Detailed infomation of each circRNA
General Information | |
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CircRNA Name | Zm00001d024386_circ_g.2 |
ID in PlantcircBase | zma_circ_006215 |
Alias | cold_test_circ_002230 |
Organism | Zea mays |
Position | chr10: 68324877-68325069 JBrowse» |
Reference genome | AGPv4.38 |
Type | e-circRNA |
Identification method | find_circ |
Parent gene | Zm00001d024386 |
Parent gene annotation |
xyloglucan endo-transglycosylase/hydrolase1 |
Parent gene strand | - |
Alternative splicing | Zm00001d024382_circ_ag.1 Zm00001d024382_circ_ag.2 Zm00001d024386_circ_g.1 |
Support reads | NA |
Tissues | seedling |
Exon boundary | No-No |
Splicing signals | GT-TA |
Number of exons covered | Zm00001d024386_T004:1 Zm00001d024386_T005:1 Zm00001d024386_T003:1 Zm00001d024386_T002:1 Zm00001d024386_T001:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.601362737 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Tang et al., 2018 |