Detailed infomation of each circRNA
| General Information | |
|---|---|
| CircRNA Name | Zm00001d039563_circ_g.1 |
| ID in PlantcircBase | zma_circ_004122 |
| Alias | control_test_circ_005183 |
| Organism | Zea mays |
| Position | chr3: 8047181-8051969 JBrowse» |
| Reference genome | AGPv4.38 |
| Type | e-circRNA |
| Identification method | find_circ |
| Parent gene | Zm00001d039563 |
| Parent gene annotation |
ARM repeat superfamily protein |
| Parent gene strand | + |
| Alternative splicing | NA |
| Support reads | NA |
| Tissues | seedling |
| Exon boundary | No-No |
| Splicing signals | CT-CA |
| Number of exons covered | Zm00001d039563_T011:2 Zm00001d039563_T003:2 Zm00001d039563_T008:2 Zm00001d039563_T006:2 Zm00001d039563_T004:2 Zm00001d039563_T013:2 Zm00001d039563_T001:2 Zm00001d039563_T010:2 Zm00001d039563_T002:2 |
| Conservation Information | |
|---|---|
| Conserved circRNAs | NA |
| PMCS | 0.049736787 |
| Functional Information | |
|---|---|
| Coding potential | N |
| Potential coding position |
NA |
| Potential amino acid sequence |
NA |
| Sponge-miRNAs | NA |
| circRNA-miRNA-mRNA network | VISUALIZATION |
| Potential function description | NA |
| Other Information | |
|---|---|
| References | Tang et al., 2018 |