Plant Circular RNA Database

Detail information of Os09g0569400_circ_g.1

			
						 General Information
					
						CircRNA Name
						Os09g0569400_circ_g.1
					
						ID in PlantcircBase
						osa_circ_040261
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr9: 22721339-22726308  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os09g0569400						
					
						Parent gene annotation
						
							Beta-lactamase-like domain containing protein. (Os09t0569400-01)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os09g0569400_circ_g.2 Os09g0569400_circ_g.3 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os09t0569400-01:15

General Information
CircRNA Name	Os09g0569400_circ_g.1
ID in PlantcircBase	osa_circ_040261
Alias	NA
Organism	Oryza sativa
Position	chr9: 22721339-22726308 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os09g0569400
Parent gene annotation	Beta-lactamase-like domain containing protein. (Os09t0569400-01)
Parent gene strand	-
Alternative splicing	Os09g0569400_circ_g.2 Os09g0569400_circ_g.3
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os09t0569400-01:15

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGGTGCAGATAGTCCGAGATGTTTCATAGCATATGGCAAAGCTCCTAGATGCATGGTATCGGCA
TGAGACAAAAGAACTGCATCTATTGTTGGTGCAACCctgcaaacctttatttgccaggaattgc
ttaaaatcagccaatttcaaatcacccacaagaactgacttgtgggctgctggagttgacgacg
ggggcaac

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTGCAAACCTTTATTTGCCAGGAATTGCTTAAAATCAGCCAATTTCAAATCACCCACAAGAACT
GACTTGTGGGCTGCTGGAGTTGACGACGGGGGCAACAAAGTAAGCTTGTCATCTGTTTTTCCAA
CCTCTGCATCTACCCATGCAATTTCATGCTCACCCAACTGCACAGAGTGCCAGTGTTAGTGCTT
TCTTACTGCTAATCCATAACAACAAAGTGCAGTTTCAGGTTAGCCCCCAAAGGTTGTATACTTG
TATGGGCAAAAAAAAAAATAATCACAGGCTTGTGGTATCAGGTTCACAGATAATTTTGTCATGA
AAGGCTACTTATGCTGAAAAACATTCAACTGAGTAGGGCAACAGAATGGACCATCCAGTAAGCA
GTATGGAATCAATCATTTCTCAAAACTGTATTGGAAGGACCTCGGTCATTCATATTCTTGTATG
GGCAAAAAAAAAAAGAAATAATCACAGGCTTGTGGTATCTGGTTCACAGACAATTTTGTCATGA
AAGGCTTCTTATGCTGAAAAACATTCGACTGACTAGGGCAACAGAATGGACCATCCAGTAACCA
GTATGGAATCAATCATTTCTCAAAACTGCATTGGAAGGACCTCGGTCATTCATATACATATTGC
ATATGAAGTAACATTTTTGCAACAATAGAAGAAGTTCTGCCTTTTCTGGTTATAATCTTATTAC
TACTGAAACATGAATGGTCCTGGGAATCTGGCTCACTTTATAAGCAAAAAAATCAGTTTGATAG
CTTAATTTGGTTCAAGTTTATATCATCTGATAGCGTCCACATCAAGGAGATTTATTAGCACCAG
TTGAAGGATAAAATACATTAATAGTGAAGGAGGAAACCAATGCTCTTACCTTCTTAGAAATAAC
ATTACTCATTAACTTCTCCGAAAGTTGTACCTGAAATTACAAAGATAGTGAATAAGTTTGTGTA
TGTATGGAAATATATGATACAGTGATAGTGCAGTAAAAATGATTGGTAAATGGCAACTATTCAG
TTTTGCCTCATGTTGTTTAAGTCATCGGATAAGAATTGGACACCAGCATCAGGCAACGCCTGCC
CGTCACACATAATAAGAGTTTGGCTGTTAACATAAACGTTATACAGACCTTGTAAGCACATAAA
TCTGATGTCACATCAATAGTTTCTTCTATCTGAGGAGCATAAACATGCAAGTCTGAGTTCTTCG
AACAATGCATTTTTAAATGCTCAGTAGCTTCTGCTGATCCATGAACCAAAACCTGAAAATGTAA
CAGGAGCTTCAGTATGTGATGGCATGTTTACCCTCAAGAAATAAACGGAAATGTAAATAATTGT
ATTTGTAAATGGTTTCCATAGCTCAAGGGCATCAATAATAATCAGTAAATAGGTTTAGGGAATT
TCAAACTAATTTCTTGTTGAAAAGGGACAAGCTATATACGTGAGAAAAATATATGTTCCAAGAA
GGAGATAATCATGTGTCAAAAAGTATAAATTCTAAATCCTAAATCATGGATGCTAAAAGAAGGG
TATTTCCAGCACTTACAAGTTTTAATGGGGCCACATGAGCAATAACAGATTTTACAGAGCGCCC
ATCAGACCGACCTTCAAAGTCCATATATGCTAATGAACACTTGACTTGCACCTAAAAATGTTGA
TCATAATTAAATAGAAGTAAAGATTTTTCTAGAAATAAATAAACAGACAGACAAAATGAAGTAA
ATGGGAAAAAAAACTTACAGTCATCTCGTTGGAAATAACTTTTGAGGGTGTAGAATCAAGGAGT
AGGCGTGCTGAGCCCTCATCAAGCATACTATCCATACCATCCCCAGCACCCTGAAAACAATTCA
TGAAAACATTGACATTCAAGTTTATTTTGTTGGCATTTCAAGTTTTTTCAGGTTCCAAGAAAGA
AAACCCTAAACATAGTTGGCTGATATGCTCCAGGCAAAATTAAACCATCTGGCCACAGGGTTCC
GATTGTAAAAAAAAGAAAAAAAGTACATAAGCAAACTTACGGGCATCAAAGTATTATCCATTTC
TTCTTGCTTCATCAGATAGTCTTCAGGGTTGATAACCTCACCGAAGTCATCCCATTCAGAAGTA
TTTTCAAAGAAAGGAAACATTGGAGCAACACTTGATGATGGAGGGACAAATCCATCAATGAGAA
TATCCACATTCCCGCCAAACTTTGAACCAGCTGATGGAACCACAGAGCCAAGAAGGGTTGTTAA
CCACATATAATATATTGCATCAGATCGTAAAGGTCTTACAAACGCAGCCTAGCTATACCGTTGG
ATGGTTTGCGAGATGTGCTGGCATCAATAACCATGGGATCAGAAGCCTTTGCGTTTGATCCAAG
AGACGCCTTCTTTTCCTCCTCTTTGTTTAGACTGGCCTTTAGCGCTTCCTCCTTTTTTATCCGT
TCTTGTTCTTCTTCGTAAGCTTTCAGCTCATCACCAACTAAAGGAATTCGCTTGCTCATAGTGA
CCTTTACAGCTTTTGGAGGTGGATCTACTTGGAGCATGCGAGCTAGTGTCCCAAACTGGAATGG
GATACTTTGTAATTAGATAGCTGTAGAACATAGATATATGATGCTAGAATTCTTTTGCTGAGTG
AGAACAACACAAATGTTTGATCAGTTTTTGCAAATACAGAAATCTATGGAACATGAAGGCAGAG
AGGATATGGTTAACGTGACGTAAGTTTGGATTCATCATCAAGATTCATGTTGTTTACACAAATT
TTAAAAGTTTCATGTAGGTTGTAGCAATCAATTTGCTAAGGCCCCTTCAAGGTGTTGGACTACT
TGTCACTTACAGGTTTGAAGCTATAATGGTTTGTATGTAGCTAGTTATTGAATGTATGTGCTGA
GAAAGAAATAAACCATCCAGATATATTGAGTACATGGATTTACCTGTCCCTTCTCAGTAAAAAG
TACTAGATTCTTTGCTTCATTTGCCATATCAACAAATATGTCATGAGAAAAGCCAACCTCCAAG
CTTGCCATGGATGCTAGAACCACCTGCTAAATGTTTGTTAAATTCACGTTTCCGACAGTATGGA
GGAAATAAATGTTACTCTAACCTTTGGTGCATCTCCCAGCTTTTCAAGCTCATCTTTGTTTATT
ATCTGTGTAACACATCTGCAACACAGAAAAAACAAAAGTTGTAGAAACTAAACAAAACAATCAT
ACAAATATCGTTCTTAAGAAAGTTATATATGAAGTTTATAAACAAATAATAGTATAGCGCTGAT
TCAGGAAAAGAGGCAGTTGAATTGGCTCTGATAATACAGTATTGTAATAACAGGACAGCCCAAT
GAGATAAAATATAAATATGACTCCATAAGGAGAAAGTAATAGAGGAAACATGTCTATTGGGCTG
TTGAAATGTAAAATAATAAGCTCATCATGAATCTTCAGGCTTGCAATGCATAGCAATTGTCAAT
ATGCACAGAATAAAACAAAACGATGAACTGAAAAAAAGGAAAGTAACAAGAATCATTCGTACTT
TAATAGGAAGGCATTGTCTCTAGTGTGTTCAAAAGACTTTGAGATTGAATCATTCATCCATTCA
AGAAAACTCTTGACATAATCAACAGTACTCGTAGAAACATTTGTCAGAAAGTAGATAGGGTAGA
TCAAATGCCGTTGAGCCCAGTACTGCAATAAATCAAGACAAAAGGTGAACATATTATTGACATA
ACAAAATAAAACAGTACGAGAACAAGACCTTCAAGATTTCACCTGCTCCAATATCAAAAGAATT
TCAAGAACTCTACCAGCTGTATCAATCGGCAGTAACACACTACCACCACCAGTTAGAACTTTCA
CTAATGCATCTGCATGAAACAGGATGTCAATTAGACATCACAAGAGGATTCCCATACAGTAACT
AAAACAAACCATATACACGATAACATATATTTGGAGTCTAAAATATTAATAGTTTATTATTGAA
CTCAACAATGTGTAGCACTAAAAAATAATTGAGAAATAAAAAAAGTTGTGTCCAAGTTGCAAAT
TTGGAAAATAGAAGATATATTCATCAGTGCTACTTTGATGGAGAAAACATAAGTAAAAAACAGC
TTCCAACAAAATTATCATGAGCTGTTACCTGCAACCATGGCTGTGTGGGTATAGTAGTAATGCT
AGAGCTGAAAGCATTTGAAAAAGAGATAGAGATAGAGAGCTATGATAATAACATGTCCAGTGTT
GTACCAATGAAATCTTGATCCTGCTGCCTTTTGTAGACATGGTTGTTCAAGGCATTGTATGCAT
CAGTTATCAGAACAGCTGGCCGTACAAATGATCCAAGAGCAGTACCATTCAAATGCCTGGAAAA
GCACATTGCTGTTATTATTTGCTAATAAAGAGAAAACTAAAATGACAAGTAAATGACAAAGGAA
GGATTTAACCTCTCTTTACGATGGTTGAAGTCAACAGCATAAACAACATCCTCCCCATCTTTTG
TTATCTTCCATACCGTGCCACCCAAATCATGCCCAGCAACATGTGGAGCAATAACTATTCCTTC
ACCTTTATCTGCCAATCAATAGTATGTAAGGGGATGTAATTTAGCAAAGGATATACATCAACAG
CATGCTTACTGACCATTCAAAAGGTGGTTCTGTGAGTACTTCAATCTAACAACATTTTGGAATG
CAGCATCAATATCGTCCAAAGTAAACAAGTCAAAATCTGAAACTTGCTGCAAAGGAAAATAAAG
AATGGTTAGATCCACTATATGCAATGAAACAAACAAGAGGTTAAAATGGACACTAGAAAGCTTA
CCCGTCGTGATATAAAGTAATCATACAAGGTTAAAATGCCAAGTCTAAATACAGGTTCTGTGGC
ATATACTGGTGCAGATAGTCCGAGATGTTTCATAGCATATGGCAAAGCTCCTAGATGCATGGTA
TCGGCATGAGACAAAAGAACTGCATCTATTGTTGGTGCAACC
						
					

			
		

Sequences
Splice junction sequence	TGGTGCAGATAGTCCGAGATGTTTCATAGCATATGGCAAAGCTCCTAGATGCATGGTATCGGCA TGAGACAAAAGAACTGCATCTATTGTTGGTGCAACCctgcaaacctttatttgccaggaattgc ttaaaatcagccaatttcaaatcacccacaagaactgacttgtgggctgctggagttgacgacg ggggcaac
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTGCAAACCTTTATTTGCCAGGAATTGCTTAAAATCAGCCAATTTCAAATCACCCACAAGAACT GACTTGTGGGCTGCTGGAGTTGACGACGGGGGCAACAAAGTAAGCTTGTCATCTGTTTTTCCAA CCTCTGCATCTACCCATGCAATTTCATGCTCACCCAACTGCACAGAGTGCCAGTGTTAGTGCTT TCTTACTGCTAATCCATAACAACAAAGTGCAGTTTCAGGTTAGCCCCCAAAGGTTGTATACTTG TATGGGCAAAAAAAAAAATAATCACAGGCTTGTGGTATCAGGTTCACAGATAATTTTGTCATGA AAGGCTACTTATGCTGAAAAACATTCAACTGAGTAGGGCAACAGAATGGACCATCCAGTAAGCA GTATGGAATCAATCATTTCTCAAAACTGTATTGGAAGGACCTCGGTCATTCATATTCTTGTATG GGCAAAAAAAAAAAGAAATAATCACAGGCTTGTGGTATCTGGTTCACAGACAATTTTGTCATGA AAGGCTTCTTATGCTGAAAAACATTCGACTGACTAGGGCAACAGAATGGACCATCCAGTAACCA GTATGGAATCAATCATTTCTCAAAACTGCATTGGAAGGACCTCGGTCATTCATATACATATTGC ATATGAAGTAACATTTTTGCAACAATAGAAGAAGTTCTGCCTTTTCTGGTTATAATCTTATTAC TACTGAAACATGAATGGTCCTGGGAATCTGGCTCACTTTATAAGCAAAAAAATCAGTTTGATAG CTTAATTTGGTTCAAGTTTATATCATCTGATAGCGTCCACATCAAGGAGATTTATTAGCACCAG TTGAAGGATAAAATACATTAATAGTGAAGGAGGAAACCAATGCTCTTACCTTCTTAGAAATAAC ATTACTCATTAACTTCTCCGAAAGTTGTACCTGAAATTACAAAGATAGTGAATAAGTTTGTGTA TGTATGGAAATATATGATACAGTGATAGTGCAGTAAAAATGATTGGTAAATGGCAACTATTCAG TTTTGCCTCATGTTGTTTAAGTCATCGGATAAGAATTGGACACCAGCATCAGGCAACGCCTGCC CGTCACACATAATAAGAGTTTGGCTGTTAACATAAACGTTATACAGACCTTGTAAGCACATAAA TCTGATGTCACATCAATAGTTTCTTCTATCTGAGGAGCATAAACATGCAAGTCTGAGTTCTTCG AACAATGCATTTTTAAATGCTCAGTAGCTTCTGCTGATCCATGAACCAAAACCTGAAAATGTAA CAGGAGCTTCAGTATGTGATGGCATGTTTACCCTCAAGAAATAAACGGAAATGTAAATAATTGT ATTTGTAAATGGTTTCCATAGCTCAAGGGCATCAATAATAATCAGTAAATAGGTTTAGGGAATT TCAAACTAATTTCTTGTTGAAAAGGGACAAGCTATATACGTGAGAAAAATATATGTTCCAAGAA GGAGATAATCATGTGTCAAAAAGTATAAATTCTAAATCCTAAATCATGGATGCTAAAAGAAGGG TATTTCCAGCACTTACAAGTTTTAATGGGGCCACATGAGCAATAACAGATTTTACAGAGCGCCC ATCAGACCGACCTTCAAAGTCCATATATGCTAATGAACACTTGACTTGCACCTAAAAATGTTGA TCATAATTAAATAGAAGTAAAGATTTTTCTAGAAATAAATAAACAGACAGACAAAATGAAGTAA ATGGGAAAAAAAACTTACAGTCATCTCGTTGGAAATAACTTTTGAGGGTGTAGAATCAAGGAGT AGGCGTGCTGAGCCCTCATCAAGCATACTATCCATACCATCCCCAGCACCCTGAAAACAATTCA TGAAAACATTGACATTCAAGTTTATTTTGTTGGCATTTCAAGTTTTTTCAGGTTCCAAGAAAGA AAACCCTAAACATAGTTGGCTGATATGCTCCAGGCAAAATTAAACCATCTGGCCACAGGGTTCC GATTGTAAAAAAAAGAAAAAAAGTACATAAGCAAACTTACGGGCATCAAAGTATTATCCATTTC TTCTTGCTTCATCAGATAGTCTTCAGGGTTGATAACCTCACCGAAGTCATCCCATTCAGAAGTA TTTTCAAAGAAAGGAAACATTGGAGCAACACTTGATGATGGAGGGACAAATCCATCAATGAGAA TATCCACATTCCCGCCAAACTTTGAACCAGCTGATGGAACCACAGAGCCAAGAAGGGTTGTTAA CCACATATAATATATTGCATCAGATCGTAAAGGTCTTACAAACGCAGCCTAGCTATACCGTTGG ATGGTTTGCGAGATGTGCTGGCATCAATAACCATGGGATCAGAAGCCTTTGCGTTTGATCCAAG AGACGCCTTCTTTTCCTCCTCTTTGTTTAGACTGGCCTTTAGCGCTTCCTCCTTTTTTATCCGT TCTTGTTCTTCTTCGTAAGCTTTCAGCTCATCACCAACTAAAGGAATTCGCTTGCTCATAGTGA CCTTTACAGCTTTTGGAGGTGGATCTACTTGGAGCATGCGAGCTAGTGTCCCAAACTGGAATGG GATACTTTGTAATTAGATAGCTGTAGAACATAGATATATGATGCTAGAATTCTTTTGCTGAGTG AGAACAACACAAATGTTTGATCAGTTTTTGCAAATACAGAAATCTATGGAACATGAAGGCAGAG AGGATATGGTTAACGTGACGTAAGTTTGGATTCATCATCAAGATTCATGTTGTTTACACAAATT TTAAAAGTTTCATGTAGGTTGTAGCAATCAATTTGCTAAGGCCCCTTCAAGGTGTTGGACTACT TGTCACTTACAGGTTTGAAGCTATAATGGTTTGTATGTAGCTAGTTATTGAATGTATGTGCTGA GAAAGAAATAAACCATCCAGATATATTGAGTACATGGATTTACCTGTCCCTTCTCAGTAAAAAG TACTAGATTCTTTGCTTCATTTGCCATATCAACAAATATGTCATGAGAAAAGCCAACCTCCAAG CTTGCCATGGATGCTAGAACCACCTGCTAAATGTTTGTTAAATTCACGTTTCCGACAGTATGGA GGAAATAAATGTTACTCTAACCTTTGGTGCATCTCCCAGCTTTTCAAGCTCATCTTTGTTTATT ATCTGTGTAACACATCTGCAACACAGAAAAAACAAAAGTTGTAGAAACTAAACAAAACAATCAT ACAAATATCGTTCTTAAGAAAGTTATATATGAAGTTTATAAACAAATAATAGTATAGCGCTGAT TCAGGAAAAGAGGCAGTTGAATTGGCTCTGATAATACAGTATTGTAATAACAGGACAGCCCAAT GAGATAAAATATAAATATGACTCCATAAGGAGAAAGTAATAGAGGAAACATGTCTATTGGGCTG TTGAAATGTAAAATAATAAGCTCATCATGAATCTTCAGGCTTGCAATGCATAGCAATTGTCAAT ATGCACAGAATAAAACAAAACGATGAACTGAAAAAAAGGAAAGTAACAAGAATCATTCGTACTT TAATAGGAAGGCATTGTCTCTAGTGTGTTCAAAAGACTTTGAGATTGAATCATTCATCCATTCA AGAAAACTCTTGACATAATCAACAGTACTCGTAGAAACATTTGTCAGAAAGTAGATAGGGTAGA TCAAATGCCGTTGAGCCCAGTACTGCAATAAATCAAGACAAAAGGTGAACATATTATTGACATA ACAAAATAAAACAGTACGAGAACAAGACCTTCAAGATTTCACCTGCTCCAATATCAAAAGAATT TCAAGAACTCTACCAGCTGTATCAATCGGCAGTAACACACTACCACCACCAGTTAGAACTTTCA CTAATGCATCTGCATGAAACAGGATGTCAATTAGACATCACAAGAGGATTCCCATACAGTAACT AAAACAAACCATATACACGATAACATATATTTGGAGTCTAAAATATTAATAGTTTATTATTGAA CTCAACAATGTGTAGCACTAAAAAATAATTGAGAAATAAAAAAAGTTGTGTCCAAGTTGCAAAT TTGGAAAATAGAAGATATATTCATCAGTGCTACTTTGATGGAGAAAACATAAGTAAAAAACAGC TTCCAACAAAATTATCATGAGCTGTTACCTGCAACCATGGCTGTGTGGGTATAGTAGTAATGCT AGAGCTGAAAGCATTTGAAAAAGAGATAGAGATAGAGAGCTATGATAATAACATGTCCAGTGTT GTACCAATGAAATCTTGATCCTGCTGCCTTTTGTAGACATGGTTGTTCAAGGCATTGTATGCAT CAGTTATCAGAACAGCTGGCCGTACAAATGATCCAAGAGCAGTACCATTCAAATGCCTGGAAAA GCACATTGCTGTTATTATTTGCTAATAAAGAGAAAACTAAAATGACAAGTAAATGACAAAGGAA GGATTTAACCTCTCTTTACGATGGTTGAAGTCAACAGCATAAACAACATCCTCCCCATCTTTTG TTATCTTCCATACCGTGCCACCCAAATCATGCCCAGCAACATGTGGAGCAATAACTATTCCTTC ACCTTTATCTGCCAATCAATAGTATGTAAGGGGATGTAATTTAGCAAAGGATATACATCAACAG CATGCTTACTGACCATTCAAAAGGTGGTTCTGTGAGTACTTCAATCTAACAACATTTTGGAATG CAGCATCAATATCGTCCAAAGTAAACAAGTCAAAATCTGAAACTTGCTGCAAAGGAAAATAAAG AATGGTTAGATCCACTATATGCAATGAAACAAACAAGAGGTTAAAATGGACACTAGAAAGCTTA CCCGTCGTGATATAAAGTAATCATACAAGGTTAAAATGCCAAGTCTAAATACAGGTTCTGTGGC ATATACTGGTGCAGATAGTCCGAGATGTTTCATAGCATATGGCAAAGCTCCTAGATGCATGGTA TCGGCATGAGACAAAAGAACTGCATCTATTGTTGGTGCAACC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.112938288

Conservation Information
Conserved circRNAs	NA
PMCS	0.112938288

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							22726258-22721367(+)
22726242-22722478(+)
22726264-22726185(-)
						
						Potential amino acid sequence
						
							MHGIGMRQKNCIYCWCNPANLYLPGIA*(+)
MAKLLDAWYRHETKELHLLLVQPCKPLFARNCLKSANFKSPTRTDLWAAGVDDGGNKVSLSSVF
PTSASTHAISCSPNFLEITLLINFSESCTL*(+)
MHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDIDAAFQNVVRL
KYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKERHLNGTALGSFVR
PAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAGRVLEILLILEQYWAQRH
LIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLKCVTQIINKDELEKLGDAPK
VVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGTLARMLQVDPPPKAVKVTMSKRIPLV
GDELKAYEEEQERIKKEEALKASLNKEEEKKASLGSNAKASDPMVIDASTSRKPSNAGSKFGGN
VDILIDGFVPPSSSVAPMFPFFENTSEWDDFGEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLD
EGSARLLLDSTPSKVISNEMTVQVKCSLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEAT
EHLKMHCSKNSDLHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGK
TDDKLTLLPPSSTPAAHKSVLVGDLKLADFKQFLANKGLQGCTNNRCSSFVSCRYHASRSFAIC
YETSRTICTSICHRTCI*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	22726258-22721367(+) 22726242-22722478(+) 22726264-22726185(-)
Potential amino acid sequence	MHGIGMRQKNCIYCWCNPANLYLPGIA(+) MAKLLDAWYRHETKELHLLLVQPCKPLFARNCLKSANFKSPTRTDLWAAGVDDGGNKVSLSSVF PTSASTHAISCSPNFLEITLLINFSESCTL(+) MHLGALPYAMKHLGLSAPVYATEPVFRLGILTLYDYFISRRQVSDFDLFTLDDIDAAFQNVVRL KYSQNHLLNDKGEGIVIAPHVAGHDLGGTVWKITKDGEDVVYAVDFNHRKERHLNGTALGSFVR PAVLITDAYNALNNHVYKRQQDQDFIDALVKVLTGGGSVLLPIDTAGRVLEILLILEQYWAQRH LIYPIYFLTNVSTSTVDYVKSFLEWMNDSISKSFEHTRDNAFLLKCVTQIINKDELEKLGDAPK VVLASMASLEVGFSHDIFVDMANEAKNLVLFTEKGQFGTLARMLQVDPPPKAVKVTMSKRIPLV GDELKAYEEEQERIKKEEALKASLNKEEEKKASLGSNAKASDPMVIDASTSRKPSNAGSKFGGN VDILIDGFVPPSSSVAPMFPFFENTSEWDDFGEVINPEDYLMKQEEMDNTLMPGAGDGMDSMLD EGSARLLLDSTPSKVISNEMTVQVKCSLAYMDFEGRSDGRSVKSVIAHVAPLKLVLVHGSAEAT EHLKMHCSKNSDLHVYAPQIEETIDVTSDLCAYKVQLSEKLMSNVISKKLGEHEIAWVDAEVGK TDDKLTLLPPSSTPAAHKSVLVGDLKLADFKQFLANKGLQGCTNNRCSSFVSCRYHASRSFAIC YETSRTICTSICHRTCI*(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os09g0569400_circ_g.1

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