Plant Circular RNA Database

Detail information of BGIOSGA010705_circ_g.1

			
						 General Information
					
						CircRNA Name
						BGIOSGA010705_circ_g.1
					
						ID in PlantcircBase
						osi_circ_004835
					
						Alias
						3:15295247|15298840
					
						Organism
						
							Oryza sativa ssp. indica						
					
						Position
						
							chr3: 15295247-15298840  JBrowse»						
					
						Reference genome
						
							Oryza_indica.ASM465v1.42						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ
					
						Parent gene
						
							BGIOSGA010705						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						-
					
						Alternative splicing
						
							BGIOSGA010705_circ_g.2 						
					
						Support reads
						NA
					
						Tissues
						leaf
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						BGIOSGA010705-TA:3

General Information
CircRNA Name	BGIOSGA010705_circ_g.1
ID in PlantcircBase	osi_circ_004835
Alias	3:15295247\|15298840
Organism	Oryza sativa ssp. indica
Position	chr3: 15295247-15298840 JBrowse»
Reference genome	Oryza_indica.ASM465v1.42
Type	e-circRNA
Identification method	find_circ
Parent gene	BGIOSGA010705
Parent gene annotation	NA
Parent gene strand	-
Alternative splicing	BGIOSGA010705_circ_g.2
Support reads	NA
Tissues	leaf
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	BGIOSGA010705-TA:3

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TGCCCTCACAAAATCAGATCCTTTTCCCTGTCGCTTAGCAAGTAGAGACCTTCGTTTCTCTTCA
GTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCActctccagcgatgccatgtttggcacac
tcaattgcaagacgtgttgcacgcgctatattttcttttgttcttgtcagtgtaccaagaaaag
atccaaaa

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							CTCTCCAGCGATGCCATGTTTGGCACACTCAATTGCAAGACGTGTTGCACGCGCTATATTTTCT
TTTGTTCTTGTCAGTGTACCAAGAAAAGATCCAAAAGCCTTTCGTGCTGCATTAGCCTCATCAT
GTCCTGTTAATTTGCTCAAGTTCTTCTGTTGCTGACTATCAAAAGGACTCCTAGAATGAATATT
ATCATTTGTAGATGTGGATCTGATTATCCGGTTCAAAGGTGACAATTGCTTCTGTGATCCTTCC
TTGAAAGCAGGTGTATCAACTACAGTTTCAGGAATATACTTGGCATTCAGAAAGTTATCTGGAA
AAGAAGTTGATCGAGAGAACCTTCTAGCTTGTGCAACAGCAATAAGTTCTTTCATAGGCATTGA
ATCTGGAGAAGTGCTCTTATCCTTTAGGTTTCTATGGTTCAGTTCTTTTAATGCCAAAGCTGAG
AAGGTGTGCCTGCAATACAACAATAAGTATTGTCATGCCTTTTCAGAAGACCATCTTAAATCAA
CTAATCAAGTATCAAATTTGTATCAAATTTATAAAGTACTAATCCAGAGTTGTTATAGGAGTAA
TTCAAAGGTACAATATAAACCAAAAAAGTTGCTATTCCAGGCATTCTACATGAATAGGTCATAA
GTTCATCAGACTGTACGTTGCAAAATAAGCATTCCTGCTAAGAAGGTTCAAAAGGTGTAGAGCT
CAATGTATAGATTTCAGACATGAACCATAAGAATGATGTTTCCATTGGGACCTAAATATTGCTC
TCCAGTCTCCACTGGCTAGTAATGTCAGGCTCCAAAAATAGGCTCTATAGTTAAAGCCAAAATA
GAGCAGACAAATAAATTAGAGACGTATGGAGGTAGAAAACGGTCCCGATTAATTCTCCTTAATA
AAGGATTGTGAAGGAACTGAAATATCCCACAAAACATATATTAGGATCCACAAGCCCATAACAT
GGAAAGATTTAGAATCTATATGATATAACTAAAGACAGGAGCATTAGAATAATAAGATCCTTGT
TGATGAGTAAAACAAGATAACCATTCATGCCATTTATCCAGATTCCAGAGTGAATCAATTTGCC
CACCTTTTTTGTTCAGTCAACTAGATTATGAAGTGTTACCTATGTTTAAGACATACATTGACCC
ATTATTGAGTCTCCAAAGAAATGCATTTTGATGGATGAAAACATCAGGTTGACATTACAAGGAA
AAGAATTTCGTAGGAAAAGAAAAATCAAATTGCATGGATGCTTCTTCTTCACAACTTTCTGAAG
TTTCAATCAGAAAATGCCAGCATAAATTTGGAAAAGAAGCATGCATGTCCTAAATTTGTCACAA
AAAGGTTATGAACAAGAAGATATGGAGCATATAATGATAAACAAATATCTCATGCAGACATAAT
GGAAGATACAATTTGGCATGAAAGCTTACACTTCAAATGTCCGGGTGTCTGCATCAGATTGTAT
ACTGGAAGATTTAGTGGCCAGCGAAGAGGTGCTTGCTGTATCAGCCACATTGACTACTGTTTCA
GCTACAACAGTTTCATTATGCAGTACAGAATCACTGATCGCATTATTGTTAGAAGAAAGCAACT
TTGGTCGGTAAATTGGCTCATCACATCTTTGAACACTTCTGTCAGTATCATATGCAGGACGGTC
AACTGGTTTTGGGCCTTCATTGAAGTTGATTGGTTTGGCAACCTCGCTAACACTAGCTGTCCCC
AAAGATGAAGATAAACGATCAGGTACAGCTACAGTCTGTGTACCACCAAGAGCAGACTCATTCA
GCTTCATTGAAAGAGCCAAGCCTTTCCCGCAGTCGTCATTGCCAACTTCACTAGAGACCAACAA
GCAATCAGTAGTTTTGCTATCAACGTGAGTTTCTTCACAAATATTGCCTTCTGTAACATGACTG
TCATCTTTTGCTTCTGAAGGAACTGAAGCAGAAGCAGGAACACTGTTATTTTGCAGAATTGATT
CTGAGGAGTGTGTTTTGCACTTTGGGCTATGCATGGATTCTGTGCACAAAGATGGCCTAGGGCT
TTCTGCTATTGCAGATCCGTTAGTGGCTGTGACTACTGCATCTGCAGATTTATTAGAGTGGCTG
TTTTCTGAAGCCACAAAACCATTTGGAATCAATTGCTTTGACCCTGTCACTTCAGGCAGATTAT
TAGTTTCAGCAACATTAGCGGACATAGCTTCTAAGGCACGATGAAGACGTTTTGATGGAGGCAA
AGCAGCTTCAACATCCAATGTTAAAACCTTTGGTTGATATTCTTTGTTCTTCCAAGCAGACTGA
CCTTCACCTGAGGGGCCAGGCATGTATAACTTGGATGATTGATTTGAAACAGTATTTGCAACTC
TTCCTGTCAAGGAAACACTATTTACCACTGCTGACTGATCGACTGAACAATCATCATCAGGTAG
TGCAACTGTGTTATGCATATTACATAGGTCTGCAAGCATAGCAAGCTCTGGTCTGTTATTAGTA
ACATCAATCCCATCAACTGGTGAGTCTTCCAACTGAGGCCTTCCCATTCGAACCCTTGCCCTTT
TGACCAATGGCAAGTGCTCATCTCCATCTGACTTATTTACTTCAGTCTTTGGATTTGGAGAATC
TGCCGTTTTTTCACTTAACTCAGCCTGAAATTCATCATCCTTATCCGTAGAATGAGAAAAAATA
TTTCTACTTGGCTTTCTCTTTCTCTTGAAAATAACTGATTTTTTCATGGGAATGCTTGATGCAT
CATGCGATTTAAATTCTGTCTCTAAAGCCCCATTTTGAGATGTTTCACTGTCGCAGGTACTATC
TACCTTAGTGGTATAATTCAGCTTTTTATTGTTGTTACTGGTGCCAGGTGTGCCAGGTTGATTG
TCGATGCCCGCACTTGAATGCAACCAAACATCATCCTGTGTTGAAGGGGAACCTGAGTTACCTT
TTACATCCTCAACATACACATGATGACTGGAACCTTCCTTAGTACCATCAGCAGCCAAATCAAC
TGAAGCCAAACAGGTTCCACCTGAAAGCTTGCCAGAATCCTGAGCTTTTCTTGTGTCAGTGTTC
AGTGAACTTCTTGACCTCCGCAGTGATGAAACCCTACTCCGTGTGTAGCAATTTTGAGGCTGTG
CATCCCTTAGCTTCTTTGAAATTGAACTCGTAGACAAAGGGATGTTTCTCATTTCATCAAGGAT
AGACACATTTTCAGTAGGGTCATCAGGAGCAGAATTTACAACACATCGCTCACTTCCAACTGCG
GTAACAGAAGGCTCATCAGAATCGGCCATATTATGACCACTTGCAACTATGGAATGGTCTTCTT
GCTTTTTATCACTACCCATATTAGAGCTACTCACTAGACCCTCCGTATCCAAGCTGCTGTTATT
ATTAGCAAGTTTTTCTACACCTGGTTTTACTTCATTGGCAACCAAACCGAGCTTATTATTACCT
TCCTTCAAAGAATCATAAACATCGATTATCTCATCAACTGCCCTCACAAAATCAGATCCTTTTC
CCTGTCGCTTAGCAAGTAGAGACCTTCGTTTCTCTTCAGTGAATGCTTCAAGATCTGCATAGTT
GCAGAAAGCA
						
					

			
		

Sequences
Splice junction sequence	TGCCCTCACAAAATCAGATCCTTTTCCCTGTCGCTTAGCAAGTAGAGACCTTCGTTTCTCTTCA GTGAATGCTTCAAGATCTGCATAGTTGCAGAAAGCActctccagcgatgccatgtttggcacac tcaattgcaagacgtgttgcacgcgctatattttcttttgttcttgtcagtgtaccaagaaaag atccaaaa
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	CTCTCCAGCGATGCCATGTTTGGCACACTCAATTGCAAGACGTGTTGCACGCGCTATATTTTCT TTTGTTCTTGTCAGTGTACCAAGAAAAGATCCAAAAGCCTTTCGTGCTGCATTAGCCTCATCAT GTCCTGTTAATTTGCTCAAGTTCTTCTGTTGCTGACTATCAAAAGGACTCCTAGAATGAATATT ATCATTTGTAGATGTGGATCTGATTATCCGGTTCAAAGGTGACAATTGCTTCTGTGATCCTTCC TTGAAAGCAGGTGTATCAACTACAGTTTCAGGAATATACTTGGCATTCAGAAAGTTATCTGGAA AAGAAGTTGATCGAGAGAACCTTCTAGCTTGTGCAACAGCAATAAGTTCTTTCATAGGCATTGA ATCTGGAGAAGTGCTCTTATCCTTTAGGTTTCTATGGTTCAGTTCTTTTAATGCCAAAGCTGAG AAGGTGTGCCTGCAATACAACAATAAGTATTGTCATGCCTTTTCAGAAGACCATCTTAAATCAA CTAATCAAGTATCAAATTTGTATCAAATTTATAAAGTACTAATCCAGAGTTGTTATAGGAGTAA TTCAAAGGTACAATATAAACCAAAAAAGTTGCTATTCCAGGCATTCTACATGAATAGGTCATAA GTTCATCAGACTGTACGTTGCAAAATAAGCATTCCTGCTAAGAAGGTTCAAAAGGTGTAGAGCT CAATGTATAGATTTCAGACATGAACCATAAGAATGATGTTTCCATTGGGACCTAAATATTGCTC TCCAGTCTCCACTGGCTAGTAATGTCAGGCTCCAAAAATAGGCTCTATAGTTAAAGCCAAAATA GAGCAGACAAATAAATTAGAGACGTATGGAGGTAGAAAACGGTCCCGATTAATTCTCCTTAATA AAGGATTGTGAAGGAACTGAAATATCCCACAAAACATATATTAGGATCCACAAGCCCATAACAT GGAAAGATTTAGAATCTATATGATATAACTAAAGACAGGAGCATTAGAATAATAAGATCCTTGT TGATGAGTAAAACAAGATAACCATTCATGCCATTTATCCAGATTCCAGAGTGAATCAATTTGCC CACCTTTTTTGTTCAGTCAACTAGATTATGAAGTGTTACCTATGTTTAAGACATACATTGACCC ATTATTGAGTCTCCAAAGAAATGCATTTTGATGGATGAAAACATCAGGTTGACATTACAAGGAA AAGAATTTCGTAGGAAAAGAAAAATCAAATTGCATGGATGCTTCTTCTTCACAACTTTCTGAAG TTTCAATCAGAAAATGCCAGCATAAATTTGGAAAAGAAGCATGCATGTCCTAAATTTGTCACAA AAAGGTTATGAACAAGAAGATATGGAGCATATAATGATAAACAAATATCTCATGCAGACATAAT GGAAGATACAATTTGGCATGAAAGCTTACACTTCAAATGTCCGGGTGTCTGCATCAGATTGTAT ACTGGAAGATTTAGTGGCCAGCGAAGAGGTGCTTGCTGTATCAGCCACATTGACTACTGTTTCA GCTACAACAGTTTCATTATGCAGTACAGAATCACTGATCGCATTATTGTTAGAAGAAAGCAACT TTGGTCGGTAAATTGGCTCATCACATCTTTGAACACTTCTGTCAGTATCATATGCAGGACGGTC AACTGGTTTTGGGCCTTCATTGAAGTTGATTGGTTTGGCAACCTCGCTAACACTAGCTGTCCCC AAAGATGAAGATAAACGATCAGGTACAGCTACAGTCTGTGTACCACCAAGAGCAGACTCATTCA GCTTCATTGAAAGAGCCAAGCCTTTCCCGCAGTCGTCATTGCCAACTTCACTAGAGACCAACAA GCAATCAGTAGTTTTGCTATCAACGTGAGTTTCTTCACAAATATTGCCTTCTGTAACATGACTG TCATCTTTTGCTTCTGAAGGAACTGAAGCAGAAGCAGGAACACTGTTATTTTGCAGAATTGATT CTGAGGAGTGTGTTTTGCACTTTGGGCTATGCATGGATTCTGTGCACAAAGATGGCCTAGGGCT TTCTGCTATTGCAGATCCGTTAGTGGCTGTGACTACTGCATCTGCAGATTTATTAGAGTGGCTG TTTTCTGAAGCCACAAAACCATTTGGAATCAATTGCTTTGACCCTGTCACTTCAGGCAGATTAT TAGTTTCAGCAACATTAGCGGACATAGCTTCTAAGGCACGATGAAGACGTTTTGATGGAGGCAA AGCAGCTTCAACATCCAATGTTAAAACCTTTGGTTGATATTCTTTGTTCTTCCAAGCAGACTGA CCTTCACCTGAGGGGCCAGGCATGTATAACTTGGATGATTGATTTGAAACAGTATTTGCAACTC TTCCTGTCAAGGAAACACTATTTACCACTGCTGACTGATCGACTGAACAATCATCATCAGGTAG TGCAACTGTGTTATGCATATTACATAGGTCTGCAAGCATAGCAAGCTCTGGTCTGTTATTAGTA ACATCAATCCCATCAACTGGTGAGTCTTCCAACTGAGGCCTTCCCATTCGAACCCTTGCCCTTT TGACCAATGGCAAGTGCTCATCTCCATCTGACTTATTTACTTCAGTCTTTGGATTTGGAGAATC TGCCGTTTTTTCACTTAACTCAGCCTGAAATTCATCATCCTTATCCGTAGAATGAGAAAAAATA TTTCTACTTGGCTTTCTCTTTCTCTTGAAAATAACTGATTTTTTCATGGGAATGCTTGATGCAT CATGCGATTTAAATTCTGTCTCTAAAGCCCCATTTTGAGATGTTTCACTGTCGCAGGTACTATC TACCTTAGTGGTATAATTCAGCTTTTTATTGTTGTTACTGGTGCCAGGTGTGCCAGGTTGATTG TCGATGCCCGCACTTGAATGCAACCAAACATCATCCTGTGTTGAAGGGGAACCTGAGTTACCTT TTACATCCTCAACATACACATGATGACTGGAACCTTCCTTAGTACCATCAGCAGCCAAATCAAC TGAAGCCAAACAGGTTCCACCTGAAAGCTTGCCAGAATCCTGAGCTTTTCTTGTGTCAGTGTTC AGTGAACTTCTTGACCTCCGCAGTGATGAAACCCTACTCCGTGTGTAGCAATTTTGAGGCTGTG CATCCCTTAGCTTCTTTGAAATTGAACTCGTAGACAAAGGGATGTTTCTCATTTCATCAAGGAT AGACACATTTTCAGTAGGGTCATCAGGAGCAGAATTTACAACACATCGCTCACTTCCAACTGCG GTAACAGAAGGCTCATCAGAATCGGCCATATTATGACCACTTGCAACTATGGAATGGTCTTCTT GCTTTTTATCACTACCCATATTAGAGCTACTCACTAGACCCTCCGTATCCAAGCTGCTGTTATT ATTAGCAAGTTTTTCTACACCTGGTTTTACTTCATTGGCAACCAAACCGAGCTTATTATTACCT TCCTTCAAAGAATCATAAACATCGATTATCTCATCAACTGCCCTCACAAAATCAGATCCTTTTC CCTGTCGCTTAGCAAGTAGAGACCTTCGTTTCTCTTCAGTGAATGCTTCAAGATCTGCATAGTT GCAGAAAGCA

			
						 Conservation Information
					
						Conserved circRNAs
						
							osa_circ_019902* 						
					
						PMCS

Conservation Information
Conserved circRNAs	osa_circ_019902*
PMCS

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							15298595-15298816(-)
15295265-15298816(-)
15298810-15295406(+)
						
					

						Potential amino acid sequence
						
							MGSDKKQEDHSIVASGHNMADSDEPSVTAVGSERCVVNSAPDDPTENVSILDEMRNIPLSTSSI
SKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGKLSGGTCLASVDLAADGTKEGSSHH
VYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNNKKLNYTTKVDSTCDSETSQNGALE
TEFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEFQAELSEKTADSPNPKTEVNKSDGD
EHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLADLCNMHNTVALPDDDCSVDQSAVVN
SVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPKVLTLDVEAALPPSKRLHRALEAMS
ANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVTATNGSAIAESPRPSLCTESMHSPK
CKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEETHVDSKTTDCLLVSSEVGNDDCGKG
LALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPINFNEGPKPVDRPAYDTDRSVQRCD
EPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTASTSSLATKSSSIQSDADTRTFEVHTF
SALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRSTSFPDNFLNAKYIPETVVDTPAFK
EGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKLTGHDEANAARKAFGSFLGTLTRTK
ENIARATRLAIECAKHGIAGECFLQLCRS*(-)
MASLESAFCNYADLEAFTEEKRRSLLAKRQGKGSDFVRAVDEIIDVYDSLKEVKPGVEKLANNN
SSLDTEGLVSSSNMGSDKKQEDHSIVASGHNMADSDEPSVTAVGSERCVVNSAPDDPTENVSIL
DEMRNIPLSTSSISKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGKLSGGTCLASVD
LAADGTKEGSSHHVYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNNKKLNYTTKVDS
TCDSETSQNGALETEFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEFQAELSEKTADS
PNPKTEVNKSDGDEHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLADLCNMHNTVALP
DDDCSVDQSAVVNSVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPKVLTLDVEAALP
PSKRLHRALEAMSANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVTATNGSAIAESP
RPSLCTESMHSPKCKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEETHVDSKTTDCLL
VSSEVGNDDCGKGLALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPINFNEGPKPVDR
PAYDTDRSVQRCDEPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTASTSSLATKSSSIQ
SDADTRTFEVHTFSALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRSTSFPDNFLNAK
YIPETVVDTPAFKEGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKLTGHDEANAARK
AFGSFLGTLTRTKENIARATRLAIECAKHGIAGECFLQLCRS*(-)
MLQDLHSCRKHSPAMPCLAHSIARRVARAIFSFVLVSVPRKDPKAFRAALASSCPVNLLKFFCC
*(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	15298595-15298816(-) 15295265-15298816(-) 15298810-15295406(+)
Potential amino acid sequence	MGSDKKQEDHSIVASGHNMADSDEPSVTAVGSERCVVNSAPDDPTENVSILDEMRNIPLSTSSI SKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGKLSGGTCLASVDLAADGTKEGSSHH VYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNNKKLNYTTKVDSTCDSETSQNGALE TEFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEFQAELSEKTADSPNPKTEVNKSDGD EHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLADLCNMHNTVALPDDDCSVDQSAVVN SVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPKVLTLDVEAALPPSKRLHRALEAMS ANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVTATNGSAIAESPRPSLCTESMHSPK CKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEETHVDSKTTDCLLVSSEVGNDDCGKG LALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPINFNEGPKPVDRPAYDTDRSVQRCD EPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTASTSSLATKSSSIQSDADTRTFEVHTF SALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRSTSFPDNFLNAKYIPETVVDTPAFK EGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKLTGHDEANAARKAFGSFLGTLTRTK ENIARATRLAIECAKHGIAGECFLQLCRS(-) MASLESAFCNYADLEAFTEEKRRSLLAKRQGKGSDFVRAVDEIIDVYDSLKEVKPGVEKLANNN SSLDTEGLVSSSNMGSDKKQEDHSIVASGHNMADSDEPSVTAVGSERCVVNSAPDDPTENVSIL DEMRNIPLSTSSISKKLRDAQPQNCYTRSRVSSLRRSRSSLNTDTRKAQDSGKLSGGTCLASVD LAADGTKEGSSHHVYVEDVKGNSGSPSTQDDVWLHSSAGIDNQPGTPGTSNNNKKLNYTTKVDS TCDSETSQNGALETEFKSHDASSIPMKKSVIFKRKRKPSRNIFSHSTDKDDEFQAELSEKTADS PNPKTEVNKSDGDEHLPLVKRARVRMGRPQLEDSPVDGIDVTNNRPELAMLADLCNMHNTVALP DDDCSVDQSAVVNSVSLTGRVANTVSNQSSKLYMPGPSGEGQSAWKNKEYQPKVLTLDVEAALP PSKRLHRALEAMSANVAETNNLPEVTGSKQLIPNGFVASENSHSNKSADAVVTATNGSAIAESP RPSLCTESMHSPKCKTHSSESILQNNSVPASASVPSEAKDDSHVTEGNICEETHVDSKTTDCLL VSSEVGNDDCGKGLALSMKLNESALGGTQTVAVPDRLSSSLGTASVSEVAKPINFNEGPKPVDR PAYDTDRSVQRCDEPIYRPKLLSSNNNAISDSVLHNETVVAETVVNVADTASTSSLATKSSSIQ SDADTRTFEVHTFSALALKELNHRNLKDKSTSPDSMPMKELIAVAQARRFSRSTSFPDNFLNAK YIPETVVDTPAFKEGSQKQLSPLNRIIRSTSTNDNIHSRSPFDSQQQKNLSKLTGHDEANAARK AFGSFLGTLTRTKENIARATRLAIECAKHGIAGECFLQLCRS(-) MLQDLHSCRKHSPAMPCLAHSIARRVARAIFSFVLVSVPRKDPKAFRAALASSCPVNLLKFFCC *(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Huang et al., 2021

circRNA

Detail information of BGIOSGA010705_circ_g.1

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