Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT1G05570_circ_g.5 |
ID in PlantcircBase | ath_circ_000830 |
Alias | 1:1651437-1651757 |
Organism | Arabidpsis thaliana |
Position | chr1: 1651437-1651757 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT1G05570 |
Parent gene annotation |
Callose synthase 1 |
Parent gene strand | - |
Alternative splicing | AT1G05570_circ_g.2 AT1G05570_circ_g.3 AT1G05570_circ_g.4 |
Support reads | 2 |
Tissues | leaf |
Exon boundary | Yes-Yes |
Splicing signals | CT-AC |
Number of exons covered | AT1G05570.3:2 AT1G05570.2:2 AT1G05570.4:2 AT1G05570.1:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.223261971 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |