Detailed infomation of each circRNA
General Information | |
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CircRNA Name | BGIOSGA026242_circ_ag.1 |
ID in PlantcircBase | osi_circ_000918 |
Alias | NA |
Organism | Oryza sativa ssp. indica |
Position | chr7: 24752846-25058138 JBrowse» |
Reference genome | Oryza_indica.ASM465v1.42 |
Type | ag-circRNA |
Identification method | DCC |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | BGIOSGA026244_circ_g.1 BGIOSGA023829_circ_g.1 BGIOSGA026245_circ_g.1 BGIOSGA026249_circ_g.1 BGIOSGA026249_circ_g.2 BGIOSGA023819_circ_g.1 BGIOSGA023819_circ_g.2 BGIOSGA023819_circ_g.3 BGIOSGA023819_circ_g.4 BGIOSGA023819_circ_g.5 BGIOSGA023819_circ_g.6 BGIOSGA023819_circ_g.7 BGIOSGA023819_circ_g.8 BGIOSGA023817_circ_g.1 BGIOSGA026256_circ_g.1 BGIOSGA026256_circ_g.2 BGIOSGA026256_circ_igg.1 BGIOSGA026258_circ_g.1 BGIOSGA026258_circ_g.2 BGIOSGA026258_circ_g.3 BGIOSGA026258_circ_g.4 BGIOSGA026258_circ_g.5 |
Support reads | NA |
Tissues | leaf |
Exon boundary | NA-NA |
Splicing signals | AC-TG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | osa-miR5809 osa-miR5833 osa-miR2919 osa-miR2275c osa-miR2104 osa-miR2922 osa-miR5075 osa-miR419 osa-miR3979-5p |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Guria et al., 2019 |