Plant Circular RNA Database

Detail information of Os07g0662900_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os07g0662900_circ_g.3
					
						ID in PlantcircBase
						osa_circ_035187
					
						Alias
						Os_ciR11171
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr7: 27963026-27965505  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							Os07g0662900						
					
						Parent gene annotation
						
							Similar to 4-alpha-glucanotransferase (EC 2.4.1.25). (Os07t06629
00-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os07g0662900_circ_g.2 Os07g0662900_circ_g.4 						
					
						Support reads
						2
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os07t0662900-01:11

General Information
CircRNA Name	Os07g0662900_circ_g.3
ID in PlantcircBase	osa_circ_035187
Alias	Os_ciR11171
Organism	Oryza sativa
Position	chr7: 27963026-27965505 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	find_circ
Parent gene	Os07g0662900
Parent gene annotation	Similar to 4-alpha-glucanotransferase (EC 2.4.1.25). (Os07t06629 00-01)
Parent gene strand	+
Alternative splicing	Os07g0662900_circ_g.2 Os07g0662900_circ_g.4
Support reads	2
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os07t0662900-01:11

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGGCTGGAGAAAGAA
GACAGCATTCGGCGTGGTTTGTTTGATCTACTACAGgaatcaccatggaggggtgcaggtgttg
ctgtacctatattctcgatcaggtcaaatgaggaccttggtgttggagaattccttgatcttaa
acttcttg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1257
Transcript exons: 27963026-27963222,27963308-27963386,27963533-27963571,27
963781-27963900,27963996-27964097,27964233-27964316,2796
4411-27964653,27964735-27964860,27964944-27965018,279651
13-27965184,27965386-27965505
GAATCACCATGGAGGGGTGCAGGTGTTGCTGTACCTATATTCTCGATCAGGTCAAATGAGGACC
TTGGTGTTGGAGAATTCCTTGATCTTAAACTTCTTGTTGACTGGGCAGTCAACTCAGGCTTTCA
TCTTGTTCAGCTTCTTCCTATCAATGATACTTCAGTTCACGGGATGTGGTGGGATTCATACCCA
TACAGCTCGCTCTCTGTGTTTGCATTGCACCCCTTGTACCTGAGAGTACAAGCACTTTCAGATG
CAATTCCAGGGGATATTAAGGACGAGATTTCACAGGCAAAGAAGCAGTTGGACAAAAAGGATGT
TGACTATGAGGCATCACTGGCCTCAAAACTCTCGATAGCAAGAAAAATATTCAAATTAGAGAAA
GACAAAGTACTAAATTCCAGTTCGTTCAAGCAGTTTTTATCTGAAAACGAGGAGTGGTTGAAAC
CATATGCTGCATTTTGTTTTCTGCGGGACTTCTTTGAGACATCAGATCACAGCCAATGGGGCCG
TTTTTCTCAGTTTTCCAAGGAGAAGCTAGATAAGCTTGTTTCTGAAGGTACCTTGCACCATGAC
GTTATATGTTTCCATTACTACATCCAGTACCATCTATATATGCAATTATCAGAGGCAGCTGCCT
ATGCAAGGAAGAAAAAGGTTATTCTGAAAGGAGATTTACCTATTGGTGTTGATAGGAATAGTGT
GGATACTTGGGTATACCCCACTTTATTTCGCATGAATACAGCTACTGGTGCACCTCCAGATTAT
TTCGACAAAAATGGACAAAATTGGGGTTTTCCTACATATAACTGGGAGGAAATGTCAAAGGATA
ATTATGGGTGGTGGCGAGCTCGTCTGACACAGATGGCAAAATACTTCACTGCATATAGGATAGA
CCATATCTTGGGTTTCTTTAGGATATGGGAGCTTCCAGATCATGCAGCCACAGGTCTAGTTGGG
AAATTTAGGCCTTCAATTGCTCTCAGTCAGGAGGAGCTTCTTAGTGAAGGCCTATGGGATTTCG
ATAGAATGAGCCGCCCTTATATTCTTCAGGAAACACTGGAGGAGAAGTTTGGGTCCTTTTGGAC
AGTAATTGCAGCTAACTTTCTAAATGAGTACAAGAAACAACATTACGAGTTCAAAGAGGACTGC
AATACAGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGGCTGGAGA
AAGAAGACAGCATTCGGCGTGGTTTGTTTGATCTACTACAG
						
					

						Genomic sequence
						
							GAATCACCATGGAGGGGTGCAGGTGTTGCTGTACCTATATTCTCGATCAGGTCAAATGAGGACC
TTGGTGTTGGAGAATTCCTTGATCTTAAACTTCTTGTTGACTGGGCAGTCAACTCAGGCTTTCA
TCTTGTTCAGCTTCTTCCTATCAATGATACTTCAGTTCACGGGATGTGGTGGGATTCATACCCA
TACAGGTATTGGGCTGATGCAGTGTGCTTTTGCTTTGAGTAAGAAGAATAGTATCTGAACAGAA
ATAATGCCCTACATGTTGGTTTACAGCTCGCTCTCTGTGTTTGCATTGCACCCCTTGTACCTGA
GAGTACAAGCACTTTCAGATGCAATTCCAGGGGATATTAAGGTGTACCTTTGTTATACCTTCAT
ATGAACTCATTGTACCCGTTATCTATGTTAACTTTTAATTTCAATATTTCACTGATTTTGGTAG
GTCTTGTATGATTTCAAGTTCATTCCTGATCCAGTACTCAATATTTCTTATTATTACAGGACGA
GATTTCACAGGCAAAGAAGCAGTTGGACAAAAAGGTACAGATATTATCAAATGCATAGCATATC
ACTAATTTACCTTTTGTCACTGGTATGTTGCTGACCTGCTGTTGGATGGATGCAACTCATGTCC
TCTATATAATTTAGCTACGCTTAAATCTAAAATCAGATGGTTATGTAATTAATATAATTCTTCT
GTTGCTTGCAGAAACCTAACATTCTGTTATTTGAAAATCATGTTTAAACAGGATGTTGACTATG
AGGCATCACTGGCCTCAAAACTCTCGATAGCAAGAAAAATATTCAAATTAGAGAAAGACAAAGT
ACTAAATTCCAGTTCGTTCAAGCAGTTTTTATCTGAAAACGAGGTATATTTAGTTATTTGCTAG
CATTTTATTTAGTTGAAGTACTTGATAACTTATTTCAGACTTACTGTGATTGCGTTCCTTCCAT
GTTCCAATAGGAGTGGTTGAAACCATATGCTGCATTTTGTTTTCTGCGGGACTTCTTTGAGACA
TCAGATCACAGCCAATGGGGCCGTTTTTCTCAGTTTTCCAAGGAGAAGGTGCGATCAGTATAAC
ATGCTAAACATTCTTTTAAGAAAATCCTATCATTCGGTTTTATTCTTTCTGAGAGGCGAGACCA
TATATGGGAAAATGTTCAAGTACTAAGTGATGGCTGTTTCTGTAATTTCTTTCAGCTAGATAAG
CTTGTTTCTGAAGGTACCTTGCACCATGACGTTATATGTTTCCATTACTACATCCAGTACCATC
TATATATGCAAGTAAGTATTGGTGGTTGTCCTTGTCACTCTGATCTGCATACAGAGTTTTTCTT
GCATATGTACTCACTGACATTTATTATCTCCTTCATGTTAGTTATCAGAGGCAGCTGCCTATGC
AAGGAAGAAAAAGGTTATTCTGAAAGGAGATTTACCTATTGGTGTTGATAGGAATAGTGTGGAT
ACTTGGGTATACCCCACTTTATTTCGCATGAATACAGCTACTGGTGCACCTCCAGATTATTTCG
ACAAAAATGGACAAAATTGGGGTTTTCCTACATATAACTGGGAGGAAATGTCAAAGGATAATTA
TGGGTGGTGGCGAGCTCGTCTGACACAGGTTATTTAATAGCAAATATTTTTTCCTGTCTGGCTG
GTCATCTTTTATCGTCATTATTTATCGCCAGTTACCTTGTTCCAGATGGCAAAATACTTCACTG
CATATAGGATAGACCATATCTTGGGTTTCTTTAGGATATGGGAGCTTCCAGATCATGCAGCCAC
AGGTCTAGTTGGGAAATTTAGGCCTTCAATTGCTCTCAGTCAGGTTGGTTTCTGCAGCTGTTAA
ACAAACTAAAAGAGACTAGAGAGCCTGAAGTTTATCTGACTTTTTCCTATGTTGATTTTCAGGA
GGAGCTTCTTAGTGAAGGCCTATGGGATTTCGATAGAATGAGCCGCCCTTATATTCTTCAGGAA
ACACTGGAGGTTTGTCTTTCTTGTTCCTAAAACAATGATCTATCTTTTTTTTTTAACAGGAAGG
AAAACAGGGCACCAGCATGACATTTCTATTCTGTTATAGGAGAAGTTTGGGTCCTTTTGGACAG
TAATTGCAGCTAACTTTCTAAATGAGTACAAGAAACAACATTACGAGGTAATGCAATCAGTTAT
ATTCTCTTTTCATGTTTGTTGAACGTATCACCTACTTAAAACCGCATGGCATGAGTAGATTTAG
CTTAGGCTTTAGTACAGAAGTCTCCATTTCAAAATCAGCTACGTGCACTCCTTACTGCATTTTT
CCATTACATTTCGTCCTCTAATTTCCCTTGCAATTTATTGTTTTGCACGTGTATAGTTCAAAGA
GGACTGCAATACAGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGG
CTGGAGAAAGAAGACAGCATTCGGCGTGGTTTGTTTGATCTACTACAG
						
					

			
		

Sequences
Splice junction sequence	AGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGGCTGGAGAAAGAA GACAGCATTCGGCGTGGTTTGTTTGATCTACTACAGgaatcaccatggaggggtgcaggtgttg ctgtacctatattctcgatcaggtcaaatgaggaccttggtgttggagaattccttgatcttaa acttcttg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1257 Transcript exons: 27963026-27963222,27963308-27963386,27963533-27963571,27 963781-27963900,27963996-27964097,27964233-27964316,2796 4411-27964653,27964735-27964860,27964944-27965018,279651 13-27965184,27965386-27965505 GAATCACCATGGAGGGGTGCAGGTGTTGCTGTACCTATATTCTCGATCAGGTCAAATGAGGACC TTGGTGTTGGAGAATTCCTTGATCTTAAACTTCTTGTTGACTGGGCAGTCAACTCAGGCTTTCA TCTTGTTCAGCTTCTTCCTATCAATGATACTTCAGTTCACGGGATGTGGTGGGATTCATACCCA TACAGCTCGCTCTCTGTGTTTGCATTGCACCCCTTGTACCTGAGAGTACAAGCACTTTCAGATG CAATTCCAGGGGATATTAAGGACGAGATTTCACAGGCAAAGAAGCAGTTGGACAAAAAGGATGT TGACTATGAGGCATCACTGGCCTCAAAACTCTCGATAGCAAGAAAAATATTCAAATTAGAGAAA GACAAAGTACTAAATTCCAGTTCGTTCAAGCAGTTTTTATCTGAAAACGAGGAGTGGTTGAAAC CATATGCTGCATTTTGTTTTCTGCGGGACTTCTTTGAGACATCAGATCACAGCCAATGGGGCCG TTTTTCTCAGTTTTCCAAGGAGAAGCTAGATAAGCTTGTTTCTGAAGGTACCTTGCACCATGAC GTTATATGTTTCCATTACTACATCCAGTACCATCTATATATGCAATTATCAGAGGCAGCTGCCT ATGCAAGGAAGAAAAAGGTTATTCTGAAAGGAGATTTACCTATTGGTGTTGATAGGAATAGTGT GGATACTTGGGTATACCCCACTTTATTTCGCATGAATACAGCTACTGGTGCACCTCCAGATTAT TTCGACAAAAATGGACAAAATTGGGGTTTTCCTACATATAACTGGGAGGAAATGTCAAAGGATA ATTATGGGTGGTGGCGAGCTCGTCTGACACAGATGGCAAAATACTTCACTGCATATAGGATAGA CCATATCTTGGGTTTCTTTAGGATATGGGAGCTTCCAGATCATGCAGCCACAGGTCTAGTTGGG AAATTTAGGCCTTCAATTGCTCTCAGTCAGGAGGAGCTTCTTAGTGAAGGCCTATGGGATTTCG ATAGAATGAGCCGCCCTTATATTCTTCAGGAAACACTGGAGGAGAAGTTTGGGTCCTTTTGGAC AGTAATTGCAGCTAACTTTCTAAATGAGTACAAGAAACAACATTACGAGTTCAAAGAGGACTGC AATACAGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGGCTGGAGA AAGAAGACAGCATTCGGCGTGGTTTGTTTGATCTACTACAG
Genomic sequence	GAATCACCATGGAGGGGTGCAGGTGTTGCTGTACCTATATTCTCGATCAGGTCAAATGAGGACC TTGGTGTTGGAGAATTCCTTGATCTTAAACTTCTTGTTGACTGGGCAGTCAACTCAGGCTTTCA TCTTGTTCAGCTTCTTCCTATCAATGATACTTCAGTTCACGGGATGTGGTGGGATTCATACCCA TACAGGTATTGGGCTGATGCAGTGTGCTTTTGCTTTGAGTAAGAAGAATAGTATCTGAACAGAA ATAATGCCCTACATGTTGGTTTACAGCTCGCTCTCTGTGTTTGCATTGCACCCCTTGTACCTGA GAGTACAAGCACTTTCAGATGCAATTCCAGGGGATATTAAGGTGTACCTTTGTTATACCTTCAT ATGAACTCATTGTACCCGTTATCTATGTTAACTTTTAATTTCAATATTTCACTGATTTTGGTAG GTCTTGTATGATTTCAAGTTCATTCCTGATCCAGTACTCAATATTTCTTATTATTACAGGACGA GATTTCACAGGCAAAGAAGCAGTTGGACAAAAAGGTACAGATATTATCAAATGCATAGCATATC ACTAATTTACCTTTTGTCACTGGTATGTTGCTGACCTGCTGTTGGATGGATGCAACTCATGTCC TCTATATAATTTAGCTACGCTTAAATCTAAAATCAGATGGTTATGTAATTAATATAATTCTTCT GTTGCTTGCAGAAACCTAACATTCTGTTATTTGAAAATCATGTTTAAACAGGATGTTGACTATG AGGCATCACTGGCCTCAAAACTCTCGATAGCAAGAAAAATATTCAAATTAGAGAAAGACAAAGT ACTAAATTCCAGTTCGTTCAAGCAGTTTTTATCTGAAAACGAGGTATATTTAGTTATTTGCTAG CATTTTATTTAGTTGAAGTACTTGATAACTTATTTCAGACTTACTGTGATTGCGTTCCTTCCAT GTTCCAATAGGAGTGGTTGAAACCATATGCTGCATTTTGTTTTCTGCGGGACTTCTTTGAGACA TCAGATCACAGCCAATGGGGCCGTTTTTCTCAGTTTTCCAAGGAGAAGGTGCGATCAGTATAAC ATGCTAAACATTCTTTTAAGAAAATCCTATCATTCGGTTTTATTCTTTCTGAGAGGCGAGACCA TATATGGGAAAATGTTCAAGTACTAAGTGATGGCTGTTTCTGTAATTTCTTTCAGCTAGATAAG CTTGTTTCTGAAGGTACCTTGCACCATGACGTTATATGTTTCCATTACTACATCCAGTACCATC TATATATGCAAGTAAGTATTGGTGGTTGTCCTTGTCACTCTGATCTGCATACAGAGTTTTTCTT GCATATGTACTCACTGACATTTATTATCTCCTTCATGTTAGTTATCAGAGGCAGCTGCCTATGC AAGGAAGAAAAAGGTTATTCTGAAAGGAGATTTACCTATTGGTGTTGATAGGAATAGTGTGGAT ACTTGGGTATACCCCACTTTATTTCGCATGAATACAGCTACTGGTGCACCTCCAGATTATTTCG ACAAAAATGGACAAAATTGGGGTTTTCCTACATATAACTGGGAGGAAATGTCAAAGGATAATTA TGGGTGGTGGCGAGCTCGTCTGACACAGGTTATTTAATAGCAAATATTTTTTCCTGTCTGGCTG GTCATCTTTTATCGTCATTATTTATCGCCAGTTACCTTGTTCCAGATGGCAAAATACTTCACTG CATATAGGATAGACCATATCTTGGGTTTCTTTAGGATATGGGAGCTTCCAGATCATGCAGCCAC AGGTCTAGTTGGGAAATTTAGGCCTTCAATTGCTCTCAGTCAGGTTGGTTTCTGCAGCTGTTAA ACAAACTAAAAGAGACTAGAGAGCCTGAAGTTTATCTGACTTTTTCCTATGTTGATTTTCAGGA GGAGCTTCTTAGTGAAGGCCTATGGGATTTCGATAGAATGAGCCGCCCTTATATTCTTCAGGAA ACACTGGAGGTTTGTCTTTCTTGTTCCTAAAACAATGATCTATCTTTTTTTTTTAACAGGAAGG AAAACAGGGCACCAGCATGACATTTCTATTCTGTTATAGGAGAAGTTTGGGTCCTTTTGGACAG TAATTGCAGCTAACTTTCTAAATGAGTACAAGAAACAACATTACGAGGTAATGCAATCAGTTAT ATTCTCTTTTCATGTTTGTTGAACGTATCACCTACTTAAAACCGCATGGCATGAGTAGATTTAG CTTAGGCTTTAGTACAGAAGTCTCCATTTCAAAATCAGCTACGTGCACTCCTTACTGCATTTTT CCATTACATTTCGTCCTCTAATTTCCCTTGCAATTTATTGTTTTGCACGTGTATAGTTCAAAGA GGACTGCAATACAGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGG CTGGAGAAAGAAGACAGCATTCGGCGTGGTTTGTTTGATCTACTACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.263273199

Conservation Information
Conserved circRNAs	NA
PMCS	0.263273199

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							27963198-27965502(+)
27963037-27965431(-)
						
					

						Potential amino acid sequence
						
							MWWDSYPYSSLSVFALHPLYLRVQALSDAIPGDIKDEISQAKKQLDKKDVDYEASLASKLSIAR
KIFKLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVS
EGTLHHDVICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTA
TGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDH
AATGLVGKFRPSIALSQEELLSEGLWDFDRMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQH
YEFKEDCNTEKKIIAKLKNSSEKSLWLEKEDSIRRGLFDLLQESPWRGAGVAVPIFSIRSNEDL
GVGEFLDLKLLVDWAVNSGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSDA
IPGDIKDEISQAKKQLDKKDVDYEASLASKLSIARKIFKLEKDKVLNSSSFKQFLSENEEWLKP
YAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVSEGTLHHDVICFHYYIQYHLYMQLSEAAAY
ARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDN
YGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIALSQEELLSEGLWDFD
RMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQHYEFKEDCNTEKKIIAKLKNSSEKSLWLEK
EDSIRRGLFDLLQESPWRGAGVAVPIFSIRSNEDLGVGEFLDLKLLVDWAVNSGFHLVQLLPIN
DTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPGDIKDEISQAKKQLDKKDVDYEASLAS
KLSIARKIFKLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEK
LDKLVSEGTLHHDVICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTL
FRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRI
WELPDHAATGLVGKFRPSIALSQEELLSEGLWDFDRMSRPYILQETLEEKFGSFWTVIAANFLN
EYKKQHYEFKEDCNTEKKIIAKLKNSSEKSLWLEKEDSIRRGLFDLLQESPWRGAGVAVPIFSI
RSNEDLGVGEFLDLKLLVDWAVNSGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRV
QALSDAIPGDIKDEISQAKKQLDKKDVDYEASLASKLSIARKIFKLEKDKVLNSSSFKQFLSEN
EEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVSEGTLHHDVICFHYYIQYHLYMQL
SEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWE
EMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIALSQEELLSE
GLWDFDRMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQHYEFKEDCNTEKKIIAKLKNSSEK
SLWLEKEDSIRRGLFDLLQ(+)
MVIPVVDQTNHAECCLLSPAIMIFQNCS*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	27963198-27965502(+) 27963037-27965431(-)
Potential amino acid sequence	MWWDSYPYSSLSVFALHPLYLRVQALSDAIPGDIKDEISQAKKQLDKKDVDYEASLASKLSIAR KIFKLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVS EGTLHHDVICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTA TGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDH AATGLVGKFRPSIALSQEELLSEGLWDFDRMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQH YEFKEDCNTEKKIIAKLKNSSEKSLWLEKEDSIRRGLFDLLQESPWRGAGVAVPIFSIRSNEDL GVGEFLDLKLLVDWAVNSGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSDA IPGDIKDEISQAKKQLDKKDVDYEASLASKLSIARKIFKLEKDKVLNSSSFKQFLSENEEWLKP YAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVSEGTLHHDVICFHYYIQYHLYMQLSEAAAY ARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDN YGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIALSQEELLSEGLWDFD RMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQHYEFKEDCNTEKKIIAKLKNSSEKSLWLEK EDSIRRGLFDLLQESPWRGAGVAVPIFSIRSNEDLGVGEFLDLKLLVDWAVNSGFHLVQLLPIN DTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPGDIKDEISQAKKQLDKKDVDYEASLAS KLSIARKIFKLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEK LDKLVSEGTLHHDVICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTL FRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRI WELPDHAATGLVGKFRPSIALSQEELLSEGLWDFDRMSRPYILQETLEEKFGSFWTVIAANFLN EYKKQHYEFKEDCNTEKKIIAKLKNSSEKSLWLEKEDSIRRGLFDLLQESPWRGAGVAVPIFSI RSNEDLGVGEFLDLKLLVDWAVNSGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRV QALSDAIPGDIKDEISQAKKQLDKKDVDYEASLASKLSIARKIFKLEKDKVLNSSSFKQFLSEN EEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVSEGTLHHDVICFHYYIQYHLYMQL SEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWE EMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIALSQEELLSE GLWDFDRMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQHYEFKEDCNTEKKIIAKLKNSSEK SLWLEKEDSIRRGLFDLLQ(+) MVIPVVDQTNHAECCLLSPAIMIFQNCS*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015

circRNA

Detail information of Os07g0662900_circ_g.3

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