Detail information of BGIOSGA017042_circ_g.2


General Information
CircRNA Name BGIOSGA017042_circ_g.2
ID in PlantcircBase osi_circ_014733
Alias Chr04:30899236_30899431(MH63RS2)
Organism Oryza sativa ssp. indica
Position chr4: 29027746-29027941  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method CIRI2
Parent gene BGIOSGA017042
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA017042_circ_g.1
Support reads NA
Tissues root, leaf, panicle
Exon boundary   No-No
Splicing signals   GT-AA
Number of exons covered BGIOSGA017042-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   GGACCGTCAAGGAGATCCTTGGGACCTGCGTCAGCGTTGGGTGCACCGTCGACGGCAAGGACCC
CAAGGATCTGCAGCAGGAGATCTCCGATGGCGAGggtcaagaacatcaagcacagtggtaacat
cagcctcgacgacgtcatcgagatcgccaggatcatgaggaacaggtccatggccaaggagatg
gccg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence GGTCAAGAACATCAAGCACAGTGGTAACATCAGCCTCGACGACGTCATCGAGATCGCCAGGATC
ATGAGGAACAGGTCCATGGCCAAGGAGATGGCCGGGACCGTCAAGGAGATCCTTGGGACCTGCG
TCAGCGTTGGGTGCACCGTCGACGGCAAGGACCCCAAGGATCTGCAGCAGGAGATCTCCGATGG
CGAG
Conservation Information
Conserved circRNAs osa_circ_025050
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Zhou et al., 2021