCAATGAGGTTTTGTTCTTTTCTCTTTTTTATTAACACCATTGAAATAAGATTGTCAT TAGAATGTTGCTTTGCTGTGCCAAGTCAAATGAGGGACTACAACCTTCTATTTCCAAGGCTTTA GGAATTACTAGAGAACTAAGAATATATCCTTATACTCATTACTCCCTCCGTCCCACAATAGTTG TCTTTCTAGGTTGATTAGCATAGATTAAGATTTGAGAAGAAAAGACTATAATACCCCTTATTTG AATGGGAGTTGGAGGATGTGCAAGGGTAAAAAGAGAAGAAATTTGAATAGGAGATGATTGATGG GACTGCTATTACTCAAAAGTGACACCTATTTGGGACATATTTTGTATCCTAGAAAGACAACTAT TTTGGGACGAAGGAAGTATGAAATAGATATCTTGCTTGACAACACTGATATCCTGTTTTGGTAT GATAGGTTCACTATTAATTCTCAAGCTTAGCTTTCCATGGCTGATATATGTCAACAGTATATCT TAATGTTTTTTAGTTTGTACTACTACAAAAGTTCACGTTTACCATACATGTGAAATCTAAATAT TAGTGGTTTTGCATATGCTATTCAACATTGGTTGCTTGTGTTTTCTTTTCTGCATTTTCTCGTT TTCAAGAAAATTGTATGACGCAACTATACCAACCTTAATTAATTACTTTTACTTACTAATTTTT TCTTCTTCCTTTGCAGCTATTGATGCCAGTCTTCCCTGGTCAGATGCGCTACATCCGCAAAAAT CTATTCCATGCTGTTTATGTGTTTGATCCTGCTTCAGTCTGTGGTGCAGAGGCTAGTCTCTTTC TTACCTTCCAGTTTTATGTTTTTGTCTTTTTAACCTGGAGCCTTTTTCTAACTGGGTGTCCTGT TGCCATTTCTCTTTAAATCTTTACAGACCATTGACATGGTTCTATCTCTATACCAAGATAGTGT CCCTATAAGGTTTGGCATTATATTGTATTCTTCAAGGCTTATTAGTGTTATTGAAGAAAATGAT GGCAATCTTCCAGTAAATAATGGGTCTAAGACTGAGGAGGATATTTCTATTTTGGTAATCATTT TTTTTAATTTACTTTGAATTCTTGAGATCATTGTTTGATGTGTAGAGCATGAAACTGGTATTGC ATTATAATTACTTGAGTTATTTACCTTATATTTTCATTAAATACTACTAATGCTCGAAGGAATC AAGTGTACATTACATTATACAATATTAAAGGGGCGTCCTATATTTAATGTAATACACATTTTAT GTTAGTCTGATGCCTATGTGGTCCTTTTTCTTTTTTCCTGTTGATAAATAAACATTTACATACC GTGTCCTTGCAACCTACATGTTCTGGTAGTTCCATTTTTCGTGACTTACCATTATGTACATATG TGGTGCACACGACCCATGTTTTCTATTGATAGGACGATTCACAGCATAATAAGATTATAATTTT AGGGATTCCTAGTAACAGTATATTGCAATTAGTAGGTCCATGTAATTATTCTGAACTGGAAGGG ATACACAGCAGCAGAAGATTACAGTTAGTATGTCCTATGTACTATTTTAAACTATAAGGGGTAT GAACATAAGAAAGGGAAATCTATGAATATGCGTCATCGTACAATATGATGCAGCACATTTCCTA GTGGTCTTGACTAGTGAGATGGATTATAACCTTAATTGCCTCATAAAAGGAATTGATGCACCAT GTTTCCCTTTTTGCAGATAATAAGGCTATTCCTGTACATCAAGGAAACATACTCAACGCAGTTG GCATACCAGTTCCTAAGCAATGTGAGTGCACATAACATATTTGATTTGCTATTTATAAACTAGA AAATTCAGCTTGAGTGGATATGGTGGCAAAAGAAGGAAACGTGTATCTTTCAATACTTGAATAT ATCTTTTTTCTGTATGCTAGACCAATTTCATGTCTAAAAGAATTTGAGCTTTGGCATATTTTCT CTTCTTTTTGGCATAAAATACAGTGCTTCTGTTAGTTTTCATCATCCTCTCTGCCTTGTGCCTT CCATGAGTGATGACATTTGTGTTAAGTTTTGTGCTAAGCTTATTGTGGTGTAAAAAATCATTGC AAACTGTTCATCATAATTGTCAGAGCTTAAAAACATGTGGAAGAGGTGTCTGCTAGACTTTTAA TTTTGCTGAACAACCCTTTCACCAATTTTTCATCTGAAGTAAAAGTTGAGATTTGTTTTATATA TCCTTTCATGATTAGTTCTCTTTCTTTCTTTTTTGTTTCTTCGGAAAATTGATAATGGTTGATG GAATTACATGTCTGACATGGCTCTAAGAAATTGGAATGTAGTGGCATTTGTCTATTGTTATGTT GCATATTGATCCTTGAATAATATTGCTCAGGTGGGCATGTTACAGTTTCCATCTAAAATATCAC TAGTGAAATCATGATCATGTTCTTTACGTTATATTTGCTATTTAATTGTCTTGCCAATCTGTGC ACACTCTAGATGTTCTTCGTTTCCTATAGTTCTAATCCTTGTGATATTTTCTTCTCCAGATACA TAAATCACAGAACAGTGGTGATGACTATAATGAAGAGTCTGTGGAAGCTCATCATGTTGAAGGG GCATTTGTTGATTCCTTATTGTAAGCTCATTCACTGAATTCAATATTTTGTTGGAGATAATTGT TCAAATATATTTAACATGTTTTCCTTGTTCTACTAATATTTGGTAATGTACAGGTCAAGTGCTA AATCTCACCCTCAAGATGTGCTGCTAAAGTTGCAAAAAGAGAACATGCACAAACAAGAGGCTGA AGAAAGTTCTCGTTTTGTTCACAAACTTGGGTTGTATAAACTCCAGTGTTGCCTATTGATGAAT GGACTTGTGCATGAATCAAGCGAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS

Conservation Information
Conserved circRNAs	NA
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							28691086-28695939(+)
						
					

						Potential amino acid sequence
						
							MSFRDYLLSSTVSDTLEVWELKDLGHQTAQRILHASDPLQSMQEINQNFPSIVSSLSRMKLDDS
IKDEIIANQRMVPPGKSLMALNGALINIEDLDLYLLMDMVHEELSLADQFVKLKIPGSAVHKIL
SAAPPTESNSFRVDFRSSHVHYLNNLEEDALYKRWRSNINELLMPVFPGQMRYIRKNLFHAVYV
FDPASTIDMVLSLYQDSVPIRFGIILYSSRLISVIEENDGNLPVNNGSKTEEDISILIIRLFLY
IKETYSTQLAYQFLSNIHKSQNSGDDYNEESVEAHHVEGAFVDSLLSSAKSHPQDVLLKLQKEN
MHKQEAEESSRFVHKLGLYKLQCCLLMNGLVHESSEERKPALNAEIMSFRDYLLSSTVSDTLEV
WELKDLGHQTAQRILHASDPLQSMQEINQNFPSIVSSLSRMKLDDSIKDEIIANQRMVPPGKSL
MALNGALINIEDLDLYLLMDMVHEELSLADQFVKLKIPGSAVHKILSAAPPTESNSFRVDFRSS
HVHYLNNLEEDALYKRWRSNINELLMPVFPGQMRYIRKNLFHAVYVFDPASTIDMVLSLYQDSV
PIRFGIILYSSRLISVIEENDGNLPVNNGSKTEEDISILIIRLFLYIKETYSTQLAYQFLSNIH
KSQNSGDDYNEESVEAHHVEGAFVDSLLSSAKSHPQDVLLKLQKENMHKQEAEESSRFVHKLGL
YKLQCCLLMNGLVHESSEERKPALNAEIMSFRDYLLSSTVSDTLEVWELKDLGHQTAQRILHAS
DPLQSMQEINQNFPSIVSSLSRMKLDDSIKDEIIANQRMVPPGKSLMALNGALINIEDLDLYLL
MDMVHEELSLADQFVKLKIPGSAVHKILSAAPPTESNSFRVDFRSSHVHYLNNLEEDALYKRWR
SNINELLMPVFPGQMRYIRKNLFHAVYVFDPASTIDMVLSLYQDSVPIRFGIILYSSRLISVIE
ENDGNLPVNNGSKTEEDISILIIRLFLYIKETYSTQLAYQFLSNIHKSQNSGDDYNEESVEAHH
VEGAFVDSLLSSAKSHPQDVLLKLQKENMHKQEAEESSRFVHKLGLYKLQCCLLMNGLVHESSE
ERKPALNAEIMSFRDYLLSSTVSDTLEVWELKDLGHQTAQRILHASDPLQSMQEINQNFPSIVS
SLSRMKLDDSIKDEIIANQRMVPPGKSLMALNGALINIEDLDLYLLMDMVHEELSLADQFVKLK
IPGSAVHKILSAAPPTESNSFRVDFRSSHVHYLNNLEEDALYKRWRSNINELLMPVFPGQMRYI
RKNLFHAVYVFDPASTIDMVLSLYQDSVPIRFGIILYSSRLISVIEENDGNLPVNNGSKTEEDI
SILIIRLFLYIKETYSTQLAYQFLSNIHKSQNSGDDYNEESVEAHHVEGAFVDSLLSSAKSHPQ
DVLLKLQKENMHKQEAEESSRFVHKLGLYKLQCCLLMNGLVHESSE(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	28691086-28695939(+)
Potential amino acid sequence	MSFRDYLLSSTVSDTLEVWELKDLGHQTAQRILHASDPLQSMQEINQNFPSIVSSLSRMKLDDS IKDEIIANQRMVPPGKSLMALNGALINIEDLDLYLLMDMVHEELSLADQFVKLKIPGSAVHKIL SAAPPTESNSFRVDFRSSHVHYLNNLEEDALYKRWRSNINELLMPVFPGQMRYIRKNLFHAVYV FDPASTIDMVLSLYQDSVPIRFGIILYSSRLISVIEENDGNLPVNNGSKTEEDISILIIRLFLY IKETYSTQLAYQFLSNIHKSQNSGDDYNEESVEAHHVEGAFVDSLLSSAKSHPQDVLLKLQKEN MHKQEAEESSRFVHKLGLYKLQCCLLMNGLVHESSEERKPALNAEIMSFRDYLLSSTVSDTLEV WELKDLGHQTAQRILHASDPLQSMQEINQNFPSIVSSLSRMKLDDSIKDEIIANQRMVPPGKSL MALNGALINIEDLDLYLLMDMVHEELSLADQFVKLKIPGSAVHKILSAAPPTESNSFRVDFRSS HVHYLNNLEEDALYKRWRSNINELLMPVFPGQMRYIRKNLFHAVYVFDPASTIDMVLSLYQDSV PIRFGIILYSSRLISVIEENDGNLPVNNGSKTEEDISILIIRLFLYIKETYSTQLAYQFLSNIH KSQNSGDDYNEESVEAHHVEGAFVDSLLSSAKSHPQDVLLKLQKENMHKQEAEESSRFVHKLGL YKLQCCLLMNGLVHESSEERKPALNAEIMSFRDYLLSSTVSDTLEVWELKDLGHQTAQRILHAS DPLQSMQEINQNFPSIVSSLSRMKLDDSIKDEIIANQRMVPPGKSLMALNGALINIEDLDLYLL MDMVHEELSLADQFVKLKIPGSAVHKILSAAPPTESNSFRVDFRSSHVHYLNNLEEDALYKRWR SNINELLMPVFPGQMRYIRKNLFHAVYVFDPASTIDMVLSLYQDSVPIRFGIILYSSRLISVIE ENDGNLPVNNGSKTEEDISILIIRLFLYIKETYSTQLAYQFLSNIHKSQNSGDDYNEESVEAHH VEGAFVDSLLSSAKSHPQDVLLKLQKENMHKQEAEESSRFVHKLGLYKLQCCLLMNGLVHESSE ERKPALNAEIMSFRDYLLSSTVSDTLEVWELKDLGHQTAQRILHASDPLQSMQEINQNFPSIVS SLSRMKLDDSIKDEIIANQRMVPPGKSLMALNGALINIEDLDLYLLMDMVHEELSLADQFVKLK IPGSAVHKILSAAPPTESNSFRVDFRSSHVHYLNNLEEDALYKRWRSNINELLMPVFPGQMRYI RKNLFHAVYVFDPASTIDMVLSLYQDSVPIRFGIILYSSRLISVIEENDGNLPVNNGSKTEEDI SILIIRLFLYIKETYSTQLAYQFLSNIHKSQNSGDDYNEESVEAHHVEGAFVDSLLSSAKSHPQ DVLLKLQKENMHKQEAEESSRFVHKLGLYKLQCCLLMNGLVHESSE(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA008766_circ_g.1

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