Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Os01g0182900_circ_igg.2 |
ID in PlantcircBase | osa_circ_000579 |
Alias | NA |
Organism | Oryza sativa |
Position | chr1: 4389625-4391453 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | igg-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder, circRNA_finder, find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | Os01g0182900_circ_igg.1 EPlOSAG00000000571_circ_ig.1 |
Support reads | 2 |
Tissues | shoot, root |
Exon boundary | No-Yes |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | osi_circ_011281 |
PMCS | 0.26619338 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |