Detailed infomation of each circRNA
General Information | |
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CircRNA Name | PGSC0003DMG400032167_circ_g.1 |
ID in PlantcircBase | stu_circ_000014 |
Alias | chr01:1125414|1130412 |
Organism | Solanum tuberosum |
Position | chr1: 1125415-1130412 JBrowse» |
Reference genome | 3.0.38 |
Type | ue-circRNA |
Identification method | CIRI2 |
Parent gene | PGSC0003DMG400032167 |
Parent gene annotation |
Conserved gene of unknown function |
Parent gene strand | - |
Alternative splicing | NA |
Support reads | NA |
Tissues | stem |
Exon boundary | No-No |
Splicing signals | CT-CA |
Number of exons covered | PGSC0003DMT400081946:1 PGSC0003DMT400081943:2 PGSC0003DMT400081947:1 PGSC0003DMT400081944:4 PGSC0003DMT400081948:2 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.114259596 |
Functional Information | |
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Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Zhou et al., 2018 |