Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Gh_A10G0147_circ_g.7 |
ID in PlantcircBase | ghi_circ_001114 |
Alias | ghi_circ_000209_byXiang |
Organism | Gossypium hirsutum |
Position | chrA10: 1230244-1230471 JBrowse» |
Reference genome | v1.1 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Gh_A10G0147 |
Parent gene annotation |
SIMILAR TO: AT4G05320, polyubiquitin 10 |
Parent gene strand | - |
Alternative splicing | Gh_A10G0147_circ_g.2 Gh_A10G0147_circ_g.3 Gh_A10G0147_circ_g.4 Gh_A10G0147_circ_g.5 Gh_A10G0147_circ_g.6 |
Support reads | 612/373 |
Tissues | root/stem |
Exon boundary | No-No |
Splicing signals | CT-AC |
Number of exons covered | Gh_A10G0147:1 |
Conservation Information | |
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Conserved circRNAs |
zma_circ_004719 zma_circ_004718 zma_circ_004716 zma_circ_004717 zma_circ_004720 |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Xiang et al., 2018 |