Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT3G07760_circ_g.1 |
ID in PlantcircBase | ath_circ_020360 |
Alias | 3:2477541-2477733 |
Organism | Arabidpsis thaliana |
Position | chr3: 2477541-2477733 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT3G07760 |
Parent gene annotation |
Sterile alpha motif (SAM) domain-containing protein |
Parent gene strand | + |
Alternative splicing | AT3G07760_circ_g.2 |
Support reads | 1/1 |
Tissues | root;flower |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT3G07760.6:1 AT3G07760.3:1 AT3G07760.4:1 AT3G07760.10:1 AT3G07760.9:1 AT3G07760.1:1 AT3G07760.7:1 AT3G07760.8:1 AT3G07760.2:1 AT3G07760.5:1 AT3G07760.11:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.669761374 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Philips et al., 2020 |