Plant Circular RNA Database

Detail information of Os01g0779400_circ_g.6

			
						 General Information
					
						CircRNA Name
						Os01g0779400_circ_g.6
					
						ID in PlantcircBase
						osa_circ_004211
					
						Alias
						Os_ciR6169
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 33004198-33007095  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, find_circ
					
						Parent gene
						
							Os01g0779400						
					
						Parent gene annotation
						
							Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01
t0779400-01);Similar to chromatin remodeling complex subunit. (O
s01t0779400-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os01g0779400_circ_g.3 Os01g0779400_circ_g.4 Os01g0779400_circ_g.5 Os01g0779400_circ_g.7 Os01g0779400_circ_g.8 Os01g0779400_circ_g.9 						
					
						Support reads
						2/1
					
						Tissues
						root/root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0779400-02:4
Os01t0779400-01:4

General Information
CircRNA Name	Os01g0779400_circ_g.6
ID in PlantcircBase	osa_circ_004211
Alias	Os_ciR6169
Organism	Oryza sativa
Position	chr1: 33004198-33007095 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, find_circ
Parent gene	Os01g0779400
Parent gene annotation	Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01 t0779400-01);Similar to chromatin remodeling complex subunit. (O s01t0779400-02)
Parent gene strand	-
Alternative splicing	Os01g0779400_circ_g.3 Os01g0779400_circ_g.4 Os01g0779400_circ_g.5 Os01g0779400_circ_g.7 Os01g0779400_circ_g.8 Os01g0779400_circ_g.9
Support reads	2/1
Tissues	root/root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0779400-02:4 Os01t0779400-01:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGTTACCCTCCTGCTCAGAATTACCAAGCATGGGACCTGTGCCCTCACATTTAACTTCACTTA
AACCAGATTGCTCTGCGAACATATCACATCCCGAATcttttgtcctcctcagcattactgtctt
cagaacaacctgaagcttcttgtacccagtaattgggttcctgctgattggtgtttttatcatg
aagcaaaa

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1989
Transcript exons: 33004198-33005095,33005195-33005272,33005354-33005425,33
006155-33007095
CTTTTGTCCTCCTCAGCATTACTGTCTTCAGAACAACCTGAAGCTTCTTGTACCCAGTAATTGG
GTTCCTGCTGATTGGTGTTTTTATCATGAAGCAAAATTTTTTGTATTCAGCATATGGATCATAT
CTGAGAAATCTGAAATAGCTATAGAGATCCTCAACAGCATTCTGTATAGGTGTCCCTGACAAGC
ACCATCTTCTTTTGGCTCGCAGACCCCAGCATGCCCTAGCAACCTGGGTTCGATAATTTTTAAT
ACTTTGTGCTTCATCAAGGATAACTCTAAACCATGCAACTTTTGCGAGAGGTTTCTCAGGCAAT
TTACTCTCTGGTGTGCTTCCACTTTTGTTCTTCTTAGAAGAGGAAGTCTTCCGTTTTTTGCTGC
CTGAGGAGCCAACAGGAGCACCATACCTGTCAGGCTTCCCTTTCTCTTCATCATCACTATCAGG
ACTTGATTGTTTTGGTACTTCCATGCTTACTATAGAATATGTGGTTAACACGACATCGTATTTA
GTAAGATCATTAGGATCCTTTGTGCGGTTGCTACCATGATATACTAAAAAGGTCAAGTTAGCTT
TACTGGTGACTTTATTCCTCAGTTCATCTGCCCACTGACGTAGAACACTCGTGGGGCAAACAAC
CAAAGTCCCAGCAGCTGGTCTAGCCTTAACATTTGCAATAGGATTTTCTGTCTTAATGGTACTA
CTTGTCGCTTCAGGTTTACATGTATCTGCTAGATGTGCTAGTGCCGGTTTCTTCAAATGAGGCT
CAGCATCGTCATCCTCATCGTCATCGTCAAGGGTTACAGCTTCGCATGGTTCTTGCTTAACAGC
TGAAGATGGAACTGGTGACCTTTCTGTCAAAATCAGTGATATAGTCGACACTGTTTTACCCAGG
CCCTGATCATCTGCAAGAATTCCGCCAGAGCAACTCGAACCATTTCTCTCCTTTTGTACCATCC
ATGACAAGGCAATTTTCTGGTGCCTCAATAAAGGAACTGCTAAAACTCCATCAGGTGGATTAGC
CTCAGACTTTGGCTGAGAAATATCCTGTAATGCAAGCCGCAAAGTCATTCTTTCCTCATGCGGC
CTGTATCTCCCTCCAAACCGAGGAAGATTAGGATTGGCACACACAGATTGTTGAAAGTTATGCT
GCAATCCTTGGGGTGGCAACACATGTCCACTAGCAAGACTTCTACTACCCTCAAGAATACATAA
ATCAGAATCACGATTGCTATCTAAACTGAAGCAATTCCTTGATGAGTTACCCAGAATAGAAGAG
CTGCCATTTCTAGGAATGTCATACTTTTTATGAAAAGTTGGATGCATTGGATCACTTGAGTTCA
TGAATGAGTGTTGGTGTTGGGTACTGACAGGAAACATGGAATTCTGCAAATGTTTTGGTGCATC
TCCAAAGTATTTATCAGCATCCTCAGTGGTGGAGTTTCTGCTTGAGGGCACCGGAGAAGAGTCA
GTGCTAGACTCACTCCGGAAACAGATATCTTCTGATCGGTTCTGCTCGCTGGACATCGACTCTA
TCGAAGATACATCATCCATGTAATAATCCGACAGAGATGTATCATCACAATATTGATCTGGAGA
GCCCACTTGCATTGAACTGCTTTCACATATATTCTGTGGTAATTGTTCCAGCTCATATGACTGA
TTGTTTTGTGGCAAATCATGCAGCACTATTTCATTAGCCATATCAAACGATCCATAATCTGGCT
GAGGATACTCCTGATACTCCCCCTGCAGATATTCTCCTTGTACAGTTAGGCAACTGCCATTTCC
ATTCTGCATGCTTCCAGGCACATCACCGATGTTCAACTCGGTGTAAGGAATATCAGGTATAACA
GCACTATGGTCAAACATAGGCACTGACGTGAAATGGTTACCCTCCTGCTCAGAATTACCAAGCA
TGGGACCTGTGCCCTCACATTTAACTTCACTTAAACCAGATTGCTCTGCGAACATATCACATCC
CGAAT
						
					

						Genomic sequence
						
							CTTTTGTCCTCCTCAGCATTACTGTCTTCAGAACAACCTGAAGCTTCTTGTACCCAGTAATTGG
GTTCCTGCTGATTGGTGTTTTTATCATGAAGCAAAATTTTTTGTATTCAGCATATGGATCATAT
CTGAGAAATCTGAAATAGCTATAGAGATCCTCAACAGCATTCTGTATAGGTGTCCCTGACAAGC
ACCATCTTCTTTTGGCTCGCAGACCCCAGCATGCCCTAGCAACCTGGGTTCGATAATTTTTAAT
ACTTTGTGCTTCATCAAGGATAACTCTAAACCATGCAACTTTTGCGAGAGGTTTCTCAGGCAAT
TTACTCTCTGGTGTGCTTCCACTTTTGTTCTTCTTAGAAGAGGAAGTCTTCCGTTTTTTGCTGC
CTGAGGAGCCAACAGGAGCACCATACCTGTCAGGCTTCCCTTTCTCTTCATCATCACTATCAGG
ACTTGATTGTTTTGGTACTTCCATGCTTACTATAGAATATGTGGTTAACACGACATCGTATTTA
GTAAGATCATTAGGATCCTTTGTGCGGTTGCTACCATGATATACTAAAAAGGTCAAGTTAGCTT
TACTGGTGACTTTATTCCTCAGTTCATCTGCCCACTGACGTAGAACACTCGTGGGGCAAACAAC
CAAAGTCCCAGCAGCTGGTCTAGCCTTAACATTTGCAATAGGATTTTCTGTCTTAATGGTACTA
CTTGTCGCTTCAGGTTTACATGTATCTGCTAGATGTGCTAGTGCCGGTTTCTTCAAATGAGGCT
CAGCATCGTCATCCTCATCGTCATCGTCAAGGGTTACAGCTTCGCATGGTTCTTGCTTAACAGC
TGAAGATGGAACTGGTGACCTTTCTGTCAAAATCAGTGATATAGTCGACACTGTTTTACCCAGG
CCCTGAAAAATATCAGATCATAAATTAGGACAGTTGCCCTTTTGGCTCAATCCTGCATGTGGGC
TTGGGTGTGGACTGTGGAGTGAGGTAAACTAGCATACCTGATCATCTGCAAGAATTCCGCCAGA
GCAACTCGAACCATTTCTCTCCTTTTGTACCATCCATGACAAGGCAATTTTCTGACAAAAAGAT
ATATCGAAATCAGAAGTTGGCTGAAGTACTATTTCTTAGGGAGTAACAGCTTTGGTTTCAAAGT
GTACCTGGTGCCTCAATAAAGGAACTGCTAAAACTCCATCAGGTGGATTAGCCTCAGACTTTGG
CTGAGAAATATCCTGCCCATCATCCAATTGGTTAAGTACATTGAAGAAAAACTTACAAGCAAAC
TGGATGCAAGAGGTGCATCAAGTAATGGCTAAAAAAGTATCAACACATACAGCATAACACAAGG
CTAACAAAAAAAGGGAACTAAATGCCACATATATATCACATGAAATAACATTCACAAAGTCACC
AGTTATATCCAATGCAGACAAAAGGTCAAAAATCAATGTTTAACAGCATCACAGTGCAGAAAAG
GTTGAAAACATAAGCACCAGCAGTTATCTATACTCTAGTGGTGGAGGTGGTTCTGCCGCAGCCC
ACCACTACTAATTTTGCATGTTTTACAAATTATTCCCTGATATTTTCTGATATATGCAATAATT
TAATATTTGTTTGATTTAAGTGAATAACATATATTGTAATAAGCATTGGAAAAGCAAAGAATGG
GAATTTTACCCATAGAAAAGCATGGACATTTTGCTAGTTAACACAAAATGGTCTTCTGTTTGCA
AGACAACTACAGAAAATATATAAGGCAAATATCTTCATAAGAAAATCATACATTCTCCTCTGTT
TTAGTGACCAGAAACATGATAACAAATCAAACCTCAAGCAGTTTAGTTGCCTGTTCCTTTGGGT
TAGGCAAAAAAAGGGACTAAAAAAGGTTTAAAAAAAACCACCTTGTTTGTTTATGGTACTTCAA
TGAGCAAGTGCCGCCAAGAGTAAAAAGGGTAAATTACCTGTAATGCAAGCCGCAAAGTCATTCT
TTCCTCATGCGGCCTGTATCTCCCTCCAAACCGAGGAAGATTAGGATTGGCACACACAGATTGT
TGAAAGTTATGCTGCAATCCTTGGGGTGGCAACACATGTCCACTAGCAAGACTTCTACTACCCT
CAAGAATACATAAATCAGAATCACGATTGCTATCTAAACTGAAGCAATTCCTTGATGAGTTACC
CAGAATAGAAGAGCTGCCATTTCTAGGAATGTCATACTTTTTATGAAAAGTTGGATGCATTGGA
TCACTTGAGTTCATGAATGAGTGTTGGTGTTGGGTACTGACAGGAAACATGGAATTCTGCAAAT
GTTTTGGTGCATCTCCAAAGTATTTATCAGCATCCTCAGTGGTGGAGTTTCTGCTTGAGGGCAC
CGGAGAAGAGTCAGTGCTAGACTCACTCCGGAAACAGATATCTTCTGATCGGTTCTGCTCGCTG
GACATCGACTCTATCGAAGATACATCATCCATGTAATAATCCGACAGAGATGTATCATCACAAT
ATTGATCTGGAGAGCCCACTTGCATTGAACTGCTTTCACATATATTCTGTGGTAATTGTTCCAG
CTCATATGACTGATTGTTTTGTGGCAAATCATGCAGCACTATTTCATTAGCCATATCAAACGAT
CCATAATCTGGCTGAGGATACTCCTGATACTCCCCCTGCAGATATTCTCCTTGTACAGTTAGGC
AACTGCCATTTCCATTCTGCATGCTTCCAGGCACATCACCGATGTTCAACTCGGTGTAAGGAAT
ATCAGGTATAACAGCACTATGGTCAAACATAGGCACTGACGTGAAATGGTTACCCTCCTGCTCA
GAATTACCAAGCATGGGACCTGTGCCCTCACATTTAACTTCACTTAAACCAGATTGCTCTGCGA
ACATATCACATCCCGAAT
						
					

			
		

Sequences
Splice junction sequence	TGGTTACCCTCCTGCTCAGAATTACCAAGCATGGGACCTGTGCCCTCACATTTAACTTCACTTA AACCAGATTGCTCTGCGAACATATCACATCCCGAATcttttgtcctcctcagcattactgtctt cagaacaacctgaagcttcttgtacccagtaattgggttcctgctgattggtgtttttatcatg aagcaaaa
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1989 Transcript exons: 33004198-33005095,33005195-33005272,33005354-33005425,33 006155-33007095 CTTTTGTCCTCCTCAGCATTACTGTCTTCAGAACAACCTGAAGCTTCTTGTACCCAGTAATTGG GTTCCTGCTGATTGGTGTTTTTATCATGAAGCAAAATTTTTTGTATTCAGCATATGGATCATAT CTGAGAAATCTGAAATAGCTATAGAGATCCTCAACAGCATTCTGTATAGGTGTCCCTGACAAGC ACCATCTTCTTTTGGCTCGCAGACCCCAGCATGCCCTAGCAACCTGGGTTCGATAATTTTTAAT ACTTTGTGCTTCATCAAGGATAACTCTAAACCATGCAACTTTTGCGAGAGGTTTCTCAGGCAAT TTACTCTCTGGTGTGCTTCCACTTTTGTTCTTCTTAGAAGAGGAAGTCTTCCGTTTTTTGCTGC CTGAGGAGCCAACAGGAGCACCATACCTGTCAGGCTTCCCTTTCTCTTCATCATCACTATCAGG ACTTGATTGTTTTGGTACTTCCATGCTTACTATAGAATATGTGGTTAACACGACATCGTATTTA GTAAGATCATTAGGATCCTTTGTGCGGTTGCTACCATGATATACTAAAAAGGTCAAGTTAGCTT TACTGGTGACTTTATTCCTCAGTTCATCTGCCCACTGACGTAGAACACTCGTGGGGCAAACAAC CAAAGTCCCAGCAGCTGGTCTAGCCTTAACATTTGCAATAGGATTTTCTGTCTTAATGGTACTA CTTGTCGCTTCAGGTTTACATGTATCTGCTAGATGTGCTAGTGCCGGTTTCTTCAAATGAGGCT CAGCATCGTCATCCTCATCGTCATCGTCAAGGGTTACAGCTTCGCATGGTTCTTGCTTAACAGC TGAAGATGGAACTGGTGACCTTTCTGTCAAAATCAGTGATATAGTCGACACTGTTTTACCCAGG CCCTGATCATCTGCAAGAATTCCGCCAGAGCAACTCGAACCATTTCTCTCCTTTTGTACCATCC ATGACAAGGCAATTTTCTGGTGCCTCAATAAAGGAACTGCTAAAACTCCATCAGGTGGATTAGC CTCAGACTTTGGCTGAGAAATATCCTGTAATGCAAGCCGCAAAGTCATTCTTTCCTCATGCGGC CTGTATCTCCCTCCAAACCGAGGAAGATTAGGATTGGCACACACAGATTGTTGAAAGTTATGCT GCAATCCTTGGGGTGGCAACACATGTCCACTAGCAAGACTTCTACTACCCTCAAGAATACATAA ATCAGAATCACGATTGCTATCTAAACTGAAGCAATTCCTTGATGAGTTACCCAGAATAGAAGAG CTGCCATTTCTAGGAATGTCATACTTTTTATGAAAAGTTGGATGCATTGGATCACTTGAGTTCA TGAATGAGTGTTGGTGTTGGGTACTGACAGGAAACATGGAATTCTGCAAATGTTTTGGTGCATC TCCAAAGTATTTATCAGCATCCTCAGTGGTGGAGTTTCTGCTTGAGGGCACCGGAGAAGAGTCA GTGCTAGACTCACTCCGGAAACAGATATCTTCTGATCGGTTCTGCTCGCTGGACATCGACTCTA TCGAAGATACATCATCCATGTAATAATCCGACAGAGATGTATCATCACAATATTGATCTGGAGA GCCCACTTGCATTGAACTGCTTTCACATATATTCTGTGGTAATTGTTCCAGCTCATATGACTGA TTGTTTTGTGGCAAATCATGCAGCACTATTTCATTAGCCATATCAAACGATCCATAATCTGGCT GAGGATACTCCTGATACTCCCCCTGCAGATATTCTCCTTGTACAGTTAGGCAACTGCCATTTCC ATTCTGCATGCTTCCAGGCACATCACCGATGTTCAACTCGGTGTAAGGAATATCAGGTATAACA GCACTATGGTCAAACATAGGCACTGACGTGAAATGGTTACCCTCCTGCTCAGAATTACCAAGCA TGGGACCTGTGCCCTCACATTTAACTTCACTTAAACCAGATTGCTCTGCGAACATATCACATCC CGAAT
Genomic sequence	CTTTTGTCCTCCTCAGCATTACTGTCTTCAGAACAACCTGAAGCTTCTTGTACCCAGTAATTGG GTTCCTGCTGATTGGTGTTTTTATCATGAAGCAAAATTTTTTGTATTCAGCATATGGATCATAT CTGAGAAATCTGAAATAGCTATAGAGATCCTCAACAGCATTCTGTATAGGTGTCCCTGACAAGC ACCATCTTCTTTTGGCTCGCAGACCCCAGCATGCCCTAGCAACCTGGGTTCGATAATTTTTAAT ACTTTGTGCTTCATCAAGGATAACTCTAAACCATGCAACTTTTGCGAGAGGTTTCTCAGGCAAT TTACTCTCTGGTGTGCTTCCACTTTTGTTCTTCTTAGAAGAGGAAGTCTTCCGTTTTTTGCTGC CTGAGGAGCCAACAGGAGCACCATACCTGTCAGGCTTCCCTTTCTCTTCATCATCACTATCAGG ACTTGATTGTTTTGGTACTTCCATGCTTACTATAGAATATGTGGTTAACACGACATCGTATTTA GTAAGATCATTAGGATCCTTTGTGCGGTTGCTACCATGATATACTAAAAAGGTCAAGTTAGCTT TACTGGTGACTTTATTCCTCAGTTCATCTGCCCACTGACGTAGAACACTCGTGGGGCAAACAAC CAAAGTCCCAGCAGCTGGTCTAGCCTTAACATTTGCAATAGGATTTTCTGTCTTAATGGTACTA CTTGTCGCTTCAGGTTTACATGTATCTGCTAGATGTGCTAGTGCCGGTTTCTTCAAATGAGGCT CAGCATCGTCATCCTCATCGTCATCGTCAAGGGTTACAGCTTCGCATGGTTCTTGCTTAACAGC TGAAGATGGAACTGGTGACCTTTCTGTCAAAATCAGTGATATAGTCGACACTGTTTTACCCAGG CCCTGAAAAATATCAGATCATAAATTAGGACAGTTGCCCTTTTGGCTCAATCCTGCATGTGGGC TTGGGTGTGGACTGTGGAGTGAGGTAAACTAGCATACCTGATCATCTGCAAGAATTCCGCCAGA GCAACTCGAACCATTTCTCTCCTTTTGTACCATCCATGACAAGGCAATTTTCTGACAAAAAGAT ATATCGAAATCAGAAGTTGGCTGAAGTACTATTTCTTAGGGAGTAACAGCTTTGGTTTCAAAGT GTACCTGGTGCCTCAATAAAGGAACTGCTAAAACTCCATCAGGTGGATTAGCCTCAGACTTTGG CTGAGAAATATCCTGCCCATCATCCAATTGGTTAAGTACATTGAAGAAAAACTTACAAGCAAAC TGGATGCAAGAGGTGCATCAAGTAATGGCTAAAAAAGTATCAACACATACAGCATAACACAAGG CTAACAAAAAAAGGGAACTAAATGCCACATATATATCACATGAAATAACATTCACAAAGTCACC AGTTATATCCAATGCAGACAAAAGGTCAAAAATCAATGTTTAACAGCATCACAGTGCAGAAAAG GTTGAAAACATAAGCACCAGCAGTTATCTATACTCTAGTGGTGGAGGTGGTTCTGCCGCAGCCC ACCACTACTAATTTTGCATGTTTTACAAATTATTCCCTGATATTTTCTGATATATGCAATAATT TAATATTTGTTTGATTTAAGTGAATAACATATATTGTAATAAGCATTGGAAAAGCAAAGAATGG GAATTTTACCCATAGAAAAGCATGGACATTTTGCTAGTTAACACAAAATGGTCTTCTGTTTGCA AGACAACTACAGAAAATATATAAGGCAAATATCTTCATAAGAAAATCATACATTCTCCTCTGTT TTAGTGACCAGAAACATGATAACAAATCAAACCTCAAGCAGTTTAGTTGCCTGTTCCTTTGGGT TAGGCAAAAAAAGGGACTAAAAAAGGTTTAAAAAAAACCACCTTGTTTGTTTATGGTACTTCAA TGAGCAAGTGCCGCCAAGAGTAAAAAGGGTAAATTACCTGTAATGCAAGCCGCAAAGTCATTCT TTCCTCATGCGGCCTGTATCTCCCTCCAAACCGAGGAAGATTAGGATTGGCACACACAGATTGT TGAAAGTTATGCTGCAATCCTTGGGGTGGCAACACATGTCCACTAGCAAGACTTCTACTACCCT CAAGAATACATAAATCAGAATCACGATTGCTATCTAAACTGAAGCAATTCCTTGATGAGTTACC CAGAATAGAAGAGCTGCCATTTCTAGGAATGTCATACTTTTTATGAAAAGTTGGATGCATTGGA TCACTTGAGTTCATGAATGAGTGTTGGTGTTGGGTACTGACAGGAAACATGGAATTCTGCAAAT GTTTTGGTGCATCTCCAAAGTATTTATCAGCATCCTCAGTGGTGGAGTTTCTGCTTGAGGGCAC CGGAGAAGAGTCAGTGCTAGACTCACTCCGGAAACAGATATCTTCTGATCGGTTCTGCTCGCTG GACATCGACTCTATCGAAGATACATCATCCATGTAATAATCCGACAGAGATGTATCATCACAAT ATTGATCTGGAGAGCCCACTTGCATTGAACTGCTTTCACATATATTCTGTGGTAATTGTTCCAG CTCATATGACTGATTGTTTTGTGGCAAATCATGCAGCACTATTTCATTAGCCATATCAAACGAT CCATAATCTGGCTGAGGATACTCCTGATACTCCCCCTGCAGATATTCTCCTTGTACAGTTAGGC AACTGCCATTTCCATTCTGCATGCTTCCAGGCACATCACCGATGTTCAACTCGGTGTAAGGAAT ATCAGGTATAACAGCACTATGGTCAAACATAGGCACTGACGTGAAATGGTTACCCTCCTGCTCA GAATTACCAAGCATGGGACCTGTGCCCTCACATTTAACTTCACTTAAACCAGATTGCTCTGCGA ACATATCACATCCCGAAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.258177677

Conservation Information
Conserved circRNAs	NA
PMCS	0.258177677

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							33007027-33004235(+)
33007083-33004200(-)
						
					

						Potential amino acid sequence
						
							MGPVPSHLTSLKPDCSANISHPESFVLLSITVFRTT*(+)
MFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAVIPDIPYTELNIGDVPGSMQNGNG
SCLTVQGEYLQGEYQEYPQPDYGSFDMANEIVLHDLPQNNQSYELEQLPQNICESSSMQVGSPD
QYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTDSSPVPSSRNSTTEDADKYFGDAP
KHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSDLCI
LEGSRSLASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRPHEERMTLRLALQDISQPKSEANP
PDGVLAVPLLRHQKIALSWMVQKERNGSSCSGGILADDQGLGKTVSTISLILTERSPVPSSAVK
QEPCEAVTLDDDDEDDDAEPHLKKPALAHLADTCKPEATSSTIKTENPIANVKARPAAGTLVVC
PTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTKYDVVLTTYSIVSMEVPKQSSPDS
DDEEKGKPDRYGAPVGSSGSKKRKTSSSKKNKSGSTPESKLPEKPLAKVAWFRVILDEAQSIKN
YRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRYDPYAEYKKFCFMIKTPISRNPIT
GYKKLQVVLKTVMLRRTKDSGCDMFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAV
IPDIPYTELNIGDVPGSMQNGNGSCLTVQGEYLQGEYQEYPQPDYGSFDMANEIVLHDLPQNNQ
SYELEQLPQNICESSSMQVGSPDQYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTD
SSPVPSSRNSTTEDADKYFGDAPKHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSS
SILGNSSRNCFSLDSNRDSDLCILEGSRSLASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRP
HEERMTLRLALQDISQPKSEANPPDGVLAVPLLRHQKIALSWMVQKERNGSSCSGGILADDQGL
GKTVSTISLILTERSPVPSSAVKQEPCEAVTLDDDDEDDDAEPHLKKPALAHLADTCKPEATSS
TIKTENPIANVKARPAAGTLVVCPTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTK
YDVVLTTYSIVSMEVPKQSSPDSDDEEKGKPDRYGAPVGSSGSKKRKTSSSKKNKSGSTPESKL
PEKPLAKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRY
DPYAEYKKFCFMIKTPISRNPITGYKKLQVVLKTVMLRRTKDSGCDMFAEQSGLSEVKCEGTGP
MLGNSEQEGNHFTSVPMFDHSAVIPDIPYTELNIGDVPGSMQNGNGSCLTVQGEYLQGEYQEYP
QPDYGSFDMANEIVLHDLPQNNQSYELEQLPQNICESSSMQVGSPDQYCDDTSLSDYYMDDVSS
IESMSSEQNRSEDICFRSESSTDSSPVPSSRNSTTEDADKYFGDAPKHLQNSMFPVSTQHQHSF
MNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSDLCILEGSRSLASGHVLPPQGL
QHNFQQSVCANPNLPRFGGRYRPHEERMTLRLALQDISQPKSEANPPDGVLAVPLLRHQKIALS
WMVQKERNGSSCSGGILADDQGLGKTVSTISLILTERSPVPSSAVKQEPCEAVTLDDDDEDDDA
EPHLKKPALAHLADTCKPEATSSTIKTENPIANVKARPAAGTLVVCPTSVLRQWADELRNKVTS
KANLTFLVYHGSNRTKDPNDLTKYDVVLTTYSIVSMEVPKQSSPDSDDEEKGKPDRYGAPVGSS
GSKKRKTSSSKKNKSGSTPESKLPEKPLAKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRW
CLSGTPIQNAVEDLYSYFRFLRYDPYAEYKKFCFMIKTPISRNPITGYKKLQVVLKTVMLRRTK
DSGCDMFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAVIPDIPYTELNIGDVPGSM
QNGNGSCLTVQGEYLQGEYQEYPQPDYGSFDMANEIVLHDLPQNNQSYELEQLPQNICESSSMQ
VGSPDQYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTDSSPVPSSRNSTTEDADKY
FGDAPKHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRD
SDLCILEGSRSLASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRPHEERMTLRLALQDISQPK
SEANPPDGVLAVPLLRHQKIALSWMVQKERNGSSCSGGILADDQGLGKTVSTISLILTERSPVP
SSAVKQEPCEAVTLDDDDEDDDAEPHLKKPALAHLADTCKPEATSSTIKTENPIANVKARPAAG
TLVVCPTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTKYDVVLTTYSIVSMEVPKQ
SSPDSDDEEKGKPDRYGAPVGSSGSKKRKTSSSKKNKSGSTPESKLPEKPLAKVAWFRVILDEA
QSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRYDPYAEYKKFCFMIKTPIS
RNPITGYKKLQVVLKTVMLRRTK(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	33007027-33004235(+) 33007083-33004200(-)
Potential amino acid sequence	MGPVPSHLTSLKPDCSANISHPESFVLLSITVFRTT*(+) MFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAVIPDIPYTELNIGDVPGSMQNGNG SCLTVQGEYLQGEYQEYPQPDYGSFDMANEIVLHDLPQNNQSYELEQLPQNICESSSMQVGSPD QYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTDSSPVPSSRNSTTEDADKYFGDAP KHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSDLCI LEGSRSLASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRPHEERMTLRLALQDISQPKSEANP PDGVLAVPLLRHQKIALSWMVQKERNGSSCSGGILADDQGLGKTVSTISLILTERSPVPSSAVK QEPCEAVTLDDDDEDDDAEPHLKKPALAHLADTCKPEATSSTIKTENPIANVKARPAAGTLVVC PTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTKYDVVLTTYSIVSMEVPKQSSPDS DDEEKGKPDRYGAPVGSSGSKKRKTSSSKKNKSGSTPESKLPEKPLAKVAWFRVILDEAQSIKN YRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRYDPYAEYKKFCFMIKTPISRNPIT GYKKLQVVLKTVMLRRTKDSGCDMFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAV IPDIPYTELNIGDVPGSMQNGNGSCLTVQGEYLQGEYQEYPQPDYGSFDMANEIVLHDLPQNNQ SYELEQLPQNICESSSMQVGSPDQYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTD SSPVPSSRNSTTEDADKYFGDAPKHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSS SILGNSSRNCFSLDSNRDSDLCILEGSRSLASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRP HEERMTLRLALQDISQPKSEANPPDGVLAVPLLRHQKIALSWMVQKERNGSSCSGGILADDQGL GKTVSTISLILTERSPVPSSAVKQEPCEAVTLDDDDEDDDAEPHLKKPALAHLADTCKPEATSS TIKTENPIANVKARPAAGTLVVCPTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTK YDVVLTTYSIVSMEVPKQSSPDSDDEEKGKPDRYGAPVGSSGSKKRKTSSSKKNKSGSTPESKL PEKPLAKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRY DPYAEYKKFCFMIKTPISRNPITGYKKLQVVLKTVMLRRTKDSGCDMFAEQSGLSEVKCEGTGP MLGNSEQEGNHFTSVPMFDHSAVIPDIPYTELNIGDVPGSMQNGNGSCLTVQGEYLQGEYQEYP QPDYGSFDMANEIVLHDLPQNNQSYELEQLPQNICESSSMQVGSPDQYCDDTSLSDYYMDDVSS IESMSSEQNRSEDICFRSESSTDSSPVPSSRNSTTEDADKYFGDAPKHLQNSMFPVSTQHQHSF MNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRDSDLCILEGSRSLASGHVLPPQGL QHNFQQSVCANPNLPRFGGRYRPHEERMTLRLALQDISQPKSEANPPDGVLAVPLLRHQKIALS WMVQKERNGSSCSGGILADDQGLGKTVSTISLILTERSPVPSSAVKQEPCEAVTLDDDDEDDDA EPHLKKPALAHLADTCKPEATSSTIKTENPIANVKARPAAGTLVVCPTSVLRQWADELRNKVTS KANLTFLVYHGSNRTKDPNDLTKYDVVLTTYSIVSMEVPKQSSPDSDDEEKGKPDRYGAPVGSS GSKKRKTSSSKKNKSGSTPESKLPEKPLAKVAWFRVILDEAQSIKNYRTQVARACWGLRAKRRW CLSGTPIQNAVEDLYSYFRFLRYDPYAEYKKFCFMIKTPISRNPITGYKKLQVVLKTVMLRRTK DSGCDMFAEQSGLSEVKCEGTGPMLGNSEQEGNHFTSVPMFDHSAVIPDIPYTELNIGDVPGSM QNGNGSCLTVQGEYLQGEYQEYPQPDYGSFDMANEIVLHDLPQNNQSYELEQLPQNICESSSMQ VGSPDQYCDDTSLSDYYMDDVSSIESMSSEQNRSEDICFRSESSTDSSPVPSSRNSTTEDADKY FGDAPKHLQNSMFPVSTQHQHSFMNSSDPMHPTFHKKYDIPRNGSSSILGNSSRNCFSLDSNRD SDLCILEGSRSLASGHVLPPQGLQHNFQQSVCANPNLPRFGGRYRPHEERMTLRLALQDISQPK SEANPPDGVLAVPLLRHQKIALSWMVQKERNGSSCSGGILADDQGLGKTVSTISLILTERSPVP SSAVKQEPCEAVTLDDDDEDDDAEPHLKKPALAHLADTCKPEATSSTIKTENPIANVKARPAAG TLVVCPTSVLRQWADELRNKVTSKANLTFLVYHGSNRTKDPNDLTKYDVVLTTYSIVSMEVPKQ SSPDSDDEEKGKPDRYGAPVGSSGSKKRKTSSSKKNKSGSTPESKLPEKPLAKVAWFRVILDEA QSIKNYRTQVARACWGLRAKRRWCLSGTPIQNAVEDLYSYFRFLRYDPYAEYKKFCFMIKTPIS RNPITGYKKLQVVLKTVMLRRTK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os01g0779400_circ_g.6

Address

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