| CircRNA Name |
AT1G79990_circ_g.22 |
| ID in PlantcircBase |
ath_circ_011191 |
| Alias |
Ath_circ_FC0024, Ath_circ_FC1095, Ath_circ_FC1096, AT1G79990_C1 |
| Organism |
Arabidpsis thaliana |
| Position |
chr1: 30090399-30090595 JBrowse» |
| Reference genome |
TAIR10.38 |
| Type |
e-circRNA
|
| Identification method |
CIRCexplorer, CIRI, PcircRNA_finder, circRNA_finder, find_circ, CIRI-full, CIRI2 |
| Parent gene |
AT1G79990 |
| Parent gene annotation |
Coatomer subunit beta'
|
| Parent gene strand |
+ |
| Alternative splicing |
AT1G79990_circ_g.1 AT1G79990_circ_g.2 AT1G79990_circ_g.3 AT1G79990_circ_g.4 AT1G79990_circ_g.5 AT1G79990_circ_g.6 AT1G79990_circ_g.7 AT1G79990_circ_g.8 AT1G79990_circ_g.9 AT1G79990_circ_g.10 AT1G79990_circ_g.11 AT1G79990_circ_g.12 AT1G79990_circ_g.13 AT1G79990_circ_g.14 AT1G79990_circ_g.15 AT1G79990_circ_g.16 AT1G79990_circ_g.17 AT1G79990_circ_g.18 AT1G79990_circ_g.19 AT1G79990_circ_g.20 AT1G79990_circ_g.21 AT1G79990_circ_g.23 AT1G79990_circ_g.24 AT1G79990_circ_g.25 |
| Support reads |
9 |
| Tissues |
root, aerial, whole_plant, leaf |
| Exon boundary |
Yes-Yes
"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
|
| Splicing signals |
GT-AG
The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
|
| Number of exons covered |
AT1G79990.1:1
AT1G79990.2:1
|
