Plant Circular RNA Database

Detail information of Csa4G010420_circ_g.1

			
						 General Information
					
						CircRNA Name
						Csa4G010420_circ_g.1
					
						ID in PlantcircBase
						csa_circ_002295
					
						Alias
						Chr4:1512671_1517133
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr4: 1512671-1517133  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa4G010420						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							NA						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa4G010420.1:5

General Information
CircRNA Name	Csa4G010420_circ_g.1
ID in PlantcircBase	csa_circ_002295
Alias	Chr4:1512671_1517133
Organism	Cucumis sativus
Position	chrChr4: 1512671-1517133 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa4G010420
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	NA
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa4G010420.1:5

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTTCATCCATCTGCAACGCAAAGCAACATCTCGTACAGTCTTATTTGGTAGTTGCATTGCAATC
TTTGCATACCGAATAACACTAGACTCTGCGGCATATtcgttcattattttgaggatgttgtccc
gcgtttggcagaagagactgatattatcttgtatctacataaaacaaaatgttattagttcaaa
attatgtt

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							TCGTTCATTATTTTGAGGATGTTGTCCCGCGTTTGGCAGAAGAGACTGATATTATCTTGTATCT
ACATAAAACAAAATGTTATTAGTTCAAAATTATGTTGTCCACTCTTATAAAAGAACATTAGGTT
GCCTGGCAAGAAATCATTAAAAAAACAGTACACCTCAATTGCCATTCTTAAATAATGAAATATT
TCATGTTTTTAGTTTTAGAACGAATGTGTTTGAATGGACAGTTGTATATCATGTTACATATATA
TACATAGAAACACAGACATGAAAGGCTTGGTAAAATGCAATTAAGTGATTTAAAGAGGGAGGGG
GCAAATAGCAAAGAAGAAGAGAATCAGTGCTCGCTCACAGATTATAATAAGCATCAGTAGGCCA
CATAATTTCACCATCGAGCATTTTTGAATAAGAAAACATTTTTTTACTGAAACCAAGGGAACAC
AGGGGACATGAGGAGTCTGCCAACAAATCAAAGGGACCAGCAAGAGTTTCATTCCTAACTGCTA
AGCAAATCTTTTGGGGGGTTGAGAAATACAAAAGAGTTTCACAGCAATTACACGATGGAAGTAA
AAGTTAAAAAGAAGTCTATAGAGTGATTCATAACCAACAGAAAGTGCAAATCTTGCTGTCCAGT
ACAGAAGTTAATATATCAGAGAAGGCTGAAAGAAAAATTACTCAGTATCATCAAGAAATAGATA
CAAATCCACAATTAACACTACGTGAGGTATGGTGGGACTAAATTTTTGCTTTAACTTAAAAAAT
TTTGCTTCAACTTAAAAATGCTAAAACAATATCCAGACAACCAAGTACTTCACCTGAAAAGATG
CAAGATTAGAAGAAATTTGATTCATTGCATGTGCATTCTGTTCAAGAAGCTCTCCAGTTGTACC
ACCAATAGCTGAAAGCATCACAAAGACCAAATGCAAATGTTATGCACAAAATACAGTAGTTTCA
AAAGAAAAGATATATATACACACACAACTATCGTTGAGAAAAAATGAAAGAATACACGGCATAC
AAAAAACAAAACCCACAAAAGGCAGTGTGCCAGCCTCAACTAGAAAGGGGCTCTAGCTAAACAA
AATGGTGCCCATATAATTATTGCAAACGATCTTCAACGGAAGCGCATAAAGAAACATGAAATGG
TGCCTATAGAATAATTATAGAAGATTTTTGAAATTGAAGTGCAGGCACACACACTAATAACCAC
TTACATCAAAAAATGAAAGAATGCAAGAATTTTAGAAAAGACAAAATGGTGCCTAAAGAATAAT
TGCAAATGATCTTCCAAATGGAAGAAATAAAGACACATGAAATTAATGAAAGATAAAAAATTAT
TAGGATCCCTCTCCAACCCTCTAAACGACTTTGTTGTTCCACTCATCCCAAAGATCCCATAAAT
CACACACCCCAAATAGGCCCTTTTAGTGAAAGGGCAGATGGAGGAGGAACTTCCAAATCATATC
ACTAGTGTCCTCCCCCAAGCAAGCAAAAACCAAGAAATGATTTTGCAGCCACGTCACAAACTTG
TATGTCCAAAGAATGTGGTCAACACTTCCTATGCCTTCGAACAGAGAATACAATAAAACGGGCC
AGCTATGAGGGCATCTTCCTTACAAGTGGATCCATAGTGTTAGCTCTTCCATGTAGAATTTTTT
AGGCAAAGAATTTCATTTTCTCGGAATCTTAATCCTCCAACAAAGCAGACTATCAAAATAAAGT
GAAGCCATCAGAGTTTCCCCAAGCCCTAAAGCAAACTTCATCCAGCCATAACTCTTCCCATCCC
AGCCTTTCACGCTCCTCCAGCACTCTACACCAATCTGCTAATGAGAAGAAAAACTCAATTAATC
TAAGAAAAGGAGGCACATTTAAAACTGTAACCCAGCCCCCAGTGAACTCTATCCTTCTTCCTTC
CCACCAATTGGAAACTCCATGGCTGCACTTGATAATCTTCTTGCTCAAGCTCCGAACCTCTACT
TATCCTGCAAATCAGCCTTTCTTCCATAAATGCACACTGTAAGATTCGCACAAAAAGGCCTAAA
AAACAAACTGAAATTTGACTTTCTATTCTATCAAATTCATAAAGAAATCCCAACTCAACCTGCT
CCTGAGTACTTCCACAGTAACCGTCATTTCTCAATCAAAACCAATTTTGCAATCCCAGTCCGAA
ACCATTTCCTCACCTTTCCAACTTTTTTATCTTCCTCAACCCATCTTTTTCCACCACCCCTCCT
CAAAGCCTGAGAATAATCCATCAGGCCCCTTGGCACCTCATGGTCTTTGATCATTTTAAGTCTT
CCACTGGGTTGTGCTAAACTGATTGGTTCCTAATCCTAGAATAATACAGGGCCTTCAAAAGACA
AGCAAACATTATGATAAGCATTTATACCTTCATAACATATTGACATGGTACAAATTTTAGAGGA
AAAAAAAGCATCTCGGATGGTTTAAACTGGAGACAAGCATGGCAGTTGAATACACCCTACAATT
TATTACCTGCATGTCCGATATTTTATTTTTATGAACGTTACCTAATGTATATTAATAGCGAATC
ATTAAATTTACTCCCCCATTTTTCACATCAAGAGAATGAAGAATGAAAGCTGTAACAGCCCAAA
ACACGTAATGGTGTAAACGAAGAATGTAGAAACAAAACCTTTATATGAGACACCATCATCATTG
TCCATAGGAATCATAGGCATTCCATAAGGAGGCACGTTAGGCCTTGCTGCAACCTGTGCTGACT
TCATTGAAGAGTCAGATACTCTTTCCTGAAATAAAGAAAAATATCATTCCCCAGTCCTAAGACC
ATGCCAAAAATTATGTCAAGACTTTCCATGGAAGAAATGGACAACTTTCCATACAACTTACTAT
TTATTGTACCAATTTACACTCTACTTCAAATTTTGTTTGGAGAATACAGTGTGAGATTTAAAAT
TATTTCAATTAAACTCCGAATTGTTGTAGGTGAATCAATTTAAACCCTTTATCAATATTACCTT
CGAAAAACGCCATTTCGTCAATTCCTACACACGTGTGGACTTCAAATGTCAAGTTAACAAAATG
GGCAATCAAAATTGATGCATGGATGGGACGACTTTCCAAAAAAAGCATCTTGAGAGCCCATATT
GATTTGCTTATGAAATTTAAAGCTTTAATTGGAAAATTGCAAGTCTGACCCAATGTTTGTTTCT
TTTTCTTTTTCTTTTTTTTTAAAGTTAACTTTCATTACCAAAAGGAAAATATAAGTCTCACCTA
ATGTTTATGCAAACAAAACAATAATGGAGAAGAAGAAAAACCATTCAATTAAAGTTTCCAAAAT
GGTTAGTTGTTTACAAAATGAATGTCTAAAGTTGATGCATATGCTGCAAGTAACAAATAAACAA
TTGAACAATAAAAAGAAAACTAAGAAGTGAACCAAAGAGAAGCAGGGAGACCATAAAATGCACC
AATAATTTACACAATACCTTTAATACCTTTTTATCTTTGTTCTTTCTTGTTAAATTGTGTTCTT
CCTTCCTTCTCTTGCTATTTTCCTTTTTCTGACCCCCAAAGAAAAAAAAGTAAACCAAAGAGGA
ACATTAAGTGCATAAATAAAATTAAAACCTGAAAACGATGATATAAAAGTATAAAAAATGTCCA
TAAACGATGATAGAGTGCCTTTATGCCATATCCAAATACAGACTAATAAACCACATGAAAAAAG
TGATTTAAAAAAATGTTTTAATGGGTAAGCACTTGCTAACTGCTAGTATCAGGAAGAAAAATTA
TTCTTTTCCTTTGGGTTATAGAAACAGAACAATCACGATTACAAAATGCATTGACATTCAGACC
ATTTAAAGGCATGCATTAGAATACAAATATATGTACATATGTACATCTGTAGGTATGTATAAAT
GCACTTAAATCTACTTTTCTTTTGTTTTGAAAATGAAACGAGCCTCTTCGTTAATATAATGAAA
TGGAAACAAGAACTTCATGGAGCATCAATCACAAAATTGTGCCACTCTTATATGGATATTTCTT
TACGAAGGAGGTGTTTGGAGATTGGAATGTAATCAGAATCATTGGAATCAAAGGAGTGTTGGAA
AGCACAAGTAATCGAAGACGAAACGGAAATGAGATCGTATAGCGCAAAAACAGTAAGAAATAGA
GTTAATATTAAAAACTATCAGAATGGAATGAGTTTCGTATTACAAATCGTACCAAAACACATCC
CATGGCTAACCAGACACCCCTTAATAGTATTTCTGTCCAATTACCATGCTAATGGTATGCATGA
TTGCAAGTTAAGTAGCAGGAAACTTATCAAAAATTTATACGATAATAGAAGCAAGAATTGAGGA
AAATAACTCACGTTCATCCATCTGCAACGCAAAGCAACATCTCGTACAGTCTTATTTGGTAGTT
GCATTGCAATCTTTGCATACCGAATAACACTAGACTCTGCGGCATAT
						
					

			
		

Sequences
Splice junction sequence	GTTCATCCATCTGCAACGCAAAGCAACATCTCGTACAGTCTTATTTGGTAGTTGCATTGCAATC TTTGCATACCGAATAACACTAGACTCTGCGGCATATtcgttcattattttgaggatgttgtccc gcgtttggcagaagagactgatattatcttgtatctacataaaacaaaatgttattagttcaaa attatgtt
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	TCGTTCATTATTTTGAGGATGTTGTCCCGCGTTTGGCAGAAGAGACTGATATTATCTTGTATCT ACATAAAACAAAATGTTATTAGTTCAAAATTATGTTGTCCACTCTTATAAAAGAACATTAGGTT GCCTGGCAAGAAATCATTAAAAAAACAGTACACCTCAATTGCCATTCTTAAATAATGAAATATT TCATGTTTTTAGTTTTAGAACGAATGTGTTTGAATGGACAGTTGTATATCATGTTACATATATA TACATAGAAACACAGACATGAAAGGCTTGGTAAAATGCAATTAAGTGATTTAAAGAGGGAGGGG GCAAATAGCAAAGAAGAAGAGAATCAGTGCTCGCTCACAGATTATAATAAGCATCAGTAGGCCA CATAATTTCACCATCGAGCATTTTTGAATAAGAAAACATTTTTTTACTGAAACCAAGGGAACAC AGGGGACATGAGGAGTCTGCCAACAAATCAAAGGGACCAGCAAGAGTTTCATTCCTAACTGCTA AGCAAATCTTTTGGGGGGTTGAGAAATACAAAAGAGTTTCACAGCAATTACACGATGGAAGTAA AAGTTAAAAAGAAGTCTATAGAGTGATTCATAACCAACAGAAAGTGCAAATCTTGCTGTCCAGT ACAGAAGTTAATATATCAGAGAAGGCTGAAAGAAAAATTACTCAGTATCATCAAGAAATAGATA CAAATCCACAATTAACACTACGTGAGGTATGGTGGGACTAAATTTTTGCTTTAACTTAAAAAAT TTTGCTTCAACTTAAAAATGCTAAAACAATATCCAGACAACCAAGTACTTCACCTGAAAAGATG CAAGATTAGAAGAAATTTGATTCATTGCATGTGCATTCTGTTCAAGAAGCTCTCCAGTTGTACC ACCAATAGCTGAAAGCATCACAAAGACCAAATGCAAATGTTATGCACAAAATACAGTAGTTTCA AAAGAAAAGATATATATACACACACAACTATCGTTGAGAAAAAATGAAAGAATACACGGCATAC AAAAAACAAAACCCACAAAAGGCAGTGTGCCAGCCTCAACTAGAAAGGGGCTCTAGCTAAACAA AATGGTGCCCATATAATTATTGCAAACGATCTTCAACGGAAGCGCATAAAGAAACATGAAATGG TGCCTATAGAATAATTATAGAAGATTTTTGAAATTGAAGTGCAGGCACACACACTAATAACCAC TTACATCAAAAAATGAAAGAATGCAAGAATTTTAGAAAAGACAAAATGGTGCCTAAAGAATAAT TGCAAATGATCTTCCAAATGGAAGAAATAAAGACACATGAAATTAATGAAAGATAAAAAATTAT TAGGATCCCTCTCCAACCCTCTAAACGACTTTGTTGTTCCACTCATCCCAAAGATCCCATAAAT CACACACCCCAAATAGGCCCTTTTAGTGAAAGGGCAGATGGAGGAGGAACTTCCAAATCATATC ACTAGTGTCCTCCCCCAAGCAAGCAAAAACCAAGAAATGATTTTGCAGCCACGTCACAAACTTG TATGTCCAAAGAATGTGGTCAACACTTCCTATGCCTTCGAACAGAGAATACAATAAAACGGGCC AGCTATGAGGGCATCTTCCTTACAAGTGGATCCATAGTGTTAGCTCTTCCATGTAGAATTTTTT AGGCAAAGAATTTCATTTTCTCGGAATCTTAATCCTCCAACAAAGCAGACTATCAAAATAAAGT GAAGCCATCAGAGTTTCCCCAAGCCCTAAAGCAAACTTCATCCAGCCATAACTCTTCCCATCCC AGCCTTTCACGCTCCTCCAGCACTCTACACCAATCTGCTAATGAGAAGAAAAACTCAATTAATC TAAGAAAAGGAGGCACATTTAAAACTGTAACCCAGCCCCCAGTGAACTCTATCCTTCTTCCTTC CCACCAATTGGAAACTCCATGGCTGCACTTGATAATCTTCTTGCTCAAGCTCCGAACCTCTACT TATCCTGCAAATCAGCCTTTCTTCCATAAATGCACACTGTAAGATTCGCACAAAAAGGCCTAAA AAACAAACTGAAATTTGACTTTCTATTCTATCAAATTCATAAAGAAATCCCAACTCAACCTGCT CCTGAGTACTTCCACAGTAACCGTCATTTCTCAATCAAAACCAATTTTGCAATCCCAGTCCGAA ACCATTTCCTCACCTTTCCAACTTTTTTATCTTCCTCAACCCATCTTTTTCCACCACCCCTCCT CAAAGCCTGAGAATAATCCATCAGGCCCCTTGGCACCTCATGGTCTTTGATCATTTTAAGTCTT CCACTGGGTTGTGCTAAACTGATTGGTTCCTAATCCTAGAATAATACAGGGCCTTCAAAAGACA AGCAAACATTATGATAAGCATTTATACCTTCATAACATATTGACATGGTACAAATTTTAGAGGA AAAAAAAGCATCTCGGATGGTTTAAACTGGAGACAAGCATGGCAGTTGAATACACCCTACAATT TATTACCTGCATGTCCGATATTTTATTTTTATGAACGTTACCTAATGTATATTAATAGCGAATC ATTAAATTTACTCCCCCATTTTTCACATCAAGAGAATGAAGAATGAAAGCTGTAACAGCCCAAA ACACGTAATGGTGTAAACGAAGAATGTAGAAACAAAACCTTTATATGAGACACCATCATCATTG TCCATAGGAATCATAGGCATTCCATAAGGAGGCACGTTAGGCCTTGCTGCAACCTGTGCTGACT TCATTGAAGAGTCAGATACTCTTTCCTGAAATAAAGAAAAATATCATTCCCCAGTCCTAAGACC ATGCCAAAAATTATGTCAAGACTTTCCATGGAAGAAATGGACAACTTTCCATACAACTTACTAT TTATTGTACCAATTTACACTCTACTTCAAATTTTGTTTGGAGAATACAGTGTGAGATTTAAAAT TATTTCAATTAAACTCCGAATTGTTGTAGGTGAATCAATTTAAACCCTTTATCAATATTACCTT CGAAAAACGCCATTTCGTCAATTCCTACACACGTGTGGACTTCAAATGTCAAGTTAACAAAATG GGCAATCAAAATTGATGCATGGATGGGACGACTTTCCAAAAAAAGCATCTTGAGAGCCCATATT GATTTGCTTATGAAATTTAAAGCTTTAATTGGAAAATTGCAAGTCTGACCCAATGTTTGTTTCT TTTTCTTTTTCTTTTTTTTTAAAGTTAACTTTCATTACCAAAAGGAAAATATAAGTCTCACCTA ATGTTTATGCAAACAAAACAATAATGGAGAAGAAGAAAAACCATTCAATTAAAGTTTCCAAAAT GGTTAGTTGTTTACAAAATGAATGTCTAAAGTTGATGCATATGCTGCAAGTAACAAATAAACAA TTGAACAATAAAAAGAAAACTAAGAAGTGAACCAAAGAGAAGCAGGGAGACCATAAAATGCACC AATAATTTACACAATACCTTTAATACCTTTTTATCTTTGTTCTTTCTTGTTAAATTGTGTTCTT CCTTCCTTCTCTTGCTATTTTCCTTTTTCTGACCCCCAAAGAAAAAAAAGTAAACCAAAGAGGA ACATTAAGTGCATAAATAAAATTAAAACCTGAAAACGATGATATAAAAGTATAAAAAATGTCCA TAAACGATGATAGAGTGCCTTTATGCCATATCCAAATACAGACTAATAAACCACATGAAAAAAG TGATTTAAAAAAATGTTTTAATGGGTAAGCACTTGCTAACTGCTAGTATCAGGAAGAAAAATTA TTCTTTTCCTTTGGGTTATAGAAACAGAACAATCACGATTACAAAATGCATTGACATTCAGACC ATTTAAAGGCATGCATTAGAATACAAATATATGTACATATGTACATCTGTAGGTATGTATAAAT GCACTTAAATCTACTTTTCTTTTGTTTTGAAAATGAAACGAGCCTCTTCGTTAATATAATGAAA TGGAAACAAGAACTTCATGGAGCATCAATCACAAAATTGTGCCACTCTTATATGGATATTTCTT TACGAAGGAGGTGTTTGGAGATTGGAATGTAATCAGAATCATTGGAATCAAAGGAGTGTTGGAA AGCACAAGTAATCGAAGACGAAACGGAAATGAGATCGTATAGCGCAAAAACAGTAAGAAATAGA GTTAATATTAAAAACTATCAGAATGGAATGAGTTTCGTATTACAAATCGTACCAAAACACATCC CATGGCTAACCAGACACCCCTTAATAGTATTTCTGTCCAATTACCATGCTAATGGTATGCATGA TTGCAAGTTAAGTAGCAGGAAACTTATCAAAAATTTATACGATAATAGAAGCAAGAATTGAGGA AAATAACTCACGTTCATCCATCTGCAACGCAAAGCAACATCTCGTACAGTCTTATTTGGTAGTT GCATTGCAATCTTTGCATACCGAATAACACTAGACTCTGCGGCATAT

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.092068605

Conservation Information
Conserved circRNAs	NA
PMCS	0.092068605

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							1517092-1512673(-)
						
						Potential amino acid sequence
						
							MQLPNKTVRDVALRCRWMNKKENSKRRKEEHNLTRKNKDKKERVSDSSMKSAQVAARPNVPPYG
MPMIPMDNDDGVSYKAIGGTTGELLEQNAHAMNQISSNLASFQIQDNISLFCQTRDNILKIMNE
YAAESSVIRYAKIAMQLPNKTVRDVALRCRWMNKKENSKRRKEEHNLTRKNKDKKERVSDSSMK
SAQVAARPNVPPYGMPMIPMDNDDGVSYKAIGGTTGELLEQNAHAMNQISSNLASFQIQDNISL
FCQTRDNILKIMNEYAAESSVIRYAKIAMQLPNKTVRDVALRCRWMNKKENSKRRKEEHNLTRK
NKDKKERVSDSSMKSAQVAARPNVPPYGMPMIPMDNDDGVSYKAIGGTTGELLEQNAHAMNQIS
SNLASFQIQDNISLFCQTRDNILKIMNEYAAESSVIRYAKIAMQLPNKTVRDVALRCRWMNKKE
NSKRRKEEHNLTRKNKDKKERVSDSSMKSAQVAARPNVPPYGMPMIPMDNDDGVSYKAIGGTTG
ELLEQNAHAMNQISSNLASFQIQDNISLFCQTRDNILKIMN
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to salt stress in root

Functional Information
Coding potential	Y
Potential coding position	1517092-1512673(-)
Potential amino acid sequence	MQLPNKTVRDVALRCRWMNKKENSKRRKEEHNLTRKNKDKKERVSDSSMKSAQVAARPNVPPYG MPMIPMDNDDGVSYKAIGGTTGELLEQNAHAMNQISSNLASFQIQDNISLFCQTRDNILKIMNE YAAESSVIRYAKIAMQLPNKTVRDVALRCRWMNKKENSKRRKEEHNLTRKNKDKKERVSDSSMK SAQVAARPNVPPYGMPMIPMDNDDGVSYKAIGGTTGELLEQNAHAMNQISSNLASFQIQDNISL FCQTRDNILKIMNEYAAESSVIRYAKIAMQLPNKTVRDVALRCRWMNKKENSKRRKEEHNLTRK NKDKKERVSDSSMKSAQVAARPNVPPYGMPMIPMDNDDGVSYKAIGGTTGELLEQNAHAMNQIS SNLASFQIQDNISLFCQTRDNILKIMNEYAAESSVIRYAKIAMQLPNKTVRDVALRCRWMNKKE NSKRRKEEHNLTRKNKDKKERVSDSSMKSAQVAARPNVPPYGMPMIPMDNDDGVSYKAIGGTTG ELLEQNAHAMNQISSNLASFQIQDNISLFCQTRDNILKIMN
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to salt stress in root

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa4G010420_circ_g.1

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