Plant Circular RNA Database

Detail information of Os02g0552000_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os02g0552000_circ_g.1
					
						ID in PlantcircBase
						osa_circ_014985
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 20812104-20814686  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os02g0552000						
					
						Parent gene annotation
						
							Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t055200
0-01);Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t
0552000-02)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os02g0552000_circ_g.2 Os02g0552000_circ_g.3 						
					
						Support reads
						2
					
						Tissues
						shoot
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0552000-02:9
Os02t0552000-01:9

General Information
CircRNA Name	Os02g0552000_circ_g.1
ID in PlantcircBase	osa_circ_014985
Alias	NA
Organism	Oryza sativa
Position	chr2: 20812104-20814686 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os02g0552000
Parent gene annotation	Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t055200 0-01);Similar to Transmembrane protein TM9SF3 (Fragment). (Os02t 0552000-02)
Parent gene strand	+
Alternative splicing	Os02g0552000_circ_g.2 Os02g0552000_circ_g.3
Support reads	2
Tissues	shoot
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0552000-02:9 Os02t0552000-01:9

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCTCACGCCTTCTGTCATTGCCCTCATGGGAGGACTGCTTCCTTTTGGTAGCATCTTCATTGAG
ATGTACTTTGTCTTCACATCATTTTGGAACTACAAGtaccaatcggaggagaaggttatgctct
gggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactactacagccttccgtt
ttgccatc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1329
Transcript exons: 20812104-20812296,20812406-20812510,20812660-20812677,20
812753-20812841,20812922-20813074,20813234-20813368,2081
3455-20813621,20814125-20814219,20814313-20814686
TACCAATCGGAGGAGAAGGTTATGCTCTGGGTGAACAAGGTTGGCCCGTACAACAACCCACAGG
AAACTTACAACTACTACAGCCTTCCGTTTTGCCATCCGTCCAATAACCCCGTGCATAAATGGGG
AGGGCTTGGGGAGGTTCTCGGTGGAAATGAGCTGATTGACAGCCAGATCGACATAAAGTTTGGA
AGGGATGTTGACAAGGGTACCATTTGTTCAATTGAACTTGATCCTGACAAGGCCAAACAGTTAT
CTGATGCGATTGAGAGTTCATATTGGTTTGAATTCTTCATTGATGATTTGCCTCTATGGGGTTT
TGTTGGAGAGGCAGACAGAAATAGCGATAACAAATATTTCCTTTTCACTCACAAGAACATCGTC
ATCAGATACAATGGCAATCAGATTATTCATGTTAATCTTACTCAAGAAAGTCCAAAGCTTATTG
ATGCGGGTAAGGCATTGGATATGACATATTCTGTCAAGTGGGAACCAACCAATGTAACATTTGC
TCACCGCTTTGATGTATACCTTGACTACCCTTTCTTTGAACACCAGATCCATTGGTTCTCAATC
TTCAATTCTTTCATGATGGTTATCTTTCTCACTGGGCTAGTGTCAATGATTTTGATGCGCACTC
TAAGAAATGACTATGCAAAGTATGCCCGCGACGATGATGATCTTGAAACTCTGGAAAGAGATGT
CAGTGAAGAATCTGGATGGAAGCTTGTCCATGGGGATGTTTTCCGGCCTCCTCGCAGTTTGGCT
CTTCTTTCAGCCCTTGTTGGTGTTGGCACACAGTTGTCTGCTCTTATTCTGCTAGTGATTTTGT
TGGCAATCATCGGAATGCTGTATATTGGGCGAGGAGCTATTGTCACAACATTCATTGTTTGTTA
TGCCCTTACTTCATTCATCTCTGGATATGTCAGTGGTGCACTTTATTCACGGCATGGGGGGAAA
AACTGGATCAAGGCAATGATTATGACAGCATCACTATTTCCGTTTATGTGCTTTGGAATTGGCC
TAGTGCTTAACACAATCGCTATATTCTATCGATCATTAGCTGCCATACCATTTGGTACTATGGT
GGTTGTGTTCATCCTGTGGGCCTTCATATCTTTCCCTCTTGCTCTTTTGGGAACTGTTGTTGGT
AGAAACTGGAGTGGTGCCCCAAATAATCCATGCAGAGTAAAGACTATTCCTCGCCCTATCCCTG
AGAAGAAATGGTACCTCACGCCTTCTGTCATTGCCCTCATGGGAGGACTGCTTCCTTTTGGTAG
CATCTTCATTGAGATGTACTTTGTCTTCACATCATTTTGGAACTACAAG
						
					

						Genomic sequence
						
							TACCAATCGGAGGAGAAGGTTATGCTCTGGGTGAACAAGGTTGGCCCGTACAACAACCCACAGG
AAACTTACAACTACTACAGCCTTCCGTTTTGCCATCCGTCCAATAACCCCGTGCATAAATGGGG
AGGGCTTGGGGAGGTTCTCGGTGGAAATGAGCTGATTGACAGCCAGATCGACATAAAGTTTGGA
AGTGAGCAATCACTTTTGTTGTGCATTGTTCTTTTTATGCTGCTTCAGTTTTGAACATTGAAAC
GGGAAGGTAAAATGCAGTGTTTAAGACTGATCATGGTTTGTCTCAGGGGATGTTGACAAGGGTA
CCATTTGTTCAATTGAACTTGATCCTGACAAGGCCAAACAGTTATCTGATGCGATTGAGAGTTC
ATATTGGTTTGAATTCTTCATTGGTAAGCTGTTCTGGTTTCCTTCTTGACTCCGCTGGTGTGTT
TACTTGCCATTTTTCAGTACGCATAAACATTTTTACGCACTGTGACTTATTGATTTACTTATTA
TCCTTTTCTGCACACTTCTGGGAAATTCTATGCCACTATCAAAGATGATTTGCCTCTATGGGGT
ATGTATCCTCTTTTATCATTACTATTTTCTCTCAAAGATCTTATATATAGTCTAATAACTTATA
ACTTAACAGGTTTTGTTGGAGAGGCAGACAGAAATAGCGATAACAAATATTTCCTTTTCACTCA
CAAGAACATCGTCATCAGATACAATGGCAATCAGGTTTGGGTTTCATGAACTTGCATTTATTCC
TTCGCAGGACCTTCAAGAAACTGAGTATTACTACTGTTACATTCCTGTAGATTATTCATGTTAA
TCTTACTCAAGAAAGTCCAAAGCTTATTGATGCGGGTAAGGCATTGGATATGACATATTCTGTC
AAGTGGGAACCAACCAATGTAACATTTGCTCACCGCTTTGATGTATACCTTGACTACCCTTTCT
TTGAACACCAGGTAAGAACTCAGTTTCTGCAATTAAAGCCTGGTTCTGCACCTTGGTTCTTATG
TATTTTGTTGCCAATTTTCCACATAAAAAATTATGCCTTGATTCTCAATTTCCCATGTATATCT
TGCAGCATTTCCTCTGACCACAGATAATCCATTTTATGGCAGATCCATTGGTTCTCAATCTTCA
ATTCTTTCATGATGGTTATCTTTCTCACTGGGCTAGTGTCAATGATTTTGATGCGCACTCTAAG
AAATGACTATGCAAAGTATGCCCGCGACGATGATGATCTTGAAACTCTGGTGATTGACTATCTA
TATTCAAATAATGTACAAATTCTGTTATGCGCTTCATACATCCTCTTGCTGACATTTTTATTCA
ATATCAGGAAAGAGATGTCAGTGAAGAATCTGGATGGAAGCTTGTCCATGGGGATGTTTTCCGG
CCTCCTCGCAGTTTGGCTCTTCTTTCAGCCCTTGTTGGTGTTGGCACACAGTTGTCTGCTCTTA
TTCTGCTAGTGATTTTGTTGGCAATCATCGGAATGCTGTATATTGGGTATGCACATCATTTATG
ATTTACCTCAAATCACTACAATTAACACCGATTTCTATAAAGGCAGCTTCTACTAAATGCCTTA
GGCCCCTAAGTTTTCTCCATCCTGTCACTTGTTACTTTTGTCAAGCCAAACAGCATACACCACC
TCCAGTTTAAAATACACAATTTGTTAACGTAGACAGGACTGCATTGGTTTTCGCAGTAAGGCTT
TCCAGATTCTAGGTGTGCCTGAATGTGTGGTTATAACTACAATCACATTATGACATGTGAGGAA
TTGTCAAATCATAATTACCGCCTTCACATGAAACCCAGCCCCCTTTTCTAATTTTCGGCCTGTC
AATGAACTGCTTAAAAGGTTCTTTGGAGTGCACATTTATCTTTATTTTTGATATTTTGCTTTTA
TTTCACAAGTAGCTGAACTACTTTATGAAGCATTTAAGTCTAATCGTACTTTCTGATTCTATGC
AAAAGCGCATCTCTCACACCTTATATTCTTATTGTAGGCGAGGAGCTATTGTCACAACATTCAT
TGTTTGTTATGCCCTTACTTCATTCATCTCTGGATATGTCAGTGGTGCACTTTATTCACGGCAT
GGGGGTATGAACTCAGTTTACTTTACATCTTGAACAGGCACACACCTATTTTACTATAAGATGC
TCACCTCATTTAAATCCTTGGTTTGCTGAGCAGGGAAAAACTGGATCAAGGCAATGATTATGAC
AGCATCACTATTTCCGTTTATGTGCTTTGGAATTGGCCTAGTGCTTAACACAATCGCTATATTC
TATCGATCATTAGCTGCCATACCATTTGGTACTATGGTGGTTGTGTTCATCCTGTGGGCCTTCA
TATCTTTCCCTCTTGCTCTTTTGGGAACTGTTGTTGGTAGAAACTGGAGTGGTGCCCCAAATAA
TCCATGCAGAGTAAAGACTATTCCTCGCCCTATCCCTGAGAAGAAATGGTACCTCACGCCTTCT
GTCATTGCCCTCATGGGAGGACTGCTTCCTTTTGGTAGCATCTTCATTGAGATGTACTTTGTCT
TCACATCATTTTGGAACTACAAG
						
					

			
		

Sequences
Splice junction sequence	CCTCACGCCTTCTGTCATTGCCCTCATGGGAGGACTGCTTCCTTTTGGTAGCATCTTCATTGAG ATGTACTTTGTCTTCACATCATTTTGGAACTACAAGtaccaatcggaggagaaggttatgctct gggtgaacaaggttggcccgtacaacaacccacaggaaacttacaactactacagccttccgtt ttgccatc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1329 Transcript exons: 20812104-20812296,20812406-20812510,20812660-20812677,20 812753-20812841,20812922-20813074,20813234-20813368,2081 3455-20813621,20814125-20814219,20814313-20814686 TACCAATCGGAGGAGAAGGTTATGCTCTGGGTGAACAAGGTTGGCCCGTACAACAACCCACAGG AAACTTACAACTACTACAGCCTTCCGTTTTGCCATCCGTCCAATAACCCCGTGCATAAATGGGG AGGGCTTGGGGAGGTTCTCGGTGGAAATGAGCTGATTGACAGCCAGATCGACATAAAGTTTGGA AGGGATGTTGACAAGGGTACCATTTGTTCAATTGAACTTGATCCTGACAAGGCCAAACAGTTAT CTGATGCGATTGAGAGTTCATATTGGTTTGAATTCTTCATTGATGATTTGCCTCTATGGGGTTT TGTTGGAGAGGCAGACAGAAATAGCGATAACAAATATTTCCTTTTCACTCACAAGAACATCGTC ATCAGATACAATGGCAATCAGATTATTCATGTTAATCTTACTCAAGAAAGTCCAAAGCTTATTG ATGCGGGTAAGGCATTGGATATGACATATTCTGTCAAGTGGGAACCAACCAATGTAACATTTGC TCACCGCTTTGATGTATACCTTGACTACCCTTTCTTTGAACACCAGATCCATTGGTTCTCAATC TTCAATTCTTTCATGATGGTTATCTTTCTCACTGGGCTAGTGTCAATGATTTTGATGCGCACTC TAAGAAATGACTATGCAAAGTATGCCCGCGACGATGATGATCTTGAAACTCTGGAAAGAGATGT CAGTGAAGAATCTGGATGGAAGCTTGTCCATGGGGATGTTTTCCGGCCTCCTCGCAGTTTGGCT CTTCTTTCAGCCCTTGTTGGTGTTGGCACACAGTTGTCTGCTCTTATTCTGCTAGTGATTTTGT TGGCAATCATCGGAATGCTGTATATTGGGCGAGGAGCTATTGTCACAACATTCATTGTTTGTTA TGCCCTTACTTCATTCATCTCTGGATATGTCAGTGGTGCACTTTATTCACGGCATGGGGGGAAA AACTGGATCAAGGCAATGATTATGACAGCATCACTATTTCCGTTTATGTGCTTTGGAATTGGCC TAGTGCTTAACACAATCGCTATATTCTATCGATCATTAGCTGCCATACCATTTGGTACTATGGT GGTTGTGTTCATCCTGTGGGCCTTCATATCTTTCCCTCTTGCTCTTTTGGGAACTGTTGTTGGT AGAAACTGGAGTGGTGCCCCAAATAATCCATGCAGAGTAAAGACTATTCCTCGCCCTATCCCTG AGAAGAAATGGTACCTCACGCCTTCTGTCATTGCCCTCATGGGAGGACTGCTTCCTTTTGGTAG CATCTTCATTGAGATGTACTTTGTCTTCACATCATTTTGGAACTACAAG
Genomic sequence	TACCAATCGGAGGAGAAGGTTATGCTCTGGGTGAACAAGGTTGGCCCGTACAACAACCCACAGG AAACTTACAACTACTACAGCCTTCCGTTTTGCCATCCGTCCAATAACCCCGTGCATAAATGGGG AGGGCTTGGGGAGGTTCTCGGTGGAAATGAGCTGATTGACAGCCAGATCGACATAAAGTTTGGA AGTGAGCAATCACTTTTGTTGTGCATTGTTCTTTTTATGCTGCTTCAGTTTTGAACATTGAAAC GGGAAGGTAAAATGCAGTGTTTAAGACTGATCATGGTTTGTCTCAGGGGATGTTGACAAGGGTA CCATTTGTTCAATTGAACTTGATCCTGACAAGGCCAAACAGTTATCTGATGCGATTGAGAGTTC ATATTGGTTTGAATTCTTCATTGGTAAGCTGTTCTGGTTTCCTTCTTGACTCCGCTGGTGTGTT TACTTGCCATTTTTCAGTACGCATAAACATTTTTACGCACTGTGACTTATTGATTTACTTATTA TCCTTTTCTGCACACTTCTGGGAAATTCTATGCCACTATCAAAGATGATTTGCCTCTATGGGGT ATGTATCCTCTTTTATCATTACTATTTTCTCTCAAAGATCTTATATATAGTCTAATAACTTATA ACTTAACAGGTTTTGTTGGAGAGGCAGACAGAAATAGCGATAACAAATATTTCCTTTTCACTCA CAAGAACATCGTCATCAGATACAATGGCAATCAGGTTTGGGTTTCATGAACTTGCATTTATTCC TTCGCAGGACCTTCAAGAAACTGAGTATTACTACTGTTACATTCCTGTAGATTATTCATGTTAA TCTTACTCAAGAAAGTCCAAAGCTTATTGATGCGGGTAAGGCATTGGATATGACATATTCTGTC AAGTGGGAACCAACCAATGTAACATTTGCTCACCGCTTTGATGTATACCTTGACTACCCTTTCT TTGAACACCAGGTAAGAACTCAGTTTCTGCAATTAAAGCCTGGTTCTGCACCTTGGTTCTTATG TATTTTGTTGCCAATTTTCCACATAAAAAATTATGCCTTGATTCTCAATTTCCCATGTATATCT TGCAGCATTTCCTCTGACCACAGATAATCCATTTTATGGCAGATCCATTGGTTCTCAATCTTCA ATTCTTTCATGATGGTTATCTTTCTCACTGGGCTAGTGTCAATGATTTTGATGCGCACTCTAAG AAATGACTATGCAAAGTATGCCCGCGACGATGATGATCTTGAAACTCTGGTGATTGACTATCTA TATTCAAATAATGTACAAATTCTGTTATGCGCTTCATACATCCTCTTGCTGACATTTTTATTCA ATATCAGGAAAGAGATGTCAGTGAAGAATCTGGATGGAAGCTTGTCCATGGGGATGTTTTCCGG CCTCCTCGCAGTTTGGCTCTTCTTTCAGCCCTTGTTGGTGTTGGCACACAGTTGTCTGCTCTTA TTCTGCTAGTGATTTTGTTGGCAATCATCGGAATGCTGTATATTGGGTATGCACATCATTTATG ATTTACCTCAAATCACTACAATTAACACCGATTTCTATAAAGGCAGCTTCTACTAAATGCCTTA GGCCCCTAAGTTTTCTCCATCCTGTCACTTGTTACTTTTGTCAAGCCAAACAGCATACACCACC TCCAGTTTAAAATACACAATTTGTTAACGTAGACAGGACTGCATTGGTTTTCGCAGTAAGGCTT TCCAGATTCTAGGTGTGCCTGAATGTGTGGTTATAACTACAATCACATTATGACATGTGAGGAA TTGTCAAATCATAATTACCGCCTTCACATGAAACCCAGCCCCCTTTTCTAATTTTCGGCCTGTC AATGAACTGCTTAAAAGGTTCTTTGGAGTGCACATTTATCTTTATTTTTGATATTTTGCTTTTA TTTCACAAGTAGCTGAACTACTTTATGAAGCATTTAAGTCTAATCGTACTTTCTGATTCTATGC AAAAGCGCATCTCTCACACCTTATATTCTTATTGTAGGCGAGGAGCTATTGTCACAACATTCAT TGTTTGTTATGCCCTTACTTCATTCATCTCTGGATATGTCAGTGGTGCACTTTATTCACGGCAT GGGGGTATGAACTCAGTTTACTTTACATCTTGAACAGGCACACACCTATTTTACTATAAGATGC TCACCTCATTTAAATCCTTGGTTTGCTGAGCAGGGAAAAACTGGATCAAGGCAATGATTATGAC AGCATCACTATTTCCGTTTATGTGCTTTGGAATTGGCCTAGTGCTTAACACAATCGCTATATTC TATCGATCATTAGCTGCCATACCATTTGGTACTATGGTGGTTGTGTTCATCCTGTGGGCCTTCA TATCTTTCCCTCTTGCTCTTTTGGGAACTGTTGTTGGTAGAAACTGGAGTGGTGCCCCAAATAA TCCATGCAGAGTAAAGACTATTCCTCGCCCTATCCCTGAGAAGAAATGGTACCTCACGCCTTCT GTCATTGCCCTCATGGGAGGACTGCTTCCTTTTGGTAGCATCTTCATTGAGATGTACTTTGTCT TCACATCATTTTGGAACTACAAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.3002248

Conservation Information
Conserved circRNAs	NA
PMCS	0.3002248

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							20812126-20814683(+)
20812225-20814671(-)
						
					

						Potential amino acid sequence
						
							MLWVNKVGPYNNPQETYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGT
ICSIELDPDKAKQLSDAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQ
IIHVNLTQESPKLIDAGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMV
IFLTGLVSMILMRTLRNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVG
VGTQLSALILLVILLAIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMI
MTASLFPFMCFGIGLVLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAP
NNPCRVKTIPRPIPEKKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYKYQSEEKVMLWVN
KVGPYNNPQETYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIE
LDPDKAKQLSDAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQIIHVN
LTQESPKLIDAGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTG
LVSMILMRTLRNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVGVGTQL
SALILLVILLAIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMIMTASL
FPFMCFGIGLVLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAPNNPCR
VKTIPRPIPEKKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYKYQSEEKVMLWVNKVGPY
NNPQETYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIELDPDK
AKQLSDAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQIIHVNLTQES
PKLIDAGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMI
LMRTLRNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVGVGTQLSALIL
LVILLAIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMIMTASLFPFMC
FGIGLVLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIP
RPIPEKKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYKYQSEEKVMLWVNKVGPYNNPQE
TYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIELDPDKAKQLS
DAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQIIHVNLTQESPKLID
AGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTL
RNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVGVGTQLSALILLVILL
AIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMIMTASLFPFMCFGIGL
VLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPE
KKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYK(+)
MHGVIGRMAKRKAVVVVSFLWVVVRANLVHPEHNLLLRLVLVVPK*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	20812126-20814683(+) 20812225-20814671(-)
Potential amino acid sequence	MLWVNKVGPYNNPQETYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGT ICSIELDPDKAKQLSDAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQ IIHVNLTQESPKLIDAGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMV IFLTGLVSMILMRTLRNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVG VGTQLSALILLVILLAIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMI MTASLFPFMCFGIGLVLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAP NNPCRVKTIPRPIPEKKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYKYQSEEKVMLWVN KVGPYNNPQETYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIE LDPDKAKQLSDAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQIIHVN LTQESPKLIDAGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTG LVSMILMRTLRNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVGVGTQL SALILLVILLAIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMIMTASL FPFMCFGIGLVLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAPNNPCR VKTIPRPIPEKKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYKYQSEEKVMLWVNKVGPY NNPQETYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIELDPDK AKQLSDAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQIIHVNLTQES PKLIDAGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMI LMRTLRNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVGVGTQLSALIL LVILLAIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMIMTASLFPFMC FGIGLVLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIP RPIPEKKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYKYQSEEKVMLWVNKVGPYNNPQE TYNYYSLPFCHPSNNPVHKWGGLGEVLGGNELIDSQIDIKFGRDVDKGTICSIELDPDKAKQLS DAIESSYWFEFFIDDLPLWGFVGEADRNSDNKYFLFTHKNIVIRYNGNQIIHVNLTQESPKLID AGKALDMTYSVKWEPTNVTFAHRFDVYLDYPFFEHQIHWFSIFNSFMMVIFLTGLVSMILMRTL RNDYAKYARDDDDLETLERDVSEESGWKLVHGDVFRPPRSLALLSALVGVGTQLSALILLVILL AIIGMLYIGRGAIVTTFIVCYALTSFISGYVSGALYSRHGGKNWIKAMIMTASLFPFMCFGIGL VLNTIAIFYRSLAAIPFGTMVVVFILWAFISFPLALLGTVVGRNWSGAPNNPCRVKTIPRPIPE KKWYLTPSVIALMGGLLPFGSIFIEMYFVFTSFWNYK(+) MHGVIGRMAKRKAVVVVSFLWVVVRANLVHPEHNLLLRLVLVVPK*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os02g0552000_circ_g.1

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