Plant Circular RNA Database

Detail information of Os01g0617500_circ_g.5

			
						 General Information
					
						CircRNA Name
						Os01g0617500_circ_g.5
					
						ID in PlantcircBase
						osa_circ_002647
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr1: 24539898-24544107  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os01g0617500						
					
						Parent gene annotation
						
							Tetratricopeptide-like helical domain containing protein. (Os01t
0617500-01);Similar to predicted protein. (Os01t0617500-02)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os01g0617500_circ_g.1 Os01g0617500_circ_g.2 Os01g0617500_circ_g.3 Os01g0617500_circ_g.4 Os01g0617500_circ_g.6 Os01g0617500_circ_g.7 Os01g0617500_circ_g.8 Os01g0617500_circ_g.9 Os01g0617500_circ_g.10 Os01g0617500_circ_g.11 Os01g0617500_circ_g.12 						
					
						Support reads
						1
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os01t0617500-01:10

General Information
CircRNA Name	Os01g0617500_circ_g.5
ID in PlantcircBase	osa_circ_002647
Alias	NA
Organism	Oryza sativa
Position	chr1: 24539898-24544107 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os01g0617500
Parent gene annotation	Tetratricopeptide-like helical domain containing protein. (Os01t 0617500-01);Similar to predicted protein. (Os01t0617500-02)
Parent gene strand	-
Alternative splicing	Os01g0617500_circ_g.1 Os01g0617500_circ_g.2 Os01g0617500_circ_g.3 Os01g0617500_circ_g.4 Os01g0617500_circ_g.6 Os01g0617500_circ_g.7 Os01g0617500_circ_g.8 Os01g0617500_circ_g.9 Os01g0617500_circ_g.10 Os01g0617500_circ_g.11 Os01g0617500_circ_g.12
Support reads	1
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os01t0617500-01:10

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAGAAGCATTTCACTGTGTTCATATCGCTCATTCTCTGGGGGATAATCATCTTCCAGTGTCCCC
TCATATGCCTCCAATACTTCTATTGCCTTGGAAGAActggtcagcttggagcatctgcataaca
cactcgctgtttaaataacgatcagcgagatccattgacctagcttcatccgccaatgctgcag
ccgctgag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 910
Transcript exons: 24539898-24540026,24540393-24540488,24540608-24540662,24
541205-24541275,24541361-24541414,24541580-24541657,2454
1874-24542006,24543270-24543385,24543469-24543540,245440
02-24544107
CTGGTCAGCTTGGAGCATCTGCATAACACACTCGCTGTTTAAATAACGATCAGCGAGATCCATT
GACCTAGCTTCATCCGCCAATGCTGCAGCCGCTGAGAAATTGCCAGCATGCTGCAATATCTTCC
CCTTTATTGAGTATAAATCAATTACAGTTGGCGTGTGTGAAATAGCCTCATCAATTTTATCTAG
AGCAATATCATACTGGCCTCTTCTGTCATAGTGCTGAGAGATCAAAAACAGAGTCCACAGGAGT
GTGGATGGAGGTTCCGTATGCGAACTTCCTGGGAAGCATCCTGAAGTCCTAATTGAACGTTCTA
GCTTAAGAAACAATTCCTCCAATATGTTTGCCTTGCCAGGTTGCTCGTACAATGGGCTAAGATC
AGAAAATAGTGATGGTACTCCCTTGGTTAATAGGGGTCTGACATAATTATCTGCTGCCTCCTGA
AATTTCTCTCCTTCCAGGAAATCAAGGGGTATGCGCTTAACAGCAGATGACCAACCATATTCTT
CTTTAAGTGAGCTATACAATTCGCATAATCGGTCAACATCATCAGTGGAATACTGACCATTCTC
TGAGTATAGACCAAGGCACTTTTGAACAGCTATGAAATACTTGTAGTTATCAGGATTCATGAAA
AGCAGGGACCTATATGTTTTCTCAGCCTCCTCAAAGCGGCCAAGTTTCAACAAAATGCAGGCCA
TTTGTTCTTTGAACGATAGCTTGTCAACAATTTTGCTCTCCTTCTTCTGCATCTCCTCAAGAGC
TCTGTCCAGCATCCCACATTCCTCGAACAATGAAATCTTATACAGAAGCATTTCACTGTGTTCA
TATCGCTCATTCTCTGGGGGATAATCATCTTCCAGTGTCCCCTCATATGCCTCCAATACTTCTA
TTGCCTTGGAAGAA
						
					

						Genomic sequence
						
							CTGGTCAGCTTGGAGCATCTGCATAACACACTCGCTGTTTAAATAACGATCAGCGAGATCCATT
GACCTAGCTTCATCCGCCAATGCTGCAGCCGCTGAGAAATTGCCAGCATGCTGCAATATCTTCC
CCTAAAGTAACAGCATGCACAATAGCAATTGAATTAAGATAAAATTGTATGGATAATAGTATAG
CATAAATTAACATAATGTGAAATGAAATAAAACAACAATTAATAAACCATCCTGAAGCTAGTAA
GTACATTTAGATAAGGTAAAACAAAAGTATATGGATGGAAATGAAGAGGAAAGAGATGCTATGA
GTAACATCATGGTAATGAAACCATAGAATTGAAATTAAGATTATTATGGCTTCATGCAACCGCA
AAGAAAATACACAGACAACAATATGTTAGACAAACTGCCAATACAAACATATATAAGGGGAAAC
TCAGGTAGTGTGATGCAGGAGGGTGTGAAGAAGGAATAGGGAGAAACCTTTATTGAGTATAAAT
CAATTACAGTTGGCGTGTGTGAAATAGCCTCATCAATTTTATCTAGAGCAATATCATACTGGCC
TCTTCTGTCATAGTGCTGCATCATTCAACATGTGAAAAAAATTGACCATGTGAATTCAAAAGAT
AAAAAATAAAAGCAATTAAGGAATTCTAAAATTTTAGCTTGCAAGGAAACACGAAGTGCTCAAT
GCTAACCTGAGAGATCAAAAACAGAGTCCACAGGAGTGTGGATGGAGGTTCCGTATGCGAACTG
CATGAAGAAACAATTCGATCAACTCCATACCAACATTTGCAGATTAAAAGGAGTACAGTAAGTT
TCATGCAAAATTACTAGGCTAATTACAAGATAAAGAAACAGCTAATACTAATAACTCTATTACT
AAAAACATAGCTATGACTAATCAAATCATTATTTTACAGTTTGGCATGTTTACACATGACACCT
TTGGATAGGAAATCGCTTACACAGGAATTTCAACAATAATCTTTTCATACATTAGAAATACTCT
GCTAATAAATCCATATTATTATCTTCAAGAATATTATGGCTAAAAGTATTTCACGCACGTTGAA
TTGGAAAGTTACAAAAACAGACAGGGTAGTAGAAGTGCAATGCATTCTAAACTTCTTTTCAAAA
TAAAAATTTACATTTATTGTCAAAACAGTCAGGGAATCTGGTTCAACACACAGTTTTTGCCCAA
AAAGATGCCAGAATTAATCAAAATTACAGTTTGAACAAGAAAAAACAACAGTAAGGATGGATGG
TGCATATGGAATGACGGCCAGGCATACCTTCCTGGGAAGCATCCTGAAGTCCTAATTGAACGTT
CTAGCTTAAGAAACAATTCCTCCAATATGTTTGCCTGTCAACAGGATTCATAACTGTCACACTA
CGAACAGAGAAAAATAAGCACAAAAAATGATTTTGAGTAGCATAACTGCTATTACCTTGCCAGG
TTGCTCGTACAATGGGCTAAGATCAGAAAATAGTGATGGTACTCCCTAAAAATATGAGACATGT
TAATCAATTGCAACAAAGAGAAACAGTATGCTGCCTGGCAAATTGTAAAAGGATATAAGGCTGT
ACAGTAAAGAGAAACAAATGATTACCATAAACGAGACACCTTTTAGAAACTAAAAGTATTTCCT
AAAAGTTGCTAAATTTACCTTGGTTAATAGGGGTCTGACATAATTATCTGCTGCCTCCTGAAAT
TTCTCTCCTTCCAGGAAATCAAGGGGTATGCGCTGTTGCAATTAGAGACAATTTTAGATTCACA
GCTTCTACAGTGCATGCCCCACTTACCATATATATGGATAGACAACTTGGAATTCAGAAAATTA
GTGTTGCAATATAAAACAAATAAATACTACCAATATCAAGATACTGACGTGTGTCCGGAGAGCT
CAACAATTTAACATCAAGGAACAAAGAAAAAATAAAAACAATTTGAGGTGGTTTACCTTAACAG
CAGATGACCAACCATATTCTTCTTTAAGTGAGCTATACAATTCGCATAATCGGTCAACATCATC
AGTGGAATACTGACCATTCTCTGAGTATAGACCAAGGCACTTTTGAACAGCTATGAAATACCTG
ATTAAAACCAGTGAAAATAAATTAATCCCTAGAGTATTAACAAGAAGGGGTACAATGTAAGTCA
GAAGAGTGCTATAGACGCAAGTATCTATAATATTTCCCCTGAATACAAGGGAATTCCAAAATTG
AGTTGATATTAAGTCATAGAGGAAGATTGTAGCAGCAAAGATGCATCAAACTTATCCTAACACT
TAGCCTTACAGCGTCACTCCACCTAAAGGATGAGCCCAGTTGGCATGGATGGTTCCGCAAGTTT
TATATGCAACTATCTAGTGGGACTAAGCCAACCAATAAGAGCAGGCACATGGATGCCTATTGTT
GTGACCTTGAGTTTGCGAAACCATATAAGCACCTGTAAGGTACTTGCACTGAAAGTTTGGACTC
TTAGATGGATGCTTTGCTGACATGGTATACTAAGCACCTCCCTTCTTTGCCACTTCTTCCATTG
TACAAGTCTTAGCAGACAGAAAATTGGTTCATATCGGGCCACATATTTCTGATACCATGTTGCA
TACCAGGTAAATTCTGCAAAACCAGAGGCTCTCATCCTCACTTATCTTAAAAGGGCAAGCCAAG
TTGGTAAGCATGATTTTCCCATTGTTTATATGGGACTATTGGGTTTAAACCCACCACCCACCAC
GTACCAACTAGAACTAAGAACCCTCCCACAGGCTAAATTTGCACCATCATGTTACAGAAATATA
AATGGTATAGCTCCCCTGTCCTCCTATGAAGAGCATGTGATATACATATATCAAGCAAAGAGAG
CACAAACACAAGAAATAACTTAAATCAATTCCATGCAAAGTTTTGCAACATGAACATTAAATAC
GTTAAGGACTGAAGGGTCAGAATCAGTCATGATAACATATGATTTCTGCCTCATGTATAGTTCA
TGTGGTTGCAGACCAGATTGTTGTCACGATTAACTACCAAATGCAAGTACTGATAAAATTGGTT
GAATTAGCCAAATTGACCAACACTTATTTATAAAATAGAGCTAGATTATCATATAACTCATAAA
CTGGGAGAGAGTATTTTACAGAAGATCCTAAAGCATGCATAATTACAAAATTAAAGATTTAAAA
ATAACAATAATCTAAAAATAAGGTATTAATTGGAATAAAAATGGAATGTAAACAGCATATTAGA
ATAAGTCCATGTTGAAATTCAAAACCCATACACACTATTTTCAGAGTTTACCAGAAGACGCAAA
GAAATTTAAGTGAGGAAAAAAAAAAAGCAGCACAGGTGCCTCACTTGTAGTTATCAGGATTCAT
GAAAAGCAGGGACCTATATGTTTTCTCAGCCTCCTCAAAGCGGCCAAGTTTCAACAAAATGCAG
GCCATTTGTTCTTTGAACGATAGCTTGTCAACCTAGAAGAAAAAAATAATTATGTGCGCCCATC
TTTCTGAGTAATATTTTTCCTCTTTACATGATTGAGAAAGATAAGACTTACAATTTTGCTCTCC
TTCTTCTGCATCTCCTCAAGAGCTCTGTCCAGCATCCCACATTCCTCGAACAATGAAATCTGTG
GAACAGCAATAACATTACATAACAAGTAAAGATGAAGTGAGTATTAAAATAACGCAAATTCTTT
CCACTTTCTAGTTTCCAGAGCATGAAAAGAACTTAATACATAAATAAAAGTGATGGCATAAAAT
CAGAACATAAGTAAAGAATCAATTTCATTCAGAAAGTTAGATTGTTTGAAGAAGAGATGGCCGG
CAGCAAGTTTTCAACTAATATGAACCAGAGAGTGAATATAAATCATCATTCGAACACTTCGTAT
TTACAGACAGCATTCTGCAAAACCAGCATCAAAATACAAAATACAACGCTACACAAATTACAGT
ATGACCAACGCATATAATCCAGACAGATATCATATATGTCCTGATAATTCGTTGTTCATGAAAG
TGTGAATGTGTATAAGTACAGCATTGCTACCGCAATCATATCCCAGAAATACAAGAGAATTTTG
ACAGGCACCTTATACAGAAGCATTTCACTGTGTTCATATCGCTCATTCTCTGGGGGATAATCAT
CTTCCAGTGTCCCCTCATATGCCTCCAATACTTCTATTGCCTTGGAAGAA
						
					

			
		

Sequences
Splice junction sequence	CAGAAGCATTTCACTGTGTTCATATCGCTCATTCTCTGGGGGATAATCATCTTCCAGTGTCCCC TCATATGCCTCCAATACTTCTATTGCCTTGGAAGAActggtcagcttggagcatctgcataaca cactcgctgtttaaataacgatcagcgagatccattgacctagcttcatccgccaatgctgcag ccgctgag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 910 Transcript exons: 24539898-24540026,24540393-24540488,24540608-24540662,24 541205-24541275,24541361-24541414,24541580-24541657,2454 1874-24542006,24543270-24543385,24543469-24543540,245440 02-24544107 CTGGTCAGCTTGGAGCATCTGCATAACACACTCGCTGTTTAAATAACGATCAGCGAGATCCATT GACCTAGCTTCATCCGCCAATGCTGCAGCCGCTGAGAAATTGCCAGCATGCTGCAATATCTTCC CCTTTATTGAGTATAAATCAATTACAGTTGGCGTGTGTGAAATAGCCTCATCAATTTTATCTAG AGCAATATCATACTGGCCTCTTCTGTCATAGTGCTGAGAGATCAAAAACAGAGTCCACAGGAGT GTGGATGGAGGTTCCGTATGCGAACTTCCTGGGAAGCATCCTGAAGTCCTAATTGAACGTTCTA GCTTAAGAAACAATTCCTCCAATATGTTTGCCTTGCCAGGTTGCTCGTACAATGGGCTAAGATC AGAAAATAGTGATGGTACTCCCTTGGTTAATAGGGGTCTGACATAATTATCTGCTGCCTCCTGA AATTTCTCTCCTTCCAGGAAATCAAGGGGTATGCGCTTAACAGCAGATGACCAACCATATTCTT CTTTAAGTGAGCTATACAATTCGCATAATCGGTCAACATCATCAGTGGAATACTGACCATTCTC TGAGTATAGACCAAGGCACTTTTGAACAGCTATGAAATACTTGTAGTTATCAGGATTCATGAAA AGCAGGGACCTATATGTTTTCTCAGCCTCCTCAAAGCGGCCAAGTTTCAACAAAATGCAGGCCA TTTGTTCTTTGAACGATAGCTTGTCAACAATTTTGCTCTCCTTCTTCTGCATCTCCTCAAGAGC TCTGTCCAGCATCCCACATTCCTCGAACAATGAAATCTTATACAGAAGCATTTCACTGTGTTCA TATCGCTCATTCTCTGGGGGATAATCATCTTCCAGTGTCCCCTCATATGCCTCCAATACTTCTA TTGCCTTGGAAGAA
Genomic sequence	CTGGTCAGCTTGGAGCATCTGCATAACACACTCGCTGTTTAAATAACGATCAGCGAGATCCATT GACCTAGCTTCATCCGCCAATGCTGCAGCCGCTGAGAAATTGCCAGCATGCTGCAATATCTTCC CCTAAAGTAACAGCATGCACAATAGCAATTGAATTAAGATAAAATTGTATGGATAATAGTATAG CATAAATTAACATAATGTGAAATGAAATAAAACAACAATTAATAAACCATCCTGAAGCTAGTAA GTACATTTAGATAAGGTAAAACAAAAGTATATGGATGGAAATGAAGAGGAAAGAGATGCTATGA GTAACATCATGGTAATGAAACCATAGAATTGAAATTAAGATTATTATGGCTTCATGCAACCGCA AAGAAAATACACAGACAACAATATGTTAGACAAACTGCCAATACAAACATATATAAGGGGAAAC TCAGGTAGTGTGATGCAGGAGGGTGTGAAGAAGGAATAGGGAGAAACCTTTATTGAGTATAAAT CAATTACAGTTGGCGTGTGTGAAATAGCCTCATCAATTTTATCTAGAGCAATATCATACTGGCC TCTTCTGTCATAGTGCTGCATCATTCAACATGTGAAAAAAATTGACCATGTGAATTCAAAAGAT AAAAAATAAAAGCAATTAAGGAATTCTAAAATTTTAGCTTGCAAGGAAACACGAAGTGCTCAAT GCTAACCTGAGAGATCAAAAACAGAGTCCACAGGAGTGTGGATGGAGGTTCCGTATGCGAACTG CATGAAGAAACAATTCGATCAACTCCATACCAACATTTGCAGATTAAAAGGAGTACAGTAAGTT TCATGCAAAATTACTAGGCTAATTACAAGATAAAGAAACAGCTAATACTAATAACTCTATTACT AAAAACATAGCTATGACTAATCAAATCATTATTTTACAGTTTGGCATGTTTACACATGACACCT TTGGATAGGAAATCGCTTACACAGGAATTTCAACAATAATCTTTTCATACATTAGAAATACTCT GCTAATAAATCCATATTATTATCTTCAAGAATATTATGGCTAAAAGTATTTCACGCACGTTGAA TTGGAAAGTTACAAAAACAGACAGGGTAGTAGAAGTGCAATGCATTCTAAACTTCTTTTCAAAA TAAAAATTTACATTTATTGTCAAAACAGTCAGGGAATCTGGTTCAACACACAGTTTTTGCCCAA AAAGATGCCAGAATTAATCAAAATTACAGTTTGAACAAGAAAAAACAACAGTAAGGATGGATGG TGCATATGGAATGACGGCCAGGCATACCTTCCTGGGAAGCATCCTGAAGTCCTAATTGAACGTT CTAGCTTAAGAAACAATTCCTCCAATATGTTTGCCTGTCAACAGGATTCATAACTGTCACACTA CGAACAGAGAAAAATAAGCACAAAAAATGATTTTGAGTAGCATAACTGCTATTACCTTGCCAGG TTGCTCGTACAATGGGCTAAGATCAGAAAATAGTGATGGTACTCCCTAAAAATATGAGACATGT TAATCAATTGCAACAAAGAGAAACAGTATGCTGCCTGGCAAATTGTAAAAGGATATAAGGCTGT ACAGTAAAGAGAAACAAATGATTACCATAAACGAGACACCTTTTAGAAACTAAAAGTATTTCCT AAAAGTTGCTAAATTTACCTTGGTTAATAGGGGTCTGACATAATTATCTGCTGCCTCCTGAAAT TTCTCTCCTTCCAGGAAATCAAGGGGTATGCGCTGTTGCAATTAGAGACAATTTTAGATTCACA GCTTCTACAGTGCATGCCCCACTTACCATATATATGGATAGACAACTTGGAATTCAGAAAATTA GTGTTGCAATATAAAACAAATAAATACTACCAATATCAAGATACTGACGTGTGTCCGGAGAGCT CAACAATTTAACATCAAGGAACAAAGAAAAAATAAAAACAATTTGAGGTGGTTTACCTTAACAG CAGATGACCAACCATATTCTTCTTTAAGTGAGCTATACAATTCGCATAATCGGTCAACATCATC AGTGGAATACTGACCATTCTCTGAGTATAGACCAAGGCACTTTTGAACAGCTATGAAATACCTG ATTAAAACCAGTGAAAATAAATTAATCCCTAGAGTATTAACAAGAAGGGGTACAATGTAAGTCA GAAGAGTGCTATAGACGCAAGTATCTATAATATTTCCCCTGAATACAAGGGAATTCCAAAATTG AGTTGATATTAAGTCATAGAGGAAGATTGTAGCAGCAAAGATGCATCAAACTTATCCTAACACT TAGCCTTACAGCGTCACTCCACCTAAAGGATGAGCCCAGTTGGCATGGATGGTTCCGCAAGTTT TATATGCAACTATCTAGTGGGACTAAGCCAACCAATAAGAGCAGGCACATGGATGCCTATTGTT GTGACCTTGAGTTTGCGAAACCATATAAGCACCTGTAAGGTACTTGCACTGAAAGTTTGGACTC TTAGATGGATGCTTTGCTGACATGGTATACTAAGCACCTCCCTTCTTTGCCACTTCTTCCATTG TACAAGTCTTAGCAGACAGAAAATTGGTTCATATCGGGCCACATATTTCTGATACCATGTTGCA TACCAGGTAAATTCTGCAAAACCAGAGGCTCTCATCCTCACTTATCTTAAAAGGGCAAGCCAAG TTGGTAAGCATGATTTTCCCATTGTTTATATGGGACTATTGGGTTTAAACCCACCACCCACCAC GTACCAACTAGAACTAAGAACCCTCCCACAGGCTAAATTTGCACCATCATGTTACAGAAATATA AATGGTATAGCTCCCCTGTCCTCCTATGAAGAGCATGTGATATACATATATCAAGCAAAGAGAG CACAAACACAAGAAATAACTTAAATCAATTCCATGCAAAGTTTTGCAACATGAACATTAAATAC GTTAAGGACTGAAGGGTCAGAATCAGTCATGATAACATATGATTTCTGCCTCATGTATAGTTCA TGTGGTTGCAGACCAGATTGTTGTCACGATTAACTACCAAATGCAAGTACTGATAAAATTGGTT GAATTAGCCAAATTGACCAACACTTATTTATAAAATAGAGCTAGATTATCATATAACTCATAAA CTGGGAGAGAGTATTTTACAGAAGATCCTAAAGCATGCATAATTACAAAATTAAAGATTTAAAA ATAACAATAATCTAAAAATAAGGTATTAATTGGAATAAAAATGGAATGTAAACAGCATATTAGA ATAAGTCCATGTTGAAATTCAAAACCCATACACACTATTTTCAGAGTTTACCAGAAGACGCAAA GAAATTTAAGTGAGGAAAAAAAAAAAGCAGCACAGGTGCCTCACTTGTAGTTATCAGGATTCAT GAAAAGCAGGGACCTATATGTTTTCTCAGCCTCCTCAAAGCGGCCAAGTTTCAACAAAATGCAG GCCATTTGTTCTTTGAACGATAGCTTGTCAACCTAGAAGAAAAAAATAATTATGTGCGCCCATC TTTCTGAGTAATATTTTTCCTCTTTACATGATTGAGAAAGATAAGACTTACAATTTTGCTCTCC TTCTTCTGCATCTCCTCAAGAGCTCTGTCCAGCATCCCACATTCCTCGAACAATGAAATCTGTG GAACAGCAATAACATTACATAACAAGTAAAGATGAAGTGAGTATTAAAATAACGCAAATTCTTT CCACTTTCTAGTTTCCAGAGCATGAAAAGAACTTAATACATAAATAAAAGTGATGGCATAAAAT CAGAACATAAGTAAAGAATCAATTTCATTCAGAAAGTTAGATTGTTTGAAGAAGAGATGGCCGG CAGCAAGTTTTCAACTAATATGAACCAGAGAGTGAATATAAATCATCATTCGAACACTTCGTAT TTACAGACAGCATTCTGCAAAACCAGCATCAAAATACAAAATACAACGCTACACAAATTACAGT ATGACCAACGCATATAATCCAGACAGATATCATATATGTCCTGATAATTCGTTGTTCATGAAAG TGTGAATGTGTATAAGTACAGCATTGCTACCGCAATCATATCCCAGAAATACAAGAGAATTTTG ACAGGCACCTTATACAGAAGCATTTCACTGTGTTCATATCGCTCATTCTCTGGGGGATAATCAT CTTCCAGTGTCCCCTCATATGCCTCCAATACTTCTATTGCCTTGGAAGAA

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.205764343

Conservation Information
Conserved circRNAs	NA
PMCS	0.205764343

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							24543535-24539940(+)
24544018-24544074(-)
						
						Potential amino acid sequence
						
							MKSYTEAFHCVHIAHSLGDNHLPVSPHMPPILLLPWKNWSAWSICITHSLFK*(+)
MLLYKISLFEECGMLDRALEEMQKKESKIVDKLSFKEQMACILLKLGRFEEAEKTYRSLLFMNP
DNYKYFIAVQKCLGLYSENGQYSTDDVDRLCELYSSLKEEYGWSSAVKRIPLDFLEGEKFQEAA
DNYVRPLLTKGVPSLFSDLSPLYEQPGKANILEELFLKLERSIRTSGCFPGSSHTEPPSTLLWT
LFLISQHYDRRGQYDIALDKIDEAISHTPTVIDLYSIKGKILQHAGNFSAAAALADEARSMDLA
DRYLNSECVMQMLQADQFFQGNRSIGGI*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	24543535-24539940(+) 24544018-24544074(-)
Potential amino acid sequence	MKSYTEAFHCVHIAHSLGDNHLPVSPHMPPILLLPWKNWSAWSICITHSLFK(+) MLLYKISLFEECGMLDRALEEMQKKESKIVDKLSFKEQMACILLKLGRFEEAEKTYRSLLFMNP DNYKYFIAVQKCLGLYSENGQYSTDDVDRLCELYSSLKEEYGWSSAVKRIPLDFLEGEKFQEAA DNYVRPLLTKGVPSLFSDLSPLYEQPGKANILEELFLKLERSIRTSGCFPGSSHTEPPSTLLWT LFLISQHYDRRGQYDIALDKIDEAISHTPTVIDLYSIKGKILQHAGNFSAAAALADEARSMDLA DRYLNSECVMQMLQADQFFQGNRSIGGI(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os01g0617500_circ_g.5

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