Plant Circular RNA Database

Detail information of Os09g0130800_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os09g0130800_circ_g.2
					
						ID in PlantcircBase
						osa_circ_038487
					
						Alias
						NA
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr9: 2355939-2359363  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer
					
						Parent gene
						
							Os09g0130800						
					
						Parent gene annotation
						
							Similar to predicted protein. (Os09t0130800-01);DEAD-like helica
se, N-terminal domain containing protein. (Os09t0130800-02);Simi
lar to predicted protein. (Os09t0130800-03);Similar to predicted
 protein. (Os09t0130800-04)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os09g0130800_circ_g.1 Os09g0130800_circ_g.3 						
					
						Support reads
						1
					
						Tissues
						root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os09t0130800-04:2
Os09t0130800-01:3
Os09t0130800-03:2
Os09t0130800-02:3

General Information
CircRNA Name	Os09g0130800_circ_g.2
ID in PlantcircBase	osa_circ_038487
Alias	NA
Organism	Oryza sativa
Position	chr9: 2355939-2359363 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer
Parent gene	Os09g0130800
Parent gene annotation	Similar to predicted protein. (Os09t0130800-01);DEAD-like helica se, N-terminal domain containing protein. (Os09t0130800-02);Simi lar to predicted protein. (Os09t0130800-03);Similar to predicted protein. (Os09t0130800-04)
Parent gene strand	-
Alternative splicing	Os09g0130800_circ_g.1 Os09g0130800_circ_g.3
Support reads	1
Tissues	root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os09t0130800-04:2 Os09t0130800-01:3 Os09t0130800-03:2 Os09t0130800-02:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CATGTCCTGATACAAACCATATCCCCAGGAGAGAGTGTGGTTGGAGGCAATCTATGGTTATCTT
TCACTCTAAATAGGACCAGATGCTGGCCATCCAACCcacattgtacaaggttcaaaacatgctg
tgaaactacatctgcctcgccattgttataaaaagatcctgtaccagcagggtctaaatgctcc
tcacagtc

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CACATTGTACAAGGTTCAAAACATGCTGTGAAACTACATCTGCCTCGCCATTGTTATAAAAAGA
TCCTGTACCAGCAGGGTCTAAATGCTCCTCACAGTCAATATTCAAACTTCCGTACGGCATACGA
GTGTCAAGTAAAAGAAAGGCACACCGAGTTATCCAAGTTTCCTGAAAGACGGTAATTTTAATCC
ATTATCAATATGATGCATACATTAATCAACCATAAAATATAATCAATCTTTTAAAACAAATGCA
ATTGTTTCTGGATAACAATTCGGACCTCCACACCTTTAATAGATGCATTTGTACCTACCTATTG
CAATGGATCTCAAATACATAAAACTTAAGTTATAAGGTTAAAAATGCCAAAATAATCATCCCTG
AATACAAAAAACTGCATACATGATTTGCATCAAATAAATCAGCCTCTGCATATACATTCATAGA
GGTTGTGTTCCTGTACCAAATTATTCCTACAAACAACACATATGTATACGTAGATCCAGAGAGG
AAACAACATTTGAGAGACTCCGTTATAAAGCAAGCCATGACCAACATCCATTTTAGTATAATTA
TTATGACCTAGAACATTTCGTAGTTACAGCCATGCAAAATTGTAATCAACATATGTCTCATATA
TCATCTCTTAGCTTCCATTTGGCAAGACTTATTTACACAAAAGGGGATTAAGCTCCAATTATAT
TGAAAGCAGTTCACATTATGTTGAATTCAAAACGGAGGAAGTCTTAGTATTGCCTACACTTTAA
GTCATATAGCAACAGAAAATCTCCATACAATTTATACCCTTCATCTTCATGCAAACTTAATTGT
GGTTCATGAAAATAAAATTGAAGTATGCTCATGAACAAGGGCATCACACAAACCATGTTCATTT
AGGCATGAAATCAACATGAAAAATTATGTAAAAATGGAACCAAACCCCAATTTAAACTATCAAC
AAGACCAGATACATTTTATGTAGAATAAAAAAATGAAATCCCTAAGAAACTAATATTAAAACTC
AAAAGGCATTGAAAATAAAAGGGCATTTCATCTTCATGCTTTTCGGCAACTGGCATGAGAAAAA
CTACCCCCTGCAAAATTCTGATAGGTTTATGGAAACAGGAACAGAGAGCATCAGTACCTTGATA
AATGGGTAATCAGCAAGAAGATGAGAAGCAACGGATGGGGAGGATTTGAGAAAACCATCATACA
TCTCGTTAGATGCCCAACTGGCAATTGAATCATGCATTCTGTATTGTGTTGTTAATTTCGTTGT
CAGTAGTTCATTATGCAACGATGAAGCTCTTTCGAGTAAAGACATTGCTAGTCCACCTTGCATA
GCCTCTCTTGATAAAACAACAGGTGCAAGCTGCCGTTGATCACCAGCAAGAATGCATCTTTTTC
CTTGTAAGATAGGGATCCAGCATGAGGGTTCGATTGCTTGTCCTGCTTCATCAATAATTACTAA
GTCAAAGCAACCAATCCTCCTCACAAGTGGGTCAGCTGCCCCAATATTAGTTGATAGGACAACA
TCAGCATTTGAAAGGACCTCTCTGATTATTTCCTTTTCCTTCTTTTTAAAGTTCTTCCCAAGCT
GCTTCAACAGTTGACGTATACCTGCGGCTAATGTATCATCCTGTATGCAATGCTTCAAGTCCTT
TCTCAAGTCGGATTTTTTCCTCTCGAACTCTTCTGTGAACTTCTGAAGTCTTCTGTTCACAAGC
TCTCCCAAGGACCTTGAAGCAACAGATGGAGATATCCTAGCAGGATTTCCAACTCGTACTGTGT
CCAGTCCAGTATCTGACAACTTCTCCACCATGTTATCAACTGCTGCATTGCTTGGAGCAGTTAC
GAGAACGCGTTCACCCTTTCGGACAGCACATGCAATGAGATAACTAAGCAAACCAGTCTTGCCC
GTGCCAGGAGGTCCTTGGATTATTAGGACAGGCCTTTTGTTGTTCAAGCCTAGTGTGATAGCTT
TTAACTGGGAGGCATCAAAGTCATATTTGTTCTTTTTCAATAGCTCATCATCATGTATTGTTGA
TTCTCCCCAATCAGCCAGATTATTCTGCTCCATCATCATCATGTCTTCCTTGTCCCCAAACAGA
GTGGCTACTACTCCAATGGAAGAATTCTTTTTCTGTAAACCTTTCCTTTGAAGAAGCATCAGTG
CTTCACAATTTCGCTGCCAAATCATACACAAACCAATAGGCTAAACGTTCAAGCTTTGTTCATC
CTTTTAGTAAAACTTGAAACAAAATCAACATATTTTCAACCTTGTAGGAAAGAATGAAATAATC
TGTGATCACAGAACACCTAACATTAGCCAGTCCAGTTTTCAACAAAAAAGTCCTGTCCTGATCA
CTTCTTCCATGCAAATATTTATGTTAGAAGCCAGTGTTTAGTTTCATCAGATTATGCAAATTTC
AAATTAAATTAAAAAATCCATAGTTTTCTACTCAGAAACTAGACCTAGCCCCAATTGCTAATAG
ACAATCATTTGTAACAAAATTCATTATACCACACCAACGTTAGCATGACACTCGCACAAGAAAA
TAAATACTGGATTGACACAAACAAAATTTAATTCAGACACAGCGGTAACCACTTACTTTTGGGG
ATACTGATTTTAATTTTTAAAACAGCAAGATCAGTAATAAACTAATTTATTTTTACATCTCAAT
TGTCTTCATACCTAGCATTCCTACATAACATATTTAGGTTTGATTTATCATATGCAGAAAGTTC
GGAACTTTAAGAATCCTTACCACTCCTTTTATAAACATGTAAGTTAGGTACCTAGGTTGCATAT
CATATACATATGATATATACATATGTATATGATATGTTGCATACATATGGCTCAAATTTTCGAA
AGGGTAATGTTGCATAGTATCAAGTATTAACAATTAAATGGTTTTGTTAGGCTAGGTGCCTAGG
TGCCTAAATTGCATTACCTCTTGAAAAAAGATTACTAACAATTAAATGGTATTGTATGGGGAAG
AAATTACTTTTAGCCTTTTAGGTCCAAACAGACTGATACTTCTGTGACATGGCTCAGAATGCTA
ACACCCATCTCATGCATCTAAAGGAAGGGATGCATGGGACTAGGGGTTACATCAACTAAATTGC
ATTACCTCATATGTAAGTGCGTCAGCCAATGCCTGAATCCTGTCAATCCGCACATTTTTCCCAA
AAAGCTTGGAGAACGTAGGATCACCACGGCGGGATTTCAGTGTCACGGTAATGCTGCAACCATC
CTCACCAAGATTATATATAAAGCCTTGCATGCAAGATGTGGTAATTTCCCCCCGGTTATCACAT
GTCCTGATACAAACCATATCCCCAGGAGAGAGTGTGGTTGGAGGCAATCTATGGTTATCTTTCA
CTCTAAATAGGACCAGATGCTGGCCATCCAACC
						
					

			
		

Sequences
Splice junction sequence	CATGTCCTGATACAAACCATATCCCCAGGAGAGAGTGTGGTTGGAGGCAATCTATGGTTATCTT TCACTCTAAATAGGACCAGATGCTGGCCATCCAACCcacattgtacaaggttcaaaacatgctg tgaaactacatctgcctcgccattgttataaaaagatcctgtaccagcagggtctaaatgctcc tcacagtc
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CACATTGTACAAGGTTCAAAACATGCTGTGAAACTACATCTGCCTCGCCATTGTTATAAAAAGA TCCTGTACCAGCAGGGTCTAAATGCTCCTCACAGTCAATATTCAAACTTCCGTACGGCATACGA GTGTCAAGTAAAAGAAAGGCACACCGAGTTATCCAAGTTTCCTGAAAGACGGTAATTTTAATCC ATTATCAATATGATGCATACATTAATCAACCATAAAATATAATCAATCTTTTAAAACAAATGCA ATTGTTTCTGGATAACAATTCGGACCTCCACACCTTTAATAGATGCATTTGTACCTACCTATTG CAATGGATCTCAAATACATAAAACTTAAGTTATAAGGTTAAAAATGCCAAAATAATCATCCCTG AATACAAAAAACTGCATACATGATTTGCATCAAATAAATCAGCCTCTGCATATACATTCATAGA GGTTGTGTTCCTGTACCAAATTATTCCTACAAACAACACATATGTATACGTAGATCCAGAGAGG AAACAACATTTGAGAGACTCCGTTATAAAGCAAGCCATGACCAACATCCATTTTAGTATAATTA TTATGACCTAGAACATTTCGTAGTTACAGCCATGCAAAATTGTAATCAACATATGTCTCATATA TCATCTCTTAGCTTCCATTTGGCAAGACTTATTTACACAAAAGGGGATTAAGCTCCAATTATAT TGAAAGCAGTTCACATTATGTTGAATTCAAAACGGAGGAAGTCTTAGTATTGCCTACACTTTAA GTCATATAGCAACAGAAAATCTCCATACAATTTATACCCTTCATCTTCATGCAAACTTAATTGT GGTTCATGAAAATAAAATTGAAGTATGCTCATGAACAAGGGCATCACACAAACCATGTTCATTT AGGCATGAAATCAACATGAAAAATTATGTAAAAATGGAACCAAACCCCAATTTAAACTATCAAC AAGACCAGATACATTTTATGTAGAATAAAAAAATGAAATCCCTAAGAAACTAATATTAAAACTC AAAAGGCATTGAAAATAAAAGGGCATTTCATCTTCATGCTTTTCGGCAACTGGCATGAGAAAAA CTACCCCCTGCAAAATTCTGATAGGTTTATGGAAACAGGAACAGAGAGCATCAGTACCTTGATA AATGGGTAATCAGCAAGAAGATGAGAAGCAACGGATGGGGAGGATTTGAGAAAACCATCATACA TCTCGTTAGATGCCCAACTGGCAATTGAATCATGCATTCTGTATTGTGTTGTTAATTTCGTTGT CAGTAGTTCATTATGCAACGATGAAGCTCTTTCGAGTAAAGACATTGCTAGTCCACCTTGCATA GCCTCTCTTGATAAAACAACAGGTGCAAGCTGCCGTTGATCACCAGCAAGAATGCATCTTTTTC CTTGTAAGATAGGGATCCAGCATGAGGGTTCGATTGCTTGTCCTGCTTCATCAATAATTACTAA GTCAAAGCAACCAATCCTCCTCACAAGTGGGTCAGCTGCCCCAATATTAGTTGATAGGACAACA TCAGCATTTGAAAGGACCTCTCTGATTATTTCCTTTTCCTTCTTTTTAAAGTTCTTCCCAAGCT GCTTCAACAGTTGACGTATACCTGCGGCTAATGTATCATCCTGTATGCAATGCTTCAAGTCCTT TCTCAAGTCGGATTTTTTCCTCTCGAACTCTTCTGTGAACTTCTGAAGTCTTCTGTTCACAAGC TCTCCCAAGGACCTTGAAGCAACAGATGGAGATATCCTAGCAGGATTTCCAACTCGTACTGTGT CCAGTCCAGTATCTGACAACTTCTCCACCATGTTATCAACTGCTGCATTGCTTGGAGCAGTTAC GAGAACGCGTTCACCCTTTCGGACAGCACATGCAATGAGATAACTAAGCAAACCAGTCTTGCCC GTGCCAGGAGGTCCTTGGATTATTAGGACAGGCCTTTTGTTGTTCAAGCCTAGTGTGATAGCTT TTAACTGGGAGGCATCAAAGTCATATTTGTTCTTTTTCAATAGCTCATCATCATGTATTGTTGA TTCTCCCCAATCAGCCAGATTATTCTGCTCCATCATCATCATGTCTTCCTTGTCCCCAAACAGA GTGGCTACTACTCCAATGGAAGAATTCTTTTTCTGTAAACCTTTCCTTTGAAGAAGCATCAGTG CTTCACAATTTCGCTGCCAAATCATACACAAACCAATAGGCTAAACGTTCAAGCTTTGTTCATC CTTTTAGTAAAACTTGAAACAAAATCAACATATTTTCAACCTTGTAGGAAAGAATGAAATAATC TGTGATCACAGAACACCTAACATTAGCCAGTCCAGTTTTCAACAAAAAAGTCCTGTCCTGATCA CTTCTTCCATGCAAATATTTATGTTAGAAGCCAGTGTTTAGTTTCATCAGATTATGCAAATTTC AAATTAAATTAAAAAATCCATAGTTTTCTACTCAGAAACTAGACCTAGCCCCAATTGCTAATAG ACAATCATTTGTAACAAAATTCATTATACCACACCAACGTTAGCATGACACTCGCACAAGAAAA TAAATACTGGATTGACACAAACAAAATTTAATTCAGACACAGCGGTAACCACTTACTTTTGGGG ATACTGATTTTAATTTTTAAAACAGCAAGATCAGTAATAAACTAATTTATTTTTACATCTCAAT TGTCTTCATACCTAGCATTCCTACATAACATATTTAGGTTTGATTTATCATATGCAGAAAGTTC GGAACTTTAAGAATCCTTACCACTCCTTTTATAAACATGTAAGTTAGGTACCTAGGTTGCATAT CATATACATATGATATATACATATGTATATGATATGTTGCATACATATGGCTCAAATTTTCGAA AGGGTAATGTTGCATAGTATCAAGTATTAACAATTAAATGGTTTTGTTAGGCTAGGTGCCTAGG TGCCTAAATTGCATTACCTCTTGAAAAAAGATTACTAACAATTAAATGGTATTGTATGGGGAAG AAATTACTTTTAGCCTTTTAGGTCCAAACAGACTGATACTTCTGTGACATGGCTCAGAATGCTA ACACCCATCTCATGCATCTAAAGGAAGGGATGCATGGGACTAGGGGTTACATCAACTAAATTGC ATTACCTCATATGTAAGTGCGTCAGCCAATGCCTGAATCCTGTCAATCCGCACATTTTTCCCAA AAAGCTTGGAGAACGTAGGATCACCACGGCGGGATTTCAGTGTCACGGTAATGCTGCAACCATC CTCACCAAGATTATATATAAAGCCTTGCATGCAAGATGTGGTAATTTCCCCCCGGTTATCACAT GTCCTGATACAAACCATATCCCCAGGAGAGAGTGTGGTTGGAGGCAATCTATGGTTATCTTTCA CTCTAAATAGGACCAGATGCTGGCCATCCAACC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_007951* 						
					
						PMCS
						0.145828594

Conservation Information
Conserved circRNAs	osi_circ_007951*
PMCS	0.145828594

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							2359190-2355994(+)
2359285-2355941(-)
						
					

						Potential amino acid sequence
						
							MLQPSSPRLYIKPCMQDVVISPRLSHVLIQTISPGESVVGGNLWLSFTLNRTRCWPSNPHCTRF
KTCCETTSASPLL*(+)
MVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADA
LTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNK
YDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMV
EKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTLA
AGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEP
SCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDS
IASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPA
GTGSFYNNGEADVVSQHVLNLVQCGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEI
TTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNCEALMLL
QRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDFDASQLKAITL
GLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRV
GNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKN
FKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCI
LAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGF
LKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADV
VSQHVLNLVQCGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLG
EDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIG
VVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQG
PPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASR
SLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVL
SNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVL
SREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLA
DYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGL
DGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSR
RGDPTFSKLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMM
MMEQNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYL
IACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKF
TEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGA
ADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSL
LERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRC
AFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQC(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	2359190-2355994(+) 2359285-2355941(-)
Potential amino acid sequence	MLQPSSPRLYIKPCMQDVVISPRLSHVLIQTISPGESVVGGNLWLSFTLNRTRCWPSNPHCTRF KTCCETTSASPLL*(+) MVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADA LTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNK YDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMV EKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTLA AGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEP SCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDS IASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPA GTGSFYNNGEADVVSQHVLNLVQCGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEI TTSCMQGFIYNLGEDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNCEALMLL QRKGLQKKNSSIGVVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDFDASQLKAITL GLNNKRPVLIIQGPPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRV GNPARISPSVASRSLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKN FKKKEKEIIREVLSNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCI LAGDQRQLAPVVLSREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGF LKSSPSVASHLLADYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADV VSQHVLNLVQCGLDGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLG EDGCSITVTLKSRRGDPTFSKLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIG VVATLFGDKEDMMMMEQNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQG PPGTGKTGLLSYLIACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASR SLGELVNRRLQKFTEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVL SNADVVLSTNIGAADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVL SREAMQGGLAMSLLERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLA DYPFIKETWITRCAFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQCGL DGQHLVLFRVKDNHRLPPTTLSPGDMVCIRTCDNRGEITTSCMQGFIYNLGEDGCSITVTLKSR RGDPTFSKLFGKNVRIDRIQALADALTYERNCEALMLLQRKGLQKKNSSIGVVATLFGDKEDMM MMEQNNLADWGESTIHDDELLKKNKYDFDASQLKAITLGLNNKRPVLIIQGPPGTGKTGLLSYL IACAVRKGERVLVTAPSNAAVDNMVEKLSDTGLDTVRVGNPARISPSVASRSLGELVNRRLQKF TEEFERKKSDLRKDLKHCIQDDTLAAGIRQLLKQLGKNFKKKEKEIIREVLSNADVVLSTNIGA ADPLVRRIGCFDLVIIDEAGQAIEPSCWIPILQGKRCILAGDQRQLAPVVLSREAMQGGLAMSL LERASSLHNELLTTKLTTQYRMHDSIASWASNEMYDGFLKSSPSVASHLLADYPFIKETWITRC AFLLLDTRMPYGSLNIDCEEHLDPAGTGSFYNNGEADVVSQHVLNLVQC(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Chu et al., 2017

circRNA

Detail information of Os09g0130800_circ_g.2

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