Plant Circular RNA Database

Detail information of Os02g0208600_circ_g.3

			
						 General Information
					
						CircRNA Name
						Os02g0208600_circ_g.3
					
						ID in PlantcircBase
						osa_circ_013764
					
						Alias
						Os02circ08129
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr2: 6084255-6087679  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRCexplorer, SMALT, Segemehl
					
						Parent gene
						
							Os02g0208600						
					
						Parent gene annotation
						
							Transcription elongation factor S-II, central region domain cont
aining protein. (Os02t0208600-01)
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Os02g0208600_circ_g.1 Os02g0208600_circ_g.2 Os02g0208600_circ_g.4 Os02g0208600_circ_g.5 						
					
						Support reads
						6/1
					
						Tissues
						leaf and panicle/shoot, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os02t0208600-01:2

General Information
CircRNA Name	Os02g0208600_circ_g.3
ID in PlantcircBase	osa_circ_013764
Alias	Os02circ08129
Organism	Oryza sativa
Position	chr2: 6084255-6087679 JBrowse»
Reference genome	IRGSP-1.0.38
Type	ue-circRNA
Identification method	CIRCexplorer, SMALT, Segemehl
Parent gene	Os02g0208600
Parent gene annotation	Transcription elongation factor S-II, central region domain cont aining protein. (Os02t0208600-01)
Parent gene strand	+
Alternative splicing	Os02g0208600_circ_g.1 Os02g0208600_circ_g.2 Os02g0208600_circ_g.4 Os02g0208600_circ_g.5
Support reads	6/1
Tissues	leaf and panicle/shoot, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os02t0208600-01:2

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							AGAATGGCGGAGCTTTGTTGAAATCAAGGGGAGAGTCAAACTTAGTGCCTTTCAAGAGTTTGTT
GAACAGCTTCCCAAATCTAGGAGCCGTGCTATAATGatatatgtattaactgttctaagcaaca
caactatttctcgtcaaggatcttgggagtttttgaaatagttgcataatggagttgtcaaatc
aagggcag

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2308
Transcript exons: 6084255-6086441,6087559-6087679
ATATATGTATTAACTGTTCTAAGCAACACAACTATTTCTCGTCAAGGATCTTGGGAGTTTTTGA
AATAGTTGCATAATGGAGTTGTCAAATCAAGGGCAGACACCCATGTCAACTAACATGGGTTCTC
AACCATTGCCTTCTTCAAATATTCAACCTAATCAGGCTGAGTATCCGTCTATGTTTTATCCATC
TTTGCCTGCTGACTGGGGTGCACAGCCAATGTTTTCTATGGGAGCTTCTGTTCCAATTAGTTCG
TATTTTATTGTTCCTATGAGTCAACAATCGGTCCAAATTGGTGCTTCTAGGCCAGAGACTCCGC
GTTCTTCAGGGGCACATTCTCTAAGCAGAGTATCATTGAGGCCACCCCAGCAAGTGCTAAGTAT
TCGAACATCTTTGCCAACAATGGTTGGATCACAACACTCTCCTGCTGGCAAGAAACTGCAACCG
ACAATTGCTTCTCCAAAGGTTCAAATACTGAAATCTACACAGTCACAGTCATCGAACAAACGTT
CTGCACAGAAGGAGACACCATCAAAGGTTCAAACTCAGCAATTGGAATCTGTGAGATCAAAGTT
CAGGGAGTCACTTTCTGCTGCTCTGAGAACAGATTCTGATCAGAGTAAGAATCAATCTTCTGAT
GTGCAGCCTGATGGGTCTGCAGACCAAAAGAAAGAGATGGATGTAGATGCAGATCAAGTGGCCA
CCACATCCCAAGGCATGAGTGCAGCCAAGTCGGAAGTATTGACAAGTGTTGGTGCTGAGAGGCG
TGCTGAAGATGAGAAGTTAAACAGTGATTTAGTTTCGAACATAGCCACACCATTAAACGCGGAC
ATCCAGCAACAACCAGAGAATGCTTCTTTACAAGATGAAATGTTGGGACAATATACAGTTGTTG
CTGATGAACTCTTGCAAGGTCATGGACTTTGTTGGGTTTCTGACTTTGATGCTGGGGTTCCTGA
ACCTGCCACACAACCTAATTTAAAAAGGTCCAGGGCTTCTGACATTGACCCTGTTGTTGCAGAC
ACTCTCTCAGAATCTGAGTCCAAAAGAATGAAGTCTGCCAATGATGAGGAAGCGATAGATAAGG
ATAGCATTATTCAGAAGGCAGATGATTTAGCAGTTAGGGTTGAAGAGGAGCTGTTCAAACTATT
TGGTGGAGTTAATAAGAAGTATAAGGAGAAAGGTAGATCTCTTCTATTTAATCTAAAAGATAAA
AGTAATCCTGAGTTAAGAGAGAGGGTATTGTCTGGAGATATTACACCTGATCGCCTCTGTTCAA
TGACTGCGGAGGAACTTGCTTCCAAGGAGCTATCGGAGTGGCGGTTAGCTAAAGCTGAAGAACT
AGCACAAATGGTTGTCCTTCCTAGTACCGAGGTTGATGTTAGACGTTTGGTTAGGAAAACACAC
AAAGGAGAATTTCAAGTTGAAGTAGAAGAAACAGATGGTATCTCAGTGGAGGTTGAGCTTGGAG
GTAATCTTCTTACTCAAGTTCCATCAAAAGCCCCTGAAGATCAGACCAAATCAGACGATAAAGA
AAGTACAGATGATAAAACAGGCATACAAGACAATGACAAGGCACCTGATGGGACTTCACAAGAT
GAAGATAATGGGGCAGGCAAGAACGATCCACAAGATGATTTAGAATATGTTGATAATGAGAAAA
GTGACCTTATGCAAGAACTTATGGTGGATGACTTGAAAGACACTGAAAACCTTCCACCGATCCC
TTCACTAGATGAATTCATGCAAGGTTTAGATTCTGAACCACCTTTTGAAAATCTCTCAGCTGGG
ACGCCAGAAGAAGATTCAGATGATCGAGACGAAGCTGACACTACTGCAGAATCTGCGGAACTTC
CTGAGGAAGAAGTTAAAGTTTCTGCAGCAGAGAAGATTGTATCTGAAGCTGACCTGCCATCTTC
GCAGGATAAATCTGAGTCCAAGTTAGAGTCACCCAAAGATGAGGTGGGTTCAAATTTGGGCCCT
GTTGAGCAGCGTGAAGGAAAGCTGATAAAATCCTCCCCAGATAGTGTTGAAGTCAAACAAACAA
CTACTGAAAATGTGCTGAATCGTGACTCTACTGTGCATAATATGGCAACTACTCTTCCTATGAT
ACGTGAAAGTATATGGGAGGGTGCAATTCAACTTACCATGTCTTCGCTCACAAATGTCGTTGCC
ATCTTCAAAAGTGGTGAAAAGCCACCAGTAAAAGAATGGCGGAGCTTTGTTGAAATCAAGGGGA
GAGTCAAACTTAGTGCCTTTCAAGAGTTTGTTGAACAGCTTCCCAAATCTAGGAGCCGTGCTAT
AATG
						
					

						Genomic sequence
						
							ATATATGTATTAACTGTTCTAAGCAACACAACTATTTCTCGTCAAGGATCTTGGGAGTTTTTGA
AATAGTTGCATAATGGAGTTGTCAAATCAAGGGCAGACACCCATGTCAACTAACATGGGTTCTC
AACCATTGCCTTCTTCAAATATTCAACCTAATCAGGCTGAGTATCCGTCTATGTTTTATCCATC
TTTGCCTGCTGACTGGGGTGCACAGCCAATGTTTTCTATGGGAGCTTCTGTTCCAATTAGTTCG
TATTTTATTGTTCCTATGAGTCAACAATCGGTCCAAATTGGTGCTTCTAGGCCAGAGACTCCGC
GTTCTTCAGGGGCACATTCTCTAAGCAGAGTATCATTGAGGCCACCCCAGCAAGTGCTAAGTAT
TCGAACATCTTTGCCAACAATGGTTGGATCACAACACTCTCCTGCTGGCAAGAAACTGCAACCG
ACAATTGCTTCTCCAAAGGTTCAAATACTGAAATCTACACAGTCACAGTCATCGAACAAACGTT
CTGCACAGAAGGAGACACCATCAAAGGTTCAAACTCAGCAATTGGAATCTGTGAGATCAAAGTT
CAGGGAGTCACTTTCTGCTGCTCTGAGAACAGATTCTGATCAGAGTAAGAATCAATCTTCTGAT
GTGCAGCCTGATGGGTCTGCAGACCAAAAGAAAGAGATGGATGTAGATGCAGATCAAGTGGCCA
CCACATCCCAAGGCATGAGTGCAGCCAAGTCGGAAGTATTGACAAGTGTTGGTGCTGAGAGGCG
TGCTGAAGATGAGAAGTTAAACAGTGATTTAGTTTCGAACATAGCCACACCATTAAACGCGGAC
ATCCAGCAACAACCAGAGAATGCTTCTTTACAAGATGAAATGTTGGGACAATATACAGTTGTTG
CTGATGAACTCTTGCAAGGTCATGGACTTTGTTGGGTTTCTGACTTTGATGCTGGGGTTCCTGA
ACCTGCCACACAACCTAATTTAAAAAGGTCCAGGGCTTCTGACATTGACCCTGTTGTTGCAGAC
ACTCTCTCAGAATCTGAGTCCAAAAGAATGAAGTCTGCCAATGATGAGGAAGCGATAGATAAGG
ATAGCATTATTCAGAAGGCAGATGATTTAGCAGTTAGGGTTGAAGAGGAGCTGTTCAAACTATT
TGGTGGAGTTAATAAGAAGTATAAGGAGAAAGGTAGATCTCTTCTATTTAATCTAAAAGATAAA
AGTAATCCTGAGTTAAGAGAGAGGGTATTGTCTGGAGATATTACACCTGATCGCCTCTGTTCAA
TGACTGCGGAGGAACTTGCTTCCAAGGAGCTATCGGAGTGGCGGTTAGCTAAAGCTGAAGAACT
AGCACAAATGGTTGTCCTTCCTAGTACCGAGGTTGATGTTAGACGTTTGGTTAGGAAAACACAC
AAAGGAGAATTTCAAGTTGAAGTAGAAGAAACAGATGGTATCTCAGTGGAGGTTGAGCTTGGAG
GTAATCTTCTTACTCAAGTTCCATCAAAAGCCCCTGAAGATCAGACCAAATCAGACGATAAAGA
AAGTACAGATGATAAAACAGGCATACAAGACAATGACAAGGCACCTGATGGGACTTCACAAGAT
GAAGATAATGGGGCAGGCAAGAACGATCCACAAGATGATTTAGAATATGTTGATAATGAGAAAA
GTGACCTTATGCAAGAACTTATGGTGGATGACTTGAAAGACACTGAAAACCTTCCACCGATCCC
TTCACTAGATGAATTCATGCAAGGTTTAGATTCTGAACCACCTTTTGAAAATCTCTCAGCTGGG
ACGCCAGAAGAAGATTCAGATGATCGAGACGAAGCTGACACTACTGCAGAATCTGCGGAACTTC
CTGAGGAAGAAGTTAAAGTTTCTGCAGCAGAGAAGATTGTATCTGAAGCTGACCTGCCATCTTC
GCAGGATAAATCTGAGTCCAAGTTAGAGTCACCCAAAGATGAGGTGGGTTCAAATTTGGGCCCT
GTTGAGCAGCGTGAAGGAAAGCTGATAAAATCCTCCCCAGATAGTGTTGAAGTCAAACAAACAA
CTACTGAAAATGTGCTGAATCGTGACTCTACTGTGCATAATATGGCAACTACTCTTCCTATGAT
ACGTGAAAGTATATGGGAGGGTGCAATTCAACTTACCATGTCTTCGCTCACAAATGTCGTTGCC
ATCTTCAAAAGGTTTGTTTCATCTGCAGCCTTTTCCTTTGAATTACCAATATACAATCGTTTCT
GTTAGCATACCATGATGATTTGACACATTCTCTTCGATGCCTTTGTCTTAGTTTTAATTTATTA
AAAGCAGATTAGTGCTTTACAGAACACGTACATCTTCTTTTGCACAAAGCTTTTACTGAACTGT
ATTCTGCAATTTCATCTTCTACATTGTATTCGCTTGGTCGTATTTTGGAAATTGATTGTCTGTT
CCTTCAGAAAGATACTTGTTGAACTATATGGCATATGCACTCCTTGGCAAAACACACACACAAC
TTGCATATGTCCAAGACTCGTATGATAACTTTATTTATTTATACTCCAACTATTCTGTCCTGGT
CTTAAGCTTGAGTAAGAATGATAAGTTTGGGAGGCAATAAAAGCATAAATCGCCATCACTGGTC
ATTAAGTAAGGGTCAATGAAATTGGGGGGCTTTCGTTGAAGATCTCAGTTCTTTCGCGCCTCAG
GCAAGTGAGTTATGGAAGTCTTTCTTCCTCATCTGGTGAAGCTAGCTGCTGTTGTTTGATTCCT
TGTTTCTATTGGTTTCTCAAGAGGCTCAAGGTCTTGCTCTACCTAAATTACTTTAGGTTTAGAA
GCTAGACATCTAGCATCAAATTAAGTAATAAGTAAAAACTGATAGCTCATGGCATGCAAGTATA
TAAATATATCTTCATGTGAGAACTGCTAAGAGTAATAATTTATAATTAGCAAGCACTGCCAAAT
GTGACATGCTTCAGTGTACTTCTCTTGATTCCGCAGAGAGTGCATTAAGTAGGTGTATGTCATT
GAGGGTCCAGCTTGGCTACTTCACCTCTTTCTGATGGGAACTTGTATACTTGTGTATTTGTTCG
ATTTATGTCTTGTTAGTTAATACTGATCTAAATCATCCCTTTTGCAAAGTTTGCTGATTTAATT
AATGTTGATAACAATTTACAACTGGTTCTTCATTGTTGTGGCCCAGAATGCCCTGCTACTGTCC
AAGTACACATGATCCACTCTACCTGAAAGATAGTGTTGATATGTGTTTATTCTGTATTTTATTT
TTGTATTTGTGATGACATGTATTAAAATTTCACTTTGCAGTGGTGAAAAGCCACCAGTAAAAGA
ATGGCGGAGCTTTGTTGAAATCAAGGGGAGAGTCAAACTTAGTGCCTTTCAAGAGTTTGTTGAA
CAGCTTCCCAAATCTAGGAGCCGTGCTATAATG
						
					

			
		

Sequences
Splice junction sequence	AGAATGGCGGAGCTTTGTTGAAATCAAGGGGAGAGTCAAACTTAGTGCCTTTCAAGAGTTTGTT GAACAGCTTCCCAAATCTAGGAGCCGTGCTATAATGatatatgtattaactgttctaagcaaca caactatttctcgtcaaggatcttgggagtttttgaaatagttgcataatggagttgtcaaatc aagggcag
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2308 Transcript exons: 6084255-6086441,6087559-6087679 ATATATGTATTAACTGTTCTAAGCAACACAACTATTTCTCGTCAAGGATCTTGGGAGTTTTTGA AATAGTTGCATAATGGAGTTGTCAAATCAAGGGCAGACACCCATGTCAACTAACATGGGTTCTC AACCATTGCCTTCTTCAAATATTCAACCTAATCAGGCTGAGTATCCGTCTATGTTTTATCCATC TTTGCCTGCTGACTGGGGTGCACAGCCAATGTTTTCTATGGGAGCTTCTGTTCCAATTAGTTCG TATTTTATTGTTCCTATGAGTCAACAATCGGTCCAAATTGGTGCTTCTAGGCCAGAGACTCCGC GTTCTTCAGGGGCACATTCTCTAAGCAGAGTATCATTGAGGCCACCCCAGCAAGTGCTAAGTAT TCGAACATCTTTGCCAACAATGGTTGGATCACAACACTCTCCTGCTGGCAAGAAACTGCAACCG ACAATTGCTTCTCCAAAGGTTCAAATACTGAAATCTACACAGTCACAGTCATCGAACAAACGTT CTGCACAGAAGGAGACACCATCAAAGGTTCAAACTCAGCAATTGGAATCTGTGAGATCAAAGTT CAGGGAGTCACTTTCTGCTGCTCTGAGAACAGATTCTGATCAGAGTAAGAATCAATCTTCTGAT GTGCAGCCTGATGGGTCTGCAGACCAAAAGAAAGAGATGGATGTAGATGCAGATCAAGTGGCCA CCACATCCCAAGGCATGAGTGCAGCCAAGTCGGAAGTATTGACAAGTGTTGGTGCTGAGAGGCG TGCTGAAGATGAGAAGTTAAACAGTGATTTAGTTTCGAACATAGCCACACCATTAAACGCGGAC ATCCAGCAACAACCAGAGAATGCTTCTTTACAAGATGAAATGTTGGGACAATATACAGTTGTTG CTGATGAACTCTTGCAAGGTCATGGACTTTGTTGGGTTTCTGACTTTGATGCTGGGGTTCCTGA ACCTGCCACACAACCTAATTTAAAAAGGTCCAGGGCTTCTGACATTGACCCTGTTGTTGCAGAC ACTCTCTCAGAATCTGAGTCCAAAAGAATGAAGTCTGCCAATGATGAGGAAGCGATAGATAAGG ATAGCATTATTCAGAAGGCAGATGATTTAGCAGTTAGGGTTGAAGAGGAGCTGTTCAAACTATT TGGTGGAGTTAATAAGAAGTATAAGGAGAAAGGTAGATCTCTTCTATTTAATCTAAAAGATAAA AGTAATCCTGAGTTAAGAGAGAGGGTATTGTCTGGAGATATTACACCTGATCGCCTCTGTTCAA TGACTGCGGAGGAACTTGCTTCCAAGGAGCTATCGGAGTGGCGGTTAGCTAAAGCTGAAGAACT AGCACAAATGGTTGTCCTTCCTAGTACCGAGGTTGATGTTAGACGTTTGGTTAGGAAAACACAC AAAGGAGAATTTCAAGTTGAAGTAGAAGAAACAGATGGTATCTCAGTGGAGGTTGAGCTTGGAG GTAATCTTCTTACTCAAGTTCCATCAAAAGCCCCTGAAGATCAGACCAAATCAGACGATAAAGA AAGTACAGATGATAAAACAGGCATACAAGACAATGACAAGGCACCTGATGGGACTTCACAAGAT GAAGATAATGGGGCAGGCAAGAACGATCCACAAGATGATTTAGAATATGTTGATAATGAGAAAA GTGACCTTATGCAAGAACTTATGGTGGATGACTTGAAAGACACTGAAAACCTTCCACCGATCCC TTCACTAGATGAATTCATGCAAGGTTTAGATTCTGAACCACCTTTTGAAAATCTCTCAGCTGGG ACGCCAGAAGAAGATTCAGATGATCGAGACGAAGCTGACACTACTGCAGAATCTGCGGAACTTC CTGAGGAAGAAGTTAAAGTTTCTGCAGCAGAGAAGATTGTATCTGAAGCTGACCTGCCATCTTC GCAGGATAAATCTGAGTCCAAGTTAGAGTCACCCAAAGATGAGGTGGGTTCAAATTTGGGCCCT GTTGAGCAGCGTGAAGGAAAGCTGATAAAATCCTCCCCAGATAGTGTTGAAGTCAAACAAACAA CTACTGAAAATGTGCTGAATCGTGACTCTACTGTGCATAATATGGCAACTACTCTTCCTATGAT ACGTGAAAGTATATGGGAGGGTGCAATTCAACTTACCATGTCTTCGCTCACAAATGTCGTTGCC ATCTTCAAAAGTGGTGAAAAGCCACCAGTAAAAGAATGGCGGAGCTTTGTTGAAATCAAGGGGA GAGTCAAACTTAGTGCCTTTCAAGAGTTTGTTGAACAGCTTCCCAAATCTAGGAGCCGTGCTAT AATG
Genomic sequence	ATATATGTATTAACTGTTCTAAGCAACACAACTATTTCTCGTCAAGGATCTTGGGAGTTTTTGA AATAGTTGCATAATGGAGTTGTCAAATCAAGGGCAGACACCCATGTCAACTAACATGGGTTCTC AACCATTGCCTTCTTCAAATATTCAACCTAATCAGGCTGAGTATCCGTCTATGTTTTATCCATC TTTGCCTGCTGACTGGGGTGCACAGCCAATGTTTTCTATGGGAGCTTCTGTTCCAATTAGTTCG TATTTTATTGTTCCTATGAGTCAACAATCGGTCCAAATTGGTGCTTCTAGGCCAGAGACTCCGC GTTCTTCAGGGGCACATTCTCTAAGCAGAGTATCATTGAGGCCACCCCAGCAAGTGCTAAGTAT TCGAACATCTTTGCCAACAATGGTTGGATCACAACACTCTCCTGCTGGCAAGAAACTGCAACCG ACAATTGCTTCTCCAAAGGTTCAAATACTGAAATCTACACAGTCACAGTCATCGAACAAACGTT CTGCACAGAAGGAGACACCATCAAAGGTTCAAACTCAGCAATTGGAATCTGTGAGATCAAAGTT CAGGGAGTCACTTTCTGCTGCTCTGAGAACAGATTCTGATCAGAGTAAGAATCAATCTTCTGAT GTGCAGCCTGATGGGTCTGCAGACCAAAAGAAAGAGATGGATGTAGATGCAGATCAAGTGGCCA CCACATCCCAAGGCATGAGTGCAGCCAAGTCGGAAGTATTGACAAGTGTTGGTGCTGAGAGGCG TGCTGAAGATGAGAAGTTAAACAGTGATTTAGTTTCGAACATAGCCACACCATTAAACGCGGAC ATCCAGCAACAACCAGAGAATGCTTCTTTACAAGATGAAATGTTGGGACAATATACAGTTGTTG CTGATGAACTCTTGCAAGGTCATGGACTTTGTTGGGTTTCTGACTTTGATGCTGGGGTTCCTGA ACCTGCCACACAACCTAATTTAAAAAGGTCCAGGGCTTCTGACATTGACCCTGTTGTTGCAGAC ACTCTCTCAGAATCTGAGTCCAAAAGAATGAAGTCTGCCAATGATGAGGAAGCGATAGATAAGG ATAGCATTATTCAGAAGGCAGATGATTTAGCAGTTAGGGTTGAAGAGGAGCTGTTCAAACTATT TGGTGGAGTTAATAAGAAGTATAAGGAGAAAGGTAGATCTCTTCTATTTAATCTAAAAGATAAA AGTAATCCTGAGTTAAGAGAGAGGGTATTGTCTGGAGATATTACACCTGATCGCCTCTGTTCAA TGACTGCGGAGGAACTTGCTTCCAAGGAGCTATCGGAGTGGCGGTTAGCTAAAGCTGAAGAACT AGCACAAATGGTTGTCCTTCCTAGTACCGAGGTTGATGTTAGACGTTTGGTTAGGAAAACACAC AAAGGAGAATTTCAAGTTGAAGTAGAAGAAACAGATGGTATCTCAGTGGAGGTTGAGCTTGGAG GTAATCTTCTTACTCAAGTTCCATCAAAAGCCCCTGAAGATCAGACCAAATCAGACGATAAAGA AAGTACAGATGATAAAACAGGCATACAAGACAATGACAAGGCACCTGATGGGACTTCACAAGAT GAAGATAATGGGGCAGGCAAGAACGATCCACAAGATGATTTAGAATATGTTGATAATGAGAAAA GTGACCTTATGCAAGAACTTATGGTGGATGACTTGAAAGACACTGAAAACCTTCCACCGATCCC TTCACTAGATGAATTCATGCAAGGTTTAGATTCTGAACCACCTTTTGAAAATCTCTCAGCTGGG ACGCCAGAAGAAGATTCAGATGATCGAGACGAAGCTGACACTACTGCAGAATCTGCGGAACTTC CTGAGGAAGAAGTTAAAGTTTCTGCAGCAGAGAAGATTGTATCTGAAGCTGACCTGCCATCTTC GCAGGATAAATCTGAGTCCAAGTTAGAGTCACCCAAAGATGAGGTGGGTTCAAATTTGGGCCCT GTTGAGCAGCGTGAAGGAAAGCTGATAAAATCCTCCCCAGATAGTGTTGAAGTCAAACAAACAA CTACTGAAAATGTGCTGAATCGTGACTCTACTGTGCATAATATGGCAACTACTCTTCCTATGAT ACGTGAAAGTATATGGGAGGGTGCAATTCAACTTACCATGTCTTCGCTCACAAATGTCGTTGCC ATCTTCAAAAGGTTTGTTTCATCTGCAGCCTTTTCCTTTGAATTACCAATATACAATCGTTTCT GTTAGCATACCATGATGATTTGACACATTCTCTTCGATGCCTTTGTCTTAGTTTTAATTTATTA AAAGCAGATTAGTGCTTTACAGAACACGTACATCTTCTTTTGCACAAAGCTTTTACTGAACTGT ATTCTGCAATTTCATCTTCTACATTGTATTCGCTTGGTCGTATTTTGGAAATTGATTGTCTGTT CCTTCAGAAAGATACTTGTTGAACTATATGGCATATGCACTCCTTGGCAAAACACACACACAAC TTGCATATGTCCAAGACTCGTATGATAACTTTATTTATTTATACTCCAACTATTCTGTCCTGGT CTTAAGCTTGAGTAAGAATGATAAGTTTGGGAGGCAATAAAAGCATAAATCGCCATCACTGGTC ATTAAGTAAGGGTCAATGAAATTGGGGGGCTTTCGTTGAAGATCTCAGTTCTTTCGCGCCTCAG GCAAGTGAGTTATGGAAGTCTTTCTTCCTCATCTGGTGAAGCTAGCTGCTGTTGTTTGATTCCT TGTTTCTATTGGTTTCTCAAGAGGCTCAAGGTCTTGCTCTACCTAAATTACTTTAGGTTTAGAA GCTAGACATCTAGCATCAAATTAAGTAATAAGTAAAAACTGATAGCTCATGGCATGCAAGTATA TAAATATATCTTCATGTGAGAACTGCTAAGAGTAATAATTTATAATTAGCAAGCACTGCCAAAT GTGACATGCTTCAGTGTACTTCTCTTGATTCCGCAGAGAGTGCATTAAGTAGGTGTATGTCATT GAGGGTCCAGCTTGGCTACTTCACCTCTTTCTGATGGGAACTTGTATACTTGTGTATTTGTTCG ATTTATGTCTTGTTAGTTAATACTGATCTAAATCATCCCTTTTGCAAAGTTTGCTGATTTAATT AATGTTGATAACAATTTACAACTGGTTCTTCATTGTTGTGGCCCAGAATGCCCTGCTACTGTCC AAGTACACATGATCCACTCTACCTGAAAGATAGTGTTGATATGTGTTTATTCTGTATTTTATTT TTGTATTTGTGATGACATGTATTAAAATTTCACTTTGCAGTGGTGAAAAGCCACCAGTAAAAGA ATGGCGGAGCTTTGTTGAAATCAAGGGGAGAGTCAAACTTAGTGCCTTTCAAGAGTTTGTTGAA CAGCTTCCCAAATCTAGGAGCCGTGCTATAATG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.355881809

Conservation Information
Conserved circRNAs	NA
PMCS	0.355881809

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							6084332-6084320(+)
						
						Potential amino acid sequence
						
							MELSNQGQTPMSTNMGSQPLPSSNIQPNQAEYPSMFYPSLPADWGAQPMFSMGASVPISSYFIV
PMSQQSVQIGASRPETPRSSGAHSLSRVSLRPPQQVLSIRTSLPTMVGSQHSPAGKKLQPTIAS
PKVQILKSTQSQSSNKRSAQKETPSKVQTQQLESVRSKFRESLSAALRTDSDQSKNQSSDVQPD
GSADQKKEMDVDADQVATTSQGMSAAKSEVLTSVGAERRAEDEKLNSDLVSNIATPLNADIQQQ
PENASLQDEMLGQYTVVADELLQGHGLCWVSDFDAGVPEPATQPNLKRSRASDIDPVVADTLSE
SESKRMKSANDEEAIDKDSIIQKADDLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE
LRERVLSGDITPDRLCSMTAEELASKELSEWRLAKAEELAQMVVLPSTEVDVRRLVRKTHKGEF
QVEVEETDGISVEVELGGNLLTQVPSKAPEDQTKSDDKESTDDKTGIQDNDKAPDGTSQDEDNG
AGKNDPQDDLEYVDNEKSDLMQELMVDDLKDTENLPPIPSLDEFMQGLDSEPPFENLSAGTPEE
DSDDRDEADTTAESAELPEEEVKVSAAEKIVSEADLPSSQDKSESKLESPKDEVGSNLGPVEQR
EGKLIKSSPDSVEVKQTTTENVLNRDSTVHNMATTLPMIRESIWEGAIQLTMSSLTNVVAIFKS
GEKPPVKEWRSFVEIKGRVKLSAFQEFVEQLPKSRSRAIMIYVLTVLSNTTISRQGSWEFLK*(
+)
						
						Sponge-miRNAs
						
							osa-miR5512a 						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	6084332-6084320(+)
Potential amino acid sequence	MELSNQGQTPMSTNMGSQPLPSSNIQPNQAEYPSMFYPSLPADWGAQPMFSMGASVPISSYFIV PMSQQSVQIGASRPETPRSSGAHSLSRVSLRPPQQVLSIRTSLPTMVGSQHSPAGKKLQPTIAS PKVQILKSTQSQSSNKRSAQKETPSKVQTQQLESVRSKFRESLSAALRTDSDQSKNQSSDVQPD GSADQKKEMDVDADQVATTSQGMSAAKSEVLTSVGAERRAEDEKLNSDLVSNIATPLNADIQQQ PENASLQDEMLGQYTVVADELLQGHGLCWVSDFDAGVPEPATQPNLKRSRASDIDPVVADTLSE SESKRMKSANDEEAIDKDSIIQKADDLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE LRERVLSGDITPDRLCSMTAEELASKELSEWRLAKAEELAQMVVLPSTEVDVRRLVRKTHKGEF QVEVEETDGISVEVELGGNLLTQVPSKAPEDQTKSDDKESTDDKTGIQDNDKAPDGTSQDEDNG AGKNDPQDDLEYVDNEKSDLMQELMVDDLKDTENLPPIPSLDEFMQGLDSEPPFENLSAGTPEE DSDDRDEADTTAESAELPEEEVKVSAAEKIVSEADLPSSQDKSESKLESPKDEVGSNLGPVEQR EGKLIKSSPDSVEVKQTTTENVLNRDSTVHNMATTLPMIRESIWEGAIQLTMSSLTNVVAIFKS GEKPPVKEWRSFVEIKGRVKLSAFQEFVEQLPKSRSRAIMIYVLTVLSNTTISRQGSWEFLK*( +)
Sponge-miRNAs	osa-miR5512a
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Lu et al., 2015;Chu et al., 2017

circRNA

Detail information of Os02g0208600_circ_g.3

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