Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | Zm00001d039563_circ_g.1 |
ID in PlantcircBase | zma_circ_004122 |
Alias | control_test_circ_005183 |
Organism | Zea mays |
Position | chr3: 8047181-8051969 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d039563 |
Parent gene annotation |
ARM repeat superfamily protein |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | CT-CA |
Number of exons covered | Zm00001d039563_T011:2 Zm00001d039563_T003:2 Zm00001d039563_T008:2 Zm00001d039563_T006:2 Zm00001d039563_T004:2 Zm00001d039563_T013:2 Zm00001d039563_T001:2 Zm00001d039563_T010:2 Zm00001d039563_T002:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.049736787 |
Functional Information | |
---|---|
Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Tang et al., 2018 |