Plant Circular RNA Database

Detail information of AT1G19860_circ_g.1

			
						 General Information
					
						CircRNA Name
						AT1G19860_circ_g.1
					
						ID in PlantcircBase
						ath_circ_003459
					
						Alias
						Ath_circ_FC0438, AT1G19860_C1
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr1: 6891713-6893236  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI, MapSplice, circRNA_finder, find_circ, CIRI2
					
						Parent gene
						
							AT1G19860						
					
						Parent gene annotation
						
							Zinc finger C-x8-C-x5-C-x3-H type family protein
							
						Parent gene strand
						-
					
						Alternative splicing
						
							AT1G19860_circ_g.2 						
					
						Support reads
						5
					
						Tissues
						root, inflorescences/leaf
					
						Exon boundary  
						
							No-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						AT1G19860.1:3
AT1G19860.2:3

General Information
CircRNA Name	AT1G19860_circ_g.1
ID in PlantcircBase	ath_circ_003459
Alias	Ath_circ_FC0438, AT1G19860_C1
Organism	Arabidpsis thaliana
Position	chr1: 6891713-6893236 JBrowse»
Reference genome	TAIR10.38
Type	e-circRNA
Identification method	CIRI, MapSplice, circRNA_finder, find_circ, CIRI2
Parent gene	AT1G19860
Parent gene annotation	Zinc finger C-x8-C-x5-C-x3-H type family protein
Parent gene strand	-
Alternative splicing	AT1G19860_circ_g.2
Support reads	5
Tissues	root, inflorescences/leaf
Exon boundary	No-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	AT1G19860.1:3 AT1G19860.2:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: GCCAAGGGATTCAAAACC
 R: ACCAGGTGGCAGATTATCA
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: GCCAAGGGATTCAAAACC R: ACCAGGTGGCAGATTATCA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAAC
TTGTGAAGGTGAATCCTCTGATATGAATAGCCGTACcattgtttagattcctcggctggtaggg
tgtagcatcgtgctggtacatacaattagctccatggcgacaaccccttgcgctgttgaagtac
atgcaagc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 161
Transcript exons: 6891713-6891805,6893169-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACAGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTG
TGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 195
Transcript exons: 6891713-6891818,6893148-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTGTGAAGCCAATGGTGACTTTG
CTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCG
TAC
Transcript length: 202
Transcript exons: 6891713-6891804,6893127-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACGGCAGATTATCATCACTTGGATGTGAAGCCAATGGT
GACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGA
ATAGCCGTAC
Transcript length: 205
Transcript exons: 6891713-6891770,6893090-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCGGACTC
ATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAAT
GGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATA
TGAATAGCCGTAC
Transcript length: 209
Transcript exons: 6891713-6891771,6893087-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCTGGG
ACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGC
CAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCT
GATATGAATAGCCGTAC
Transcript length: 220
Transcript exons: 6891713-6891870,6893175-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
GGCCTCTGGTTATTATTACTGCTATTTACCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAG
GTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 241
Transcript exons: 6891713-6891804,6893088-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCA
GGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAG
ACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 245
Transcript exons: 6891713-6891732,6892614-6892666,6893065-6893236
CATTGTTTAGATTCCTCGGCACTTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGA
ACTCTCAATGTGGGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAA
ACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCT
TGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 272
Transcript exons: 6891713-6891788,6893041-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTGGACGGAGCATTTCCACTTTATTAGTGGGATATCTGATAACTTAATCTGGGA
CTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCC
AATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTG
ATATGAATAGCCGTAC
Transcript length: 278
Transcript exons: 6891713-6891840,6893087-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
CTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGT
GAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAAT
CCTCTGATATGAATAGCCGTAC
Transcript length: 289
Transcript exons: 6891713-6891838,6893074-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCCT
GATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCAT
CACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTG
TGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 291
Transcript exons: 6891713-6891839,6893067-6893167,6893174-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTG
GGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAG
ATTATCATCACTTGGATGTGAAGCCAATGGTGACTTCAGGTGATCTTGAGACTCTGATCCAACT
TGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 299
Transcript exons: 6891713-6891849,6893075-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
GGCCTCTGGTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGC
AGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTG
ATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 309
Transcript exons: 6891713-6891838,6892614-6892719,6893160-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCAC
TTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGAACTCTCAATTCCCTCTCATTTT
GGGCCTCCACTTCTTTGCTTTCGTCCCCTGCAACCACTTTGGTGACTTTGCTTGCAGGTGATCT
TGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 316
Transcript exons: 6891713-6891878,6893087-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGCTGGGACTCATTCGCAGAAAAGGGTC
CACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAG
GTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 364
Transcript exons: 6891713-6891887,6893041-6893141,6893149-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGGTTAGGTCCGGACGGAGCATTTCCAC
TTTATTAGTGGGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAAC
CAGGTGGCAGATTATCATCAGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCT
GATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 425
Transcript exons: 6891713-6891855,6892614-6892699,6893041-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
GGCCTCTGGTTATTAACTTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGAACTCT
CAATTCCCTCTCATTTTGGGCCTCCACTTCTTTGCTTGGACGGAGCATTTCCACTTTATTAGTG
GGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAG
ATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGAT
CCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Transcript length: 438
Transcript exons: 6891713-6891890,6892614-6892723,6893087-6893236
CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGGTTAGGTCCTCCACTTTGGAGGAATA
GATGATGCGCCAGGATAAAATGCTTCAAGAACTCTCAATTCCCTCTCATTTTGGGCCTCCACTT
CTTTGCTTTCGTCCCCTGCAACCACTTTCCATCTGGGACTCATTCGCAGAAAAGGGTCCACCAA
AACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATC
TTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
						
					

						Genomic sequence
						
							CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG
GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT
GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGGTTAGGTCCTCCTCCAGGTTGGAGGT
TGTATCGATAACCGAGATGTTGAACTGGCGGCGTCTCTTGTCTATCCCCGCCATGTTGCTGAAT
CAGGTTCTTGTAATAACTAGCATCTCTTGCTGGCGGTGCTCCATAGTTCGGTTGGTCTTGAGGA
GCGTGAGGAGTATACGCCATGGGAGGAATATGAGTTATGGGTGGCTGAGCGTAAAATTGTCCAT
TTGAGGAAATAGGTGCCGTGGTTACTACTCCGTTGGCTTCATGTGTTGAAGATGAGTAGAGGCT
ACTTGTGTTGGAGGAGACTGAACCTGCACTGCCACGATTTGCAACAAGATTCTCGACCAACTTA
GGGTTGCTTAGGATTTTAATAAGCAGATCTTGGTCGATCATACTGCCTTGTTCTTTGCTGTTTG
AGATTGCAGATAACGCAGCCATTATATCTGGCCCTGCAGGGAGGGTTGAAGAAGTTGATGTGTT
CTCATCGGTTATTGATGGCTCTGTTCCCACATCCACGCCAGATTGGGTTGGGAAATCAGATGCT
GAATCCATCGCTATGTCATCATCTTCTACAGGTAGGATGGGTATGACAATGGTTTGCTGATCAT
CATGATGTGAGTCCTCAACATCAGCTGGAACCGAAGGGCTGCAGATTGGAGTTTAAGAAAAGGC
CCAAGTCAAAAAAAAAAGTAAAAGGGTATGCAAATGTGTGTTGGAAGAATATGTAGGGGTTAGA
TACGGACTTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGAACTCTCAATTCCCTC
TCATTTTGGGCCTCCACTTCTTTGCTTTCGTCCCCTGCAACCACTTTCCATTCCCGATCTAGCA
GAATCTGCAAAAGCACATGTTATCTACAGTATTAGTGCCACTATCGTAAGGGTTGAACATCCTC
AACTAGATTAACAGGAAATACAATCCTACATGGGTAACCCAACCAAGAGCACCTTACCACCATA
TTTACCAAATGTGACCCATACCCTTATCCAACTTAAAGGACTAGAGGAAAACATATGTATATAT
GTAAACTATAACTGTAAATATCTTGGCATTTTGGGGGAATTGTAATTAGTACTTTAAAAAGTTG
ATGATTCTAACTAAAAAGGCTTAAGGAGTGCGACCCGAGAACTCACCTGGACGGAGCATTTCCA
CTTTATTAGTGGGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAA
CCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTT
GAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
						
					

			
		

Sequences
Splice junction sequence	CATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAAC TTGTGAAGGTGAATCCTCTGATATGAATAGCCGTACcattgtttagattcctcggctggtaggg tgtagcatcgtgctggtacatacaattagctccatggcgacaaccccttgcgctgttgaagtac atgcaagc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 161 Transcript exons: 6891713-6891805,6893169-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACAGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTG TGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 195 Transcript exons: 6891713-6891818,6893148-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTGTGAAGCCAATGGTGACTTTG CTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCG TAC Transcript length: 202 Transcript exons: 6891713-6891804,6893127-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACGGCAGATTATCATCACTTGGATGTGAAGCCAATGGT GACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGA ATAGCCGTAC Transcript length: 205 Transcript exons: 6891713-6891770,6893090-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCGGACTC ATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAAT GGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATA TGAATAGCCGTAC Transcript length: 209 Transcript exons: 6891713-6891771,6893087-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCTGGG ACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGC CAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCT GATATGAATAGCCGTAC Transcript length: 220 Transcript exons: 6891713-6891870,6893175-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT GGCCTCTGGTTATTATTACTGCTATTTACCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAG GTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 241 Transcript exons: 6891713-6891804,6893088-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCA GGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAG ACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 245 Transcript exons: 6891713-6891732,6892614-6892666,6893065-6893236 CATTGTTTAGATTCCTCGGCACTTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGA ACTCTCAATGTGGGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAA ACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCT TGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 272 Transcript exons: 6891713-6891788,6893041-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTGGACGGAGCATTTCCACTTTATTAGTGGGATATCTGATAACTTAATCTGGGA CTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCC AATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTG ATATGAATAGCCGTAC Transcript length: 278 Transcript exons: 6891713-6891840,6893087-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT CTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCATCACTTGGATGT GAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAAT CCTCTGATATGAATAGCCGTAC Transcript length: 289 Transcript exons: 6891713-6891838,6893074-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCCT GATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAGATTATCAT CACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGATCCAACTTG TGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 291 Transcript exons: 6891713-6891839,6893067-6893167,6893174-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTG GGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAG ATTATCATCACTTGGATGTGAAGCCAATGGTGACTTCAGGTGATCTTGAGACTCTGATCCAACT TGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 299 Transcript exons: 6891713-6891849,6893075-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT GGCCTCTGGTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGC AGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTG ATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 309 Transcript exons: 6891713-6891838,6892614-6892719,6893160-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCAC TTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGAACTCTCAATTCCCTCTCATTTT GGGCCTCCACTTCTTTGCTTTCGTCCCCTGCAACCACTTTGGTGACTTTGCTTGCAGGTGATCT TGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 316 Transcript exons: 6891713-6891878,6893087-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGCTGGGACTCATTCGCAGAAAAGGGTC CACCAAAACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAG GTGATCTTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 364 Transcript exons: 6891713-6891887,6893041-6893141,6893149-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGGTTAGGTCCGGACGGAGCATTTCCAC TTTATTAGTGGGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAAC CAGGTGGCAGATTATCATCAGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCT GATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 425 Transcript exons: 6891713-6891855,6892614-6892699,6893041-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT GGCCTCTGGTTATTAACTTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGAACTCT CAATTCCCTCTCATTTTGGGCCTCCACTTCTTTGCTTGGACGGAGCATTTCCACTTTATTAGTG GGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAACCAGGTGGCAG ATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTTGAGACTCTGAT CCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC Transcript length: 438 Transcript exons: 6891713-6891890,6892614-6892723,6893087-6893236 CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGGTTAGGTCCTCCACTTTGGAGGAATA GATGATGCGCCAGGATAAAATGCTTCAAGAACTCTCAATTCCCTCTCATTTTGGGCCTCCACTT CTTTGCTTTCGTCCCCTGCAACCACTTTCCATCTGGGACTCATTCGCAGAAAAGGGTCCACCAA AACCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATC TTGAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC
Genomic sequence	CATTGTTTAGATTCCTCGGCTGGTAGGGTGTAGCATCGTGCTGGTACATACAATTAGCTCCATG GCGACAACCCCTTGCGCTGTTGAAGTACATGCAAGCCTTCATTATCTTGGGTTTTGAATCCCTT GGCCTCTGGTTATTATTACTGCTATTTACCATCTCCGGGTTAGGTCCTCCTCCAGGTTGGAGGT TGTATCGATAACCGAGATGTTGAACTGGCGGCGTCTCTTGTCTATCCCCGCCATGTTGCTGAAT CAGGTTCTTGTAATAACTAGCATCTCTTGCTGGCGGTGCTCCATAGTTCGGTTGGTCTTGAGGA GCGTGAGGAGTATACGCCATGGGAGGAATATGAGTTATGGGTGGCTGAGCGTAAAATTGTCCAT TTGAGGAAATAGGTGCCGTGGTTACTACTCCGTTGGCTTCATGTGTTGAAGATGAGTAGAGGCT ACTTGTGTTGGAGGAGACTGAACCTGCACTGCCACGATTTGCAACAAGATTCTCGACCAACTTA GGGTTGCTTAGGATTTTAATAAGCAGATCTTGGTCGATCATACTGCCTTGTTCTTTGCTGTTTG AGATTGCAGATAACGCAGCCATTATATCTGGCCCTGCAGGGAGGGTTGAAGAAGTTGATGTGTT CTCATCGGTTATTGATGGCTCTGTTCCCACATCCACGCCAGATTGGGTTGGGAAATCAGATGCT GAATCCATCGCTATGTCATCATCTTCTACAGGTAGGATGGGTATGACAATGGTTTGCTGATCAT CATGATGTGAGTCCTCAACATCAGCTGGAACCGAAGGGCTGCAGATTGGAGTTTAAGAAAAGGC CCAAGTCAAAAAAAAAAGTAAAAGGGTATGCAAATGTGTGTTGGAAGAATATGTAGGGGTTAGA TACGGACTTTGGAGGAATAGATGATGCGCCAGGATAAAATGCTTCAAGAACTCTCAATTCCCTC TCATTTTGGGCCTCCACTTCTTTGCTTTCGTCCCCTGCAACCACTTTCCATTCCCGATCTAGCA GAATCTGCAAAAGCACATGTTATCTACAGTATTAGTGCCACTATCGTAAGGGTTGAACATCCTC AACTAGATTAACAGGAAATACAATCCTACATGGGTAACCCAACCAAGAGCACCTTACCACCATA TTTACCAAATGTGACCCATACCCTTATCCAACTTAAAGGACTAGAGGAAAACATATGTATATAT GTAAACTATAACTGTAAATATCTTGGCATTTTGGGGGAATTGTAATTAGTACTTTAAAAAGTTG ATGATTCTAACTAAAAAGGCTTAAGGAGTGCGACCCGAGAACTCACCTGGACGGAGCATTTCCA CTTTATTAGTGGGATATCTGATAACTTAATCTGGGACTCATTCGCAGAAAAGGGTCCACCAAAA CCAGGTGGCAGATTATCATCACTTGGATGTGAAGCCAATGGTGACTTTGCTTGCAGGTGATCTT GAGACTCTGATCCAACTTGTGAAGGTGAATCCTCTGATATGAATAGCCGTAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.655224256

Conservation Information
Conserved circRNAs	NA
PMCS	0.655224256

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						response to drought stress; regulation of development and senescence of leaves(validated)

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	response to drought stress; regulation of development and senescence of leaves(validated)

			
						 Other Information
					
						References
						Chu et al., 2017;Chen et al., 2017a;Liu et al., 2017;Zhang et al., 2019

circRNA

Detail information of AT1G19860_circ_g.1

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