Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | PGSC0003DMG400032167_circ_g.1 |
| ID in PlantcircBase | stu_circ_000014 |
| Alias | chr01:1125414|1130412 |
| Organism | Solanum tuberosum |
| Position | chr1: 1125415-1130412 JBrowse» |
| Reference genome | 3.0.38 |
| Type | ue-circRNA |
| Identification method | CIRI2 |
| Parent gene | PGSC0003DMG400032167 |
| Parent gene annotation |
Conserved gene of unknown function |
| Parent gene strand | - |
| Alternative splicing | NA |
| Support reads | NA |
| Tissues | stem |
| Exon boundary | No-No |
| Splicing signals | CT-CA |
| Number of exons covered | PGSC0003DMT400081946:1 PGSC0003DMT400081943:2 PGSC0003DMT400081947:1 PGSC0003DMT400081944:4 PGSC0003DMT400081948:2 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.114259596 |
| Functional Information | |
|---|---|
| Coding potential | NA |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Zhou et al., 2018 |