Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d016926_circ_g.1 |
ID in PlantcircBase | zma_circ_008727 |
Alias | Zm05circ00106 |
Organism | Zea mays |
Position | chr5: 180148537-180149417 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | CIRI2 |
Parent gene | Zm00001d016926 |
Parent gene annotation |
ATATH13 |
Parent gene strand | + |
Alternative splicing | Zm00001d016926_circ_g.2 |
Support reads | NA |
Tissues | leaf, endosperm |
Exon boundary | No-Yes |
Splicing signals | GT-AG |
Number of exons covered | Zm00001d016926_T001:2 Zm00001d016926_T002:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.244158683 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Han et al., 2020 |