Plant Circular RNA Database

Detail information of Os10g0127700_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os10g0127700_circ_g.1
					
						ID in PlantcircBase
						osa_circ_006149
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 1733973-1736765  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os10g0127700						
					
						Parent gene annotation
						
							Protein of unknown function DUF639 family protein. (Os10t0127700
-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os10g0126500_circ_ag.1 Os10g0126500_circ_igg.1 Os10g0126600_circ_ag.1 Os10g0127700_circ_g.2 Os10g0127700_circ_g.3 						
					
						Support reads
						4
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os10t0127700-01:4

General Information
CircRNA Name	Os10g0127700_circ_g.1
ID in PlantcircBase	osa_circ_006149
Alias	NA
Organism	Oryza sativa
Position	chr10: 1733973-1736765 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os10g0127700
Parent gene annotation	Protein of unknown function DUF639 family protein. (Os10t0127700 -01)
Parent gene strand	-
Alternative splicing	Os10g0126500_circ_ag.1 Os10g0126500_circ_igg.1 Os10g0126600_circ_ag.1 Os10g0127700_circ_g.2 Os10g0127700_circ_g.3
Support reads	4
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os10t0127700-01:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CGTCAATGTTCCATCTACTTCTACAATCCTTTCTCCTCTCTGAGACCGCTGGGCAGATAAAAGC
GAGGACTCAGATTGTCCTTTCATTTTCTTAATTGCTctgataatgatataagacgatgaaaagc
aaaataccatggacttaattggctcatcccaagatgccagcaacaccaaaaacctccatagctc
acttacgg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1002
Transcript exons: 1733973-1734085,1735096-1735663,1736323-1736500,1736623-
1736765
CTGATAATGATATAAGACGATGAAAAGCAAAATACCATGGACTTAATTGGCTCATCCCAAGATG
CCAGCAACACCAAAAACCTCCATAGCTCACTTACGGGAGATAGCAATTCCTTCATCACTGCCAA
GTTTGTATCCAGGCCATCAACTTTGACTCCATCAACTGTGGCTTGGGCCAATTCAACCTTCTTA
TAGTTGTTCATTGACTCATTAACTACCTTCTGCAAGGCACTCATTTCCCCAACAACTATCTCGC
CAACAAAGAGTCTCTCACCTTTATTAATTGGTGATACCACTCCAAGATTCGACAGAACAGTAAA
GGGGGACATTGAATGCCTTCCACTGCTAGTGCCAGGTTGGTTAACTTGAGTTGATCTTCTCGAT
GATATAGAACCAGCTAGTGTTTCAAGTATTACATCACCTCCGGGAAGTTTGTCACATAGATTAA
ACATCAAAAGAGACTCGAATCGATTAGAAACTGGAATGGCTAACTCTTCAATAGCTTGTAGCCG
CATAATGCTTAGTACAGCCTTCAAAATTGTTTCCTCTTTGTCAACTCCACTTATGTCAAACTTC
CTAACAAATCTGTGGACATAGAGAATTTCTGATATGATGGCCAGCCAATAGTCACGACGAAAGT
GGCCAGCCAACTCTGGAAATTCTATGATCACTGGTTCTGTTAAAGTTGTTGATTTATACATAAC
AGCTTTGTCAAATAGCCGTGAGCCCCATGGACCAGTCAGCTCAGGTTTAACAGACTGCTTTAGA
TCTTCGGCAAGCTCATAAGCTTTAGGCTTATCATAGGTCACAACCCGAAGTGCTTCGAAGTAAA
GAGCATGATCAGTAAGTGTTAACCTTCCTGGCCATGTCGAAATCCCAACATGTTCAAGTACTGG
TTGAGTCGTCAATGTTCCATCTACTTCTACAATCCTTTCTCCTCTCTGAGACCGCTGGGCAGAT
AAAAGCGAGGACTCAGATTGTCCTTTCATTTTCTTAATTGCT
						
					

						Genomic sequence
						
							CTGATAATGATATAAGACGATGAAAAGCAAAATACCATGGACTTAATTGGCTCATCCCAAGATG
CCAGCAACACCAAAAACCTCCATAGCTCACTTACGGGAGATAGCAATTCCTAAATACAAGTGAG
GATATAAAAAAAAAGGAAACATGAATCTGTATAGTTTTTTTTGCGGGGATGAATCTGTATAGTT
GCTAGACATGTTTCAAGCAACAATAGTATAAAATATTGTGAACAAAAACCTTCTGGCTAAAAAC
AATATACAACTTCTGATCATAAATATTTCATGTTTAAAACAAGATTTGGTCAAACTTTTGAAAT
TTTGACCATCAATTTTATAATAGAATAAGTTTATAAAATCATAAAGAAAATATGATAGTGCTTT
TCAAGGAAAATCTATGCTTACCATTTTTTTCCTTTTTAAACTAAGCATTGAGAAATAATTGATG
ATCAAAGTTTGAAAAGTTGGACCAAATGTTGACCTAAACATCAAATATTTATGATCAGAGGGAG
TACATACCCAACGGGATTTGCATTGAACATGTTTATACCTTCAAATTTCCATAAGCGAATAAAT
TCTCTTCATCAAAATTCAAATTACTACATTCACAACTTTCAAAACAAGTGGTAATATGGCAAGT
TCTAATTCATATACAATCTCTAAAATAGAGGTAATAATTTTGGAATTTTATGTATCATGCAGAA
ATATGTAAAAGCTGGAAAATATAGGTATGATCAGGCAAATTTCTCCAACAAAATACTTCAGCAA
AAATATTACATTGGAATAAGGATCTCAGTGAAGTCTAAAAACAACATATGGTGAATGGTCACAA
ACAAAGAATTGCTGATTAATTTCTATTTCCATGAATATATATACTTCAACAAAAATTACTTTTT
ATTTTTGTGATGCACAAGCTCTAAATAGGTTAGTTTTGTTCTGAATAATTTAACAGATCAAAAT
GGTGCTGAAATCAATTTGGATAAACCACAATTTATTCTGATTAATTAGGCCCCGTTCACATATC
AGGAAGCCTGCTCACGAAAAATGAGGGAGTAGCTAAACCCAAACATTGAATTGAACAGATCCTT
AACAGTTGAAAAGGCTAATTCTGTTGTGAGTATACCTTCATCACTGCCAAGTTTGTATCCAGGC
CATCAACTTTGACTCCATCAACTGTGGCTTGGGCCAATTCAACCTTCTTATAGTTGTTCATTGA
CTCATTAACTACCTTCTGCAAGGCACTCATTTCCCCAACAACTATCTCGCCAACAAAGAGTCTC
TCACCTTTATTAATTGGTGATACCACTCCAAGATTCGACAGAACAGTAAAGGGGGACATTGAAT
GCCTTCCACTGCTAGTGCCAGGTTGGTTAACTTGAGTTGATCTTCTCGATGATATAGAACCAGC
TAGTGTTTCAAGTATTACATCACCTCCGGGAAGTTTGTCACATAGATTAAACATCAAAAGAGAC
TCGAATCGATTAGAAACTGGAATGGCTAACTCTTCAATAGCTTGTAGCCGCATAATGCTTAGTA
CAGCCTTCAAAATTGTTTCCTCTTTGTCAACTCCACTTATGTCAAACTTCCTAACAAATCTGTG
GACATAGAGAATTTCTGATATGATGGCCAGCCAATAGTCACGACGAAAGTGGCCAGCCAACTCT
GGAAATTCTATGATCACTGGTTCTGTTCTGCATTTGCATTAACAATAAAGAAAAACATGTAACT
AAAGGTGATAAGAGCAAATCTATGTGCTAGTTATAAGGATATCAGGTGAGGGATACATGTTGCT
ACTATCTCCTAATAAAAAGGAATGGATAGCAACGACCTGTAAATTAAAACTAATTAGCAAAATA
CCACTATAGGAATCAGCTATTACGTTTACTAGCCAAGAACCCATGCGTTGCAACGGAAAACGAA
TTCAGTTTCTAGCTTATCAAGTCAATTAAGCACATATTTAGTCAAATTAACACTTTTATGATTT
TCCTTATTAAATAAGTAGATAAACCATCAGTGAAACAGGAGAGTACTCGTTGGAGGTAGGTGTA
ATACTATAGATTGTGGGGCCTAAGTATCAGTGGCAGGGGTGGTGTGGCAGAACAGACACCACCA
CTACTGACATTTGAAGTAGTATAGATTGAATAAGTAGGTGATTTCAAAGTTTAAGATAAACCAA
CAGTGAAACGGGAGAGGACTCGTTGGAGGTTTGTGTAATACTATAGATTATTGGTCCTAAATAT
CAGTGGTAGGGGTGGTGTGGCAGAACGGACACCACCACTACTAACATTTTAAGTAGCATAGATG
TAGTACTCTATTGCTTATTTGCTTTGCTAAGTGTGAAAAAACTTACAAAGTTGTTGATTTATAC
ATAACAGCTTTGTCAAATAGCCGTGAGCCCCATGGACCAGTCAGCTCAGGTTTAACAGACTGCT
TTAGATCTTCGGCAAGCTCATAAGCTTTAGGCTTATCATAGGTCACAACCCGAAGTGCTTCGAA
GTAAAGAGCATGATCAGTAAGTGTTAACCTTCCTGTGCCAGGAAAGGAAAAGTTGAAACCCAGT
GATATAAAACCGTAACAAGGCAAGTTAAAAGAACATGCCAGCATGTAAACAAGAAGAAATCATT
TCTCCTCACTGAGAAATCAGACATACCTGGCCATGTCGAAATCCCAACATGTTCAAGTACTGGT
TGAGTCGTCAATGTTCCATCTACTTCTACAATCCTTTCTCCTCTCTGAGACCGCTGGGCAGATA
AAAGCGAGGACTCAGATTGTCCTTTCATTTTCTTAATTGCT
						
					

			
		

Sequences
Splice junction sequence	CGTCAATGTTCCATCTACTTCTACAATCCTTTCTCCTCTCTGAGACCGCTGGGCAGATAAAAGC GAGGACTCAGATTGTCCTTTCATTTTCTTAATTGCTctgataatgatataagacgatgaaaagc aaaataccatggacttaattggctcatcccaagatgccagcaacaccaaaaacctccatagctc acttacgg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1002 Transcript exons: 1733973-1734085,1735096-1735663,1736323-1736500,1736623- 1736765 CTGATAATGATATAAGACGATGAAAAGCAAAATACCATGGACTTAATTGGCTCATCCCAAGATG CCAGCAACACCAAAAACCTCCATAGCTCACTTACGGGAGATAGCAATTCCTTCATCACTGCCAA GTTTGTATCCAGGCCATCAACTTTGACTCCATCAACTGTGGCTTGGGCCAATTCAACCTTCTTA TAGTTGTTCATTGACTCATTAACTACCTTCTGCAAGGCACTCATTTCCCCAACAACTATCTCGC CAACAAAGAGTCTCTCACCTTTATTAATTGGTGATACCACTCCAAGATTCGACAGAACAGTAAA GGGGGACATTGAATGCCTTCCACTGCTAGTGCCAGGTTGGTTAACTTGAGTTGATCTTCTCGAT GATATAGAACCAGCTAGTGTTTCAAGTATTACATCACCTCCGGGAAGTTTGTCACATAGATTAA ACATCAAAAGAGACTCGAATCGATTAGAAACTGGAATGGCTAACTCTTCAATAGCTTGTAGCCG CATAATGCTTAGTACAGCCTTCAAAATTGTTTCCTCTTTGTCAACTCCACTTATGTCAAACTTC CTAACAAATCTGTGGACATAGAGAATTTCTGATATGATGGCCAGCCAATAGTCACGACGAAAGT GGCCAGCCAACTCTGGAAATTCTATGATCACTGGTTCTGTTAAAGTTGTTGATTTATACATAAC AGCTTTGTCAAATAGCCGTGAGCCCCATGGACCAGTCAGCTCAGGTTTAACAGACTGCTTTAGA TCTTCGGCAAGCTCATAAGCTTTAGGCTTATCATAGGTCACAACCCGAAGTGCTTCGAAGTAAA GAGCATGATCAGTAAGTGTTAACCTTCCTGGCCATGTCGAAATCCCAACATGTTCAAGTACTGG TTGAGTCGTCAATGTTCCATCTACTTCTACAATCCTTTCTCCTCTCTGAGACCGCTGGGCAGAT AAAAGCGAGGACTCAGATTGTCCTTTCATTTTCTTAATTGCT
Genomic sequence	CTGATAATGATATAAGACGATGAAAAGCAAAATACCATGGACTTAATTGGCTCATCCCAAGATG CCAGCAACACCAAAAACCTCCATAGCTCACTTACGGGAGATAGCAATTCCTAAATACAAGTGAG GATATAAAAAAAAAGGAAACATGAATCTGTATAGTTTTTTTTGCGGGGATGAATCTGTATAGTT GCTAGACATGTTTCAAGCAACAATAGTATAAAATATTGTGAACAAAAACCTTCTGGCTAAAAAC AATATACAACTTCTGATCATAAATATTTCATGTTTAAAACAAGATTTGGTCAAACTTTTGAAAT TTTGACCATCAATTTTATAATAGAATAAGTTTATAAAATCATAAAGAAAATATGATAGTGCTTT TCAAGGAAAATCTATGCTTACCATTTTTTTCCTTTTTAAACTAAGCATTGAGAAATAATTGATG ATCAAAGTTTGAAAAGTTGGACCAAATGTTGACCTAAACATCAAATATTTATGATCAGAGGGAG TACATACCCAACGGGATTTGCATTGAACATGTTTATACCTTCAAATTTCCATAAGCGAATAAAT TCTCTTCATCAAAATTCAAATTACTACATTCACAACTTTCAAAACAAGTGGTAATATGGCAAGT TCTAATTCATATACAATCTCTAAAATAGAGGTAATAATTTTGGAATTTTATGTATCATGCAGAA ATATGTAAAAGCTGGAAAATATAGGTATGATCAGGCAAATTTCTCCAACAAAATACTTCAGCAA AAATATTACATTGGAATAAGGATCTCAGTGAAGTCTAAAAACAACATATGGTGAATGGTCACAA ACAAAGAATTGCTGATTAATTTCTATTTCCATGAATATATATACTTCAACAAAAATTACTTTTT ATTTTTGTGATGCACAAGCTCTAAATAGGTTAGTTTTGTTCTGAATAATTTAACAGATCAAAAT GGTGCTGAAATCAATTTGGATAAACCACAATTTATTCTGATTAATTAGGCCCCGTTCACATATC AGGAAGCCTGCTCACGAAAAATGAGGGAGTAGCTAAACCCAAACATTGAATTGAACAGATCCTT AACAGTTGAAAAGGCTAATTCTGTTGTGAGTATACCTTCATCACTGCCAAGTTTGTATCCAGGC CATCAACTTTGACTCCATCAACTGTGGCTTGGGCCAATTCAACCTTCTTATAGTTGTTCATTGA CTCATTAACTACCTTCTGCAAGGCACTCATTTCCCCAACAACTATCTCGCCAACAAAGAGTCTC TCACCTTTATTAATTGGTGATACCACTCCAAGATTCGACAGAACAGTAAAGGGGGACATTGAAT GCCTTCCACTGCTAGTGCCAGGTTGGTTAACTTGAGTTGATCTTCTCGATGATATAGAACCAGC TAGTGTTTCAAGTATTACATCACCTCCGGGAAGTTTGTCACATAGATTAAACATCAAAAGAGAC TCGAATCGATTAGAAACTGGAATGGCTAACTCTTCAATAGCTTGTAGCCGCATAATGCTTAGTA CAGCCTTCAAAATTGTTTCCTCTTTGTCAACTCCACTTATGTCAAACTTCCTAACAAATCTGTG GACATAGAGAATTTCTGATATGATGGCCAGCCAATAGTCACGACGAAAGTGGCCAGCCAACTCT GGAAATTCTATGATCACTGGTTCTGTTCTGCATTTGCATTAACAATAAAGAAAAACATGTAACT AAAGGTGATAAGAGCAAATCTATGTGCTAGTTATAAGGATATCAGGTGAGGGATACATGTTGCT ACTATCTCCTAATAAAAAGGAATGGATAGCAACGACCTGTAAATTAAAACTAATTAGCAAAATA CCACTATAGGAATCAGCTATTACGTTTACTAGCCAAGAACCCATGCGTTGCAACGGAAAACGAA TTCAGTTTCTAGCTTATCAAGTCAATTAAGCACATATTTAGTCAAATTAACACTTTTATGATTT TCCTTATTAAATAAGTAGATAAACCATCAGTGAAACAGGAGAGTACTCGTTGGAGGTAGGTGTA ATACTATAGATTGTGGGGCCTAAGTATCAGTGGCAGGGGTGGTGTGGCAGAACAGACACCACCA CTACTGACATTTGAAGTAGTATAGATTGAATAAGTAGGTGATTTCAAAGTTTAAGATAAACCAA CAGTGAAACGGGAGAGGACTCGTTGGAGGTTTGTGTAATACTATAGATTATTGGTCCTAAATAT CAGTGGTAGGGGTGGTGTGGCAGAACGGACACCACCACTACTAACATTTTAAGTAGCATAGATG TAGTACTCTATTGCTTATTTGCTTTGCTAAGTGTGAAAAAACTTACAAAGTTGTTGATTTATAC ATAACAGCTTTGTCAAATAGCCGTGAGCCCCATGGACCAGTCAGCTCAGGTTTAACAGACTGCT TTAGATCTTCGGCAAGCTCATAAGCTTTAGGCTTATCATAGGTCACAACCCGAAGTGCTTCGAA GTAAAGAGCATGATCAGTAAGTGTTAACCTTCCTGTGCCAGGAAAGGAAAAGTTGAAACCCAGT GATATAAAACCGTAACAAGGCAAGTTAAAAGAACATGCCAGCATGTAAACAAGAAGAAATCATT TCTCCTCACTGAGAAATCAGACATACCTGGCCATGTCGAAATCCCAACATGTTCAAGTACTGGT TGAGTCGTCAATGTTCCATCTACTTCTACAATCCTTTCTCCTCTCTGAGACCGCTGGGCAGATA AAAGCGAGGACTCAGATTGTCCTTTCATTTTCTTAATTGCT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.492736421

Conservation Information
Conserved circRNAs	NA
PMCS	0.492736421

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							1736754-1733975(-)
1734029-1736751(-)
						
					

						Potential amino acid sequence
						
							MKGQSESSLLSAQRSQRGERIVEVDGTLTTQPVLEHVGISTWPGRLTLTDHALYFEALRVVTYD
KPKAYELAEDLKQSVKPELTGPWGSRLFDKAVMYKSTTLTEPVIIEFPELAGHFRRDYWLAIIS
EILYVHRFVRKFDISGVDKEETILKAVLSIMRLQAIEELAIPVSNRFESLLMFNLCDKLPGGDV
ILETLAGSISSRRSTQVNQPGTSSGRHSMSPFTVLSNLGVVSPINKGERLFVGEIVVGEMSALQ
KVVNESMNNYKKVELAQATVDGVKVDGLDTNLAVMKELLSPVSELWRFLVLLASWDEPIKSMVF
CFSSSYIIIRAIKKMKGQSESSLLSAQRSQRGERIVEVDGTLTTQPVLEHVGISTWPGRLTLTD
HALYFEALRVVTYDKPKAYELAEDLKQSVKPELTGPWGSRLFDKAVMYKSTTLTEPVIIEFPEL
AGHFRRDYWLAIISEILYVHRFVRKFDISGVDKEETILKAVLSIMRLQAIEELAIPVSNRFESL
LMFNLCDKLPGGDVILETLAGSISSRRSTQVNQPGTSSGRHSMSPFTVLSNLGVVSPINKGERL
FVGEIVVGEMSALQKVVNESMNNYKKVELAQATVDGVKVDGLDTNLAVMKELLSPVSELWRFLV
LLASWDEPIKSMVFCFSSSYIIIRAIKKMKGQSESSLLSAQRSQRGERIVEVDGTLTTQPVLEH
VGISTWPGRLTLTDHALYFEALRVVTYDKPKAYELAEDLKQSVKPELTGPWGSRLFDKAVMYKS
TTLTEPVIIEFPELAGHFRRDYWLAIISEILYVHRFVRKFDISGVDKEETILKAVLSIMRLQAI
EELAIPVSNRFESLLMFNLCDKLPGGDVILETLAGSISSRRSTQVNQPGTSSGRHSMSPFTVLS
NLGVVSPINKGERLFVGEIVVGEMSALQKVVNESMNNYKKVELAQATVDGVKVDGLDTNLAVMK
ELLSPVSELWRFLVLLASWDEPIKSMVFCFSSSYIIIRAIKKMKGQSESSLLSAQRSQRGERIV
EVDGTLTTQPVLEHVGISTWPGRLTLTDHALYFEALRVVTYDKPKAYELAEDLKQSVKPELTGP
WGSRLFDKAVMYKSTTLTEPVIIEFPELAGHFRRDYWLAIISEILYVHRFVRKFDISGVDKEET
ILKAVLSIMRLQAIEELAIPVSNRFESLLMFNLCDKLPGGDVILETLAGSISSRRSTQVNQPGT
SSGRHSMSPFTVLSNLGVVSPINKGERLFVGEIVVGEMSALQKVVNESMNNYKKVELAQATVDG
VKVDGLDTNLAVMKELLSPVSELWRFLVLLASWDEPIKSMVFCFSSSYIII(-)
MSQLSPWYFAFHRLISLSEQLRK*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	1736754-1733975(-) 1734029-1736751(-)
Potential amino acid sequence	MKGQSESSLLSAQRSQRGERIVEVDGTLTTQPVLEHVGISTWPGRLTLTDHALYFEALRVVTYD KPKAYELAEDLKQSVKPELTGPWGSRLFDKAVMYKSTTLTEPVIIEFPELAGHFRRDYWLAIIS EILYVHRFVRKFDISGVDKEETILKAVLSIMRLQAIEELAIPVSNRFESLLMFNLCDKLPGGDV ILETLAGSISSRRSTQVNQPGTSSGRHSMSPFTVLSNLGVVSPINKGERLFVGEIVVGEMSALQ KVVNESMNNYKKVELAQATVDGVKVDGLDTNLAVMKELLSPVSELWRFLVLLASWDEPIKSMVF CFSSSYIIIRAIKKMKGQSESSLLSAQRSQRGERIVEVDGTLTTQPVLEHVGISTWPGRLTLTD HALYFEALRVVTYDKPKAYELAEDLKQSVKPELTGPWGSRLFDKAVMYKSTTLTEPVIIEFPEL AGHFRRDYWLAIISEILYVHRFVRKFDISGVDKEETILKAVLSIMRLQAIEELAIPVSNRFESL LMFNLCDKLPGGDVILETLAGSISSRRSTQVNQPGTSSGRHSMSPFTVLSNLGVVSPINKGERL FVGEIVVGEMSALQKVVNESMNNYKKVELAQATVDGVKVDGLDTNLAVMKELLSPVSELWRFLV LLASWDEPIKSMVFCFSSSYIIIRAIKKMKGQSESSLLSAQRSQRGERIVEVDGTLTTQPVLEH VGISTWPGRLTLTDHALYFEALRVVTYDKPKAYELAEDLKQSVKPELTGPWGSRLFDKAVMYKS TTLTEPVIIEFPELAGHFRRDYWLAIISEILYVHRFVRKFDISGVDKEETILKAVLSIMRLQAI EELAIPVSNRFESLLMFNLCDKLPGGDVILETLAGSISSRRSTQVNQPGTSSGRHSMSPFTVLS NLGVVSPINKGERLFVGEIVVGEMSALQKVVNESMNNYKKVELAQATVDGVKVDGLDTNLAVMK ELLSPVSELWRFLVLLASWDEPIKSMVFCFSSSYIIIRAIKKMKGQSESSLLSAQRSQRGERIV EVDGTLTTQPVLEHVGISTWPGRLTLTDHALYFEALRVVTYDKPKAYELAEDLKQSVKPELTGP WGSRLFDKAVMYKSTTLTEPVIIEFPELAGHFRRDYWLAIISEILYVHRFVRKFDISGVDKEET ILKAVLSIMRLQAIEELAIPVSNRFESLLMFNLCDKLPGGDVILETLAGSISSRRSTQVNQPGT SSGRHSMSPFTVLSNLGVVSPINKGERLFVGEIVVGEMSALQKVVNESMNNYKKVELAQATVDG VKVDGLDTNLAVMKELLSPVSELWRFLVLLASWDEPIKSMVFCFSSSYIII(-) MSQLSPWYFAFHRLISLSEQLRK*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os10g0127700_circ_g.1

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