Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT2G31660_circ_g.5 |
ID in PlantcircBase | ath_circ_015926 |
Alias | Ath_circ_FC1433 |
Organism | Arabidpsis thaliana |
Position | chr2: 13464919-13469218 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | CIRCexplorer, PcircRNA_finder |
Parent gene | AT2G31660 |
Parent gene annotation |
Importin beta-like SAD2 |
Parent gene strand | + |
Alternative splicing | AT2G31660_circ_g.2 AT2G31660_circ_g.3 AT2G31660_circ_g.4 AT2G31660_circ_g.6 AT2G31660_circ_g.7 AT2G31660_circ_g.8 AT2G31660_circ_g.9 AT2G31660_circ_g.10 AT2G31660_circ_g.11 AT2G31660_circ_g.12 AT2G31660_circ_g.13 AT2G31660_circ_g.14 |
Support reads | 2 |
Tissues | whole_plant |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT2G31660.1:14 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.121308936 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017;Chen et al., 2017a |