Splice junction sequence |
GATTGCTTCTGATAATCCTGATGTTTTGGGTGAAGGACTTCATGAATCTGGTACAGATATGTTT GGCTTCTCCAACCCAGAAGTCGATAAACTTATTCAGgtcatgctatgtggccagcaattatcgt ggatgagtctgttattgtaaagcggaaaggtctaaacaacaagatctctggaggaagatcagtc ctcgtaca
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 791 Transcript exons: 1756068-1756194,1756311-1756415,1756562-1756767,1756865- 1756957,1757047-1757144,1757227-1757388 GTCATGCTATGTGGCCAGCAATTATCGTGGATGAGTCTGTTATTGTAAAGCGGAAAGGTCTAAA CAACAAGATCTCTGGAGGAAGATCAGTCCTCGTACAGTTTTTTGGCACCCATGATTTTGCTAGA ATACAAGTCAAACAAGCGGTCTCATTTCTAAAAGGGCTTCTCTCACGGTCCCCCCTGAAGTGCA AGCAACCTCGGTTTGAAGAGGCCATGGAGGAGGCAAAAATGTACCTAAAAGAATATAAGCTTCC AGGAAGGATGGATCAACTTCAGAAAGTTGCTGATACTGATTGTTCGGAAAGGATTAATAGTGGA GAAGAGGACAGCTCAAACTCGGGTGATGATTACACAAAAGATGGAGAAGTCTGGTTGCGGCCAA CAGAACTTGGAGATTGCTTGCATAGAATAGGCGATCTGCAAATAATTAATCTTGGAAGGATCGT GACAGACTCAGAATTTTTCAAGGATAGTAAGCATACTTGGCCTGAAGGGTATACAGCTACAAGA AAATTCATATCACTAAAAGATCCTAATGCATCTGCCATGTACAAGATGGAAGTGCTTAGAGATG CCGAGTCAAAGACTCGCCCTGTTTTCAGAGTGACGACCAATAGCGGTGAGCAGTTCAAAGGGGA CACTCCATCTGCCTGCTGGAATAAAATATATAATAGGATAAAAAAGATTCAGATTGCTTCTGAT AATCCTGATGTTTTGGGTGAAGGACTTCATGAATCTGGTACAGATATGTTTGGCTTCTCCAACC CAGAAGTCGATAAACTTATTCAG
|
Genomic sequence |
GTCATGCTATGTGGCCAGCAATTATCGTGGATGAGTCTGTTATTGTAAAGCGGAAAGGTCTAAA CAACAAGATCTCTGGAGGAAGATCAGTCCTCGTACAGTTTTTTGGCACCCATGATTTTGCTAGG TGAGCAGATCTTCTTAAAGTCTGTAGAGATCTAGTTATACTACCGAACTGTTGAAATTAATGTT ACAAATCATAATTTCGAAGTGGAATTGACTATATTTCCTTTGGTCATATAGAATACAAGTCAAA CAAGCGGTCTCATTTCTAAAAGGGCTTCTCTCACGGTCCCCCCTGAAGTGCAAGCAACCTCGGT TTGAAGAGGCCATGGAGGAGGCAAAAATGCAAGTTTCTCTTGCTTTTCACTGACATTCTACTTT TTTTTTATTTCCTAATATAGTGAAGTTGTTAACAAACAGACCATTTCCTTATCTTAATCTGAAC AAAAACATAATTCCTGTGTTAAATTGCTGTAACTTACCTCATCCAGGTACCTAAAAGAATATAA GCTTCCAGGAAGGATGGATCAACTTCAGAAAGTTGCTGATACTGATTGTTCGGAAAGGATTAAT AGTGGAGAAGAGGACAGCTCAAACTCGGGTGATGATTACACAAAAGATGGAGAAGTCTGGTTGC GGCCAACAGAACTTGGAGATTGCTTGCATAGAATAGGCGATCTGCAAATAATTAATCTTGGTAA TGTTTGAAACTAATTAGTATGTTGGATCATCCTTAGTTGGAATGGACTCTGCTCATTATGGATA GGCGTATATCACTTGTCTTTGTCTGCCAGGAAGGATCGTGACAGACTCAGAATTTTTCAAGGAT AGTAAGCATACTTGGCCTGAAGGGTATACAGCTACAAGAAAATTCATATCACTAAAAGGTAAAT TATTTACCAGTTTTTGTGCTTTCTATATTAATCAGGCAGTTTTGTCTCATATATGCGCGATTTC TTGCTTTGACTTTAAGCAGATCCTAATGCATCTGCCATGTACAAGATGGAAGTGCTTAGAGATG CCGAGTCAAAGACTCGCCCTGTTTTCAGAGTGACGACCAATAGCGGTGAGCAGGTTAGGTTTCT AGGTGGAAAGCTTGTGTGGATAGAAAGTTTGTTATAGCCATGTGTAAAATTGATACTTGATTTT TGGACAGTTCAAAGGGGACACTCCATCTGCCTGCTGGAATAAAATATATAATAGGATAAAAAAG ATTCAGATTGCTTCTGATAATCCTGATGTTTTGGGTGAAGGACTTCATGAATCTGGTACAGATA TGTTTGGCTTCTCCAACCCAGAAGTCGATAAACTTATTCAG |