circRNA
Detailed infomation of each circRNA
Detail information of Solyc01g080570.2_circ_igg.1
| General Information | |
|---|---|
| CircRNA Name | Solyc01g080570.2_circ_igg.1 |
| ID in PlantcircBase | sly_circ_000201 |
| Alias | NA |
| Organism | Solanum lycopersicum |
| Position | chr1: 79810653-79815189 JBrowse» |
| Reference genome | SL2.50.38 |
| Type | igg-circRNA |
| Identification method | Segemehl, CIRI |
| Parent gene | NA |
| Parent gene annotation | NA |
| Parent gene strand | NA |
| Alternative splicing | Solyc01g080570.2_circ_ig.1 |
| Support reads | NA |
| Tissues | fruit |
| Exon boundary | No-No |
| Splicing signals | TA-TG |
| Number of exons covered | NA |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.122228078 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Tan et al., 2017 |
