Plant Circular RNA Database

Detail information of Os10g0150700_circ_ag.1

			
						 General Information
					
						CircRNA Name
						Os10g0150700_circ_ag.1
					
						ID in PlantcircBase
						osa_circ_006227
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr10: 3021272-3031829  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ag-circRNA							
									
						Identification method
						CIRI, find_circ
					
						Parent gene
						
							NA						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						NA
					
						Alternative splicing
						
							Os10g0150700_circ_g.1 Os10g0150700_circ_g.2 Os10g0150700_circ_g.3 						
					
						Support reads
						51
					
						Tissues
						shoot, seed, pistil
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						NA

General Information
CircRNA Name	Os10g0150700_circ_ag.1
ID in PlantcircBase	osa_circ_006227
Alias	NA
Organism	Oryza sativa
Position	chr10: 3021272-3031829 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ag-circRNA
Identification method	CIRI, find_circ
Parent gene	NA
Parent gene annotation	NA
Parent gene strand	NA
Alternative splicing	Os10g0150700_circ_g.1 Os10g0150700_circ_g.2 Os10g0150700_circ_g.3
Support reads	51
Tissues	shoot, seed, pistil
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	NA

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCA
CCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGAacctccaagtggcgatcaagtgcaagaa
caccaacggtgagtacgagagcaaggctgccggaaagctcgatggcaccggcgctttcagcgtc
cccctcga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 388
Transcript exons: 3021272-3021462,3031633-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGAC
TAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGT
CGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTC
AAGA
Transcript length: 392
Transcript exons: 3021272-3021476,3031643-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGA
GGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGT
CGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGC
TTTCAAGA
Transcript length: 444
Transcript exons: 3021272-3021494,3021599-3021731,3031742-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGC
CTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTT
CCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAGGCGGAGAGGCGGCGTCGGTCGTCGTCG
GCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA
Transcript length: 532
Transcript exons: 3021272-3021475,3021588-3021732,3031647-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCAGCCACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCG
GAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGA
AGCCAGTGCCACCTAAGCCAGAGCCGAAGCACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCA
GGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCG
GAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAA
AGCTGAGGATGCTTTCAAGA
Transcript length: 540
Transcript exons: 3021272-3021503,3021568-3021688,3031643-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACACACTTCCACAAGAAGCCGGTGCCA
CCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCG
ACCATATCCACAAGAAGGAGAAGCACTTCTTCGGCTACACAGAGCTAAGCTAGGGTTAGCTCAG
CAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGC
CGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAG
AACATGAAAGCTGAGGATGCTTTCAAGA
Transcript length: 555
Transcript exons: 3021272-3021502,3021605-3021726,3031628-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACCGAAGCCGGAGCCACCCAAGCCGAA
GCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCAC
TTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGTACACATCAGCAATAGCTACACAGAGCTAAG
CTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGT
CTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCC
GACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA
Transcript length: 562
Transcript exons: 3021272-3021498,3021593-3021732,3031635-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGCCAAGCCGGAGCCGAAGCCGGAGCCACCC
AAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCT
TCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAGCAGCAATAGCTACACAG
AGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTT
GTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAA
GTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA
Transcript length: 563
Transcript exons: 3021272-3021498,3021593-3021731,3031633-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGCCAAGCCGGAGCCGAAGCCGGAGCCACCC
AAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCT
TCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAATCAGCAATAGCTACACA
GAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTT
TGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCA
AGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA
Transcript length: 570
Transcript exons: 3021272-3021498,3021582-3021731,3031637-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGGCCGGTGCCACCCAAGCCGGAGCCGAAGC
CGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGA
GAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAGCAATAG
CTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCT
CGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGC
ACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA
Transcript length: 588
Transcript exons: 3021272-3021498,3021571-3021736,3031635-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGTTCCACAAGAAGCCGGTGCCACCCAAGCC
GGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATC
CACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGC
CGAAGCCAGCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCC
TCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCG
GCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGG
ATGCTTTCAAGA
Transcript length: 590
Transcript exons: 3021272-3021498,3021565-3021732,3031635-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGGACCACTTCCACAAGAAGCCGGTGCCACC
CAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGAC
CATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGC
CAGAGCCGAAGCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCT
CCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGG
CGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGA
GGATGCTTTCAAGA
Transcript length: 595
Transcript exons: 3021272-3021504,3021565-3021731,3031635-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACACGACCACTTCCACAAGAAGCCGGT
GCCACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTC
CTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCAC
CTAAGCCAGAGCCGAACAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAG
GTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGG
AGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAA
GCTGAGGATGCTTTCAAGA
Transcript length: 596
Transcript exons: 3021272-3021502,3021566-3021730,3031630-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACACCACTTCCACAAGAAGCCGGTGCC
ACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTC
GACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTA
AGCCAGAGCCGACACATCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCA
GGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCG
GAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAA
AGCTGAGGATGCTTTCAAGA
Transcript length: 598
Transcript exons: 3021272-3021498,3021568-3021735,3031627-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGCACTTCCACAAGAAGCCGGTGCCACCCAA
GCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCAT
ATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAG
AGCCGAAGCCACTACACATCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGG
CAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGG
CGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATG
AAAGCTGAGGATGCTTTCAAGA
Transcript length: 604
Transcript exons: 3021272-3021502,3021565-3021740,3031633-3031829
ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA
GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC
GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA
TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACGACCACTTCCACAAGAAGCCGGTGC
CACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCT
CGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCT
AAGCCAGAGCCGAAGCCAGAGCCATCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAG
CAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGC
CGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAG
AACATGAAAGCTGAGGATGCTTTCAAGA
						
					

						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.						
					

			
		

Sequences
Splice junction sequence	GCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCA CCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGAacctccaagtggcgatcaagtgcaagaa caccaacggtgagtacgagagcaaggctgccggaaagctcgatggcaccggcgctttcagcgtc cccctcga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 388 Transcript exons: 3021272-3021462,3031633-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGAC TAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGT CGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTC AAGA Transcript length: 392 Transcript exons: 3021272-3021476,3031643-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGA GGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGT CGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGC TTTCAAGA Transcript length: 444 Transcript exons: 3021272-3021494,3021599-3021731,3031742-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGC CTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTT CCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAGGCGGAGAGGCGGCGTCGGTCGTCGTCG GCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA Transcript length: 532 Transcript exons: 3021272-3021475,3021588-3021732,3031647-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCAGCCACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCG GAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGA AGCCAGTGCCACCTAAGCCAGAGCCGAAGCACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCA GGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCG GAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAA AGCTGAGGATGCTTTCAAGA Transcript length: 540 Transcript exons: 3021272-3021503,3021568-3021688,3031643-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACACACTTCCACAAGAAGCCGGTGCCA CCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCG ACCATATCCACAAGAAGGAGAAGCACTTCTTCGGCTACACAGAGCTAAGCTAGGGTTAGCTCAG CAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGC CGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAG AACATGAAAGCTGAGGATGCTTTCAAGA Transcript length: 555 Transcript exons: 3021272-3021502,3021605-3021726,3031628-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACCGAAGCCGGAGCCACCCAAGCCGAA GCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCAC TTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGTACACATCAGCAATAGCTACACAGAGCTAAG CTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGT CTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCC GACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA Transcript length: 562 Transcript exons: 3021272-3021498,3021593-3021732,3031635-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGCCAAGCCGGAGCCGAAGCCGGAGCCACCC AAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCT TCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAGCAGCAATAGCTACACAG AGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTT GTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAA GTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA Transcript length: 563 Transcript exons: 3021272-3021498,3021593-3021731,3031633-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGCCAAGCCGGAGCCGAAGCCGGAGCCACCC AAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGAGAAGCACTTCT TCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAATCAGCAATAGCTACACA GAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTT TGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCA AGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA Transcript length: 570 Transcript exons: 3021272-3021498,3021582-3021731,3031637-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGGCCGGTGCCACCCAAGCCGGAGCCGAAGC CGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATCCACAAGAAGGA GAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGCCGAAGCAATAG CTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCT CGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGC ACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGGATGCTTTCAAGA Transcript length: 588 Transcript exons: 3021272-3021498,3021571-3021736,3031635-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGTTCCACAAGAAGCCGGTGCCACCCAAGCC GGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCATATC CACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAGAGC CGAAGCCAGCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCTCC TCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGGCG GCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGAGG ATGCTTTCAAGA Transcript length: 590 Transcript exons: 3021272-3021498,3021565-3021732,3031635-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGGACCACTTCCACAAGAAGCCGGTGCCACC CAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGAC CATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGC CAGAGCCGAAGCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAGGTGCT CCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGGAGAGG CGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAAGCTGA GGATGCTTTCAAGA Transcript length: 595 Transcript exons: 3021272-3021504,3021565-3021731,3031635-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACACGACCACTTCCACAAGAAGCCGGT GCCACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTC CTCGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCAC CTAAGCCAGAGCCGAACAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCAG GTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCGG AGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAAA GCTGAGGATGCTTTCAAGA Transcript length: 596 Transcript exons: 3021272-3021502,3021566-3021730,3031630-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACACCACTTCCACAAGAAGCCGGTGCC ACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTC GACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTA AGCCAGAGCCGACACATCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGGCA GGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGGCG GAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATGAA AGCTGAGGATGCTTTCAAGA Transcript length: 598 Transcript exons: 3021272-3021498,3021568-3021735,3031627-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGCACTTCCACAAGAAGCCGGTGCCACCCAA GCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCTCGACCAT ATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCTAAGCCAG AGCCGAAGCCACTACACATCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAGCAATGG CAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGCCGTCGG CGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAGAACATG AAAGCTGAGGATGCTTTCAAGA Transcript length: 604 Transcript exons: 3021272-3021502,3021565-3021740,3031633-3031829 ACCTCCAAGTGGCGATCAAGTGCAAGAACACCAACGGTGAGTACGAGAGCAAGGCTGCCGGAAA GCTCGATGGCACCGGCGCTTTCAGCGTCCCCCTCGACGCCGACCTTGACAGCTCCGACTGCATC GCTCAGCTCCACAGCGCCAACAACGAGCCATGCCCTGGTCAGGAGCCATCCAAGATCGTGCCAA TGTCGGAGGGCACCTTTGTCGCCATTGCCGGCAAGACACGACCACTTCCACAAGAAGCCGGTGC CACCCAAGCCGGAGCCGAAGCCGGAGCCACCCAAGCCGAAGCCTGAGCCGGAACACCCCTTCCT CGACCATATCCACAAGAAGGAGAAGCACTTCTTCGACCACTTCCACAAGAAGCCAGTGCCACCT AAGCCAGAGCCGAAGCCAGAGCCATCAGCAATAGCTACACAGAGCTAAGCTAGGGTTAGCTCAG CAATGGCAGGTGCTCCTCGAGGACTAGTTCTCCTCGGCGTTTGTGCCGTCTTGATGGCGGTCGC CGTCGGCGGAGAGGCGGCGTCGGTCGTCGTCGGCACGGCCAAGTGCGCCGACTGCACCAGGAAG AACATGAAAGCTGAGGATGCTTTCAAGA
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.409015154

Conservation Information
Conserved circRNAs	NA
PMCS	0.409015154

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os10g0150700_circ_ag.1

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