Plant Circular RNA Database

Detail information of Solyc04g063280.2_circ_g.4

			
						 General Information
					
						CircRNA Name
						Solyc04g063280.2_circ_g.4
					
						ID in PlantcircBase
						sly_circ_001462
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr4: 55411665-55416032  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							ue-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc04g063280.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Solyc04g063280.2_circ_g.1 Solyc04g063280.2_circ_g.2 Solyc04g063280.2_circ_g.3 						
					
						Support reads
						5
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc04g063280.2.1:4

General Information
CircRNA Name	Solyc04g063280.2_circ_g.4
ID in PlantcircBase	sly_circ_001462
Alias	NA
Organism	Solanum lycopersicum
Position	chr4: 55411665-55416032 JBrowse»
Reference genome	SL2.50.38
Type	ue-circRNA
Identification method	CIRI
Parent gene	Solyc04g063280.2
Parent gene annotation	protein_coding
Parent gene strand	-
Alternative splicing	Solyc04g063280.2_circ_g.1 Solyc04g063280.2_circ_g.2 Solyc04g063280.2_circ_g.3
Support reads	5
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc04g063280.2.1:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							GTCTGGCCCAATCAGCATATCACTAGTTGCCCTTTCTGCACAAGCCGCCGCATTGTTAGCCATC
TCTTCTAGTTTCCACTGTTTCTTCAAATTGTTCTCCcttcagctcattatatgcagcgtaatac
tggggaaatcgtccccctggccctcccaaagcttcttgccatgaatctatcaaaatcaaaatct
tctccctc

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 439
Transcript exons: 55411665-55411778,55411867-55411965,55412546-55412624,55
415886-55416032
CTTCAGCTCATTATATGCAGCGTAATACTGGGGAAATCGTCCCCCTGGCCCTCCCAAAGCTTCT
TGCCATGAATCTATCAAAATCAAAATCTTCTCCCTCACATTTAAATCAGGCTTCTTCTTCACAA
TTTTGACCATGTCTCGTAAAATCTCACGCTCCACAATTTGCTGAAATACATTCTCTCCACAATT
TTTGCTCAGAGTCTCAAGAACGAATAGTGTAAGGAGCTGTATTTTTGGATTTTTACTCCCCAAG
CGTTTCTTGATAATCTTAAGAGCATCCTTTGCTTGTCCAGGATTCATGTTGATGATATCACAAA
GCTCAATGTTTATAGCCCAGTCTGGCCCAATCAGCATATCACTAGTTGCCCTTTCTGCACAAGC
CGCCGCATTGTTAGCCATCTCTTCTAGTTTCCACTGTTTCTTCAAATTGTTCTCC
						
					

						Genomic sequence
						
							CTTCAGCTCATTATATGCAGCGTAATACTGGGGAAATCGTCCCCCTGGCCCTCCCAAAGCTTCT
TGCCATGAATCTATCAAAATCAAAATCTTCTCCCTCACATTTAAATCAGGCTGTAATCAAAAAC
AATAAGCCTAGTTATTAGAGATCTCAAATAGGTTTAACAAATTAAGGAAACCATGTATATTAGG
TGTTGTTTACCTTCTTCTTCACAATTTTGACCATGTCTCGTAAAATCTCACGCTCCACAATTTG
CTGAAATACATTCTCTCCACAATTTTTGCTCAGAGTCTCAAGAACCTGAAAAAATAATTTGTAG
AAAGAAAGAATTAGCAAATAATCTTCAATACAAGTTTCTCTTTATAAAATCTTCTGCAACTTCA
AAGGGCAAATCCCATGACAAGAGCCATATTTAGAACTGTTATATGCACATGAAAAATCTACTCT
TTGGATATTCATTGAATTACTGATAGCTCAAATGTGTCTTGGGACACGAGCAGTCAAAATATGA
TGTGTTGATGAAGTTGATGAAGTGAATGTCTATTGCCAATTGTTATTGACCTAACTGCAAAATG
CCAACACTATGGATGTGCTGAAGCACAGAGGAGATATTTCAACATAGTTCACCAGTTAGCTAAA
GTTTGATAATTATACTCACCTCTAACTGTTATACCAGTTTCACAGACGATATATCAGAAAGACA
GAAAGTTGAGACCCTTAGCATGTCATATTCGTTTGTACAAACAAAAGGTGGATTACTAAGATTT
GAGACGCTCAAATTTTAGACCTGTATTTTTAATCATAATTGCAAAACTAACTCTATGTAGCCTA
AACAAAAAGATGAAATCTAGTAATGGTAAGGCAAGTGAAATGTACTTACGAATAGTGTAAGGAG
CTGTATTTTTGGATTTTTACTCCCCAAGCGTTTCTTGATAATCTTAAGAGCATCCTTTGCTTGT
CTGAAATTAGAATTTAATCAGTAAGCTGGTAAAAAATCAACTATAGAAAAGCTCAACTTGACAA
GACCAACTAGGATAATTTAAAATTTTACTACAGGACAACAAACAATTTCAGAAAATCTAGATGG
AACATGAACTGACAATGAAGAATACCATTTCAAATAAAAGAAAATGCAACAGAAGTGCATCTTA
CACTTGTATCAGCCAGCAAGGCAACATCCAACTTTATACATGTTTGCCTACTTTACTGCCTATC
ATGCTCTGAAATTTCTTTGAGAGACTTTACTACCCATAAGCATGACTTACTTTTTCCTTTTTCA
CTTTTCCACTTCCCCAGGTACATAATTTTCAGGTGAAAAGAAGATAGACAACTAACAGTCACGG
TGAAATACTTCCCACAATTTCATTAATAAATAAGTTGTTAAATCTAAAACCACAAGGGTTCTTT
TAAGCCAAAAAGGATTAAAACAAGGAAATCCACTCTCCTTATCTCGTTGCGAATGTGATGGAAG
TGTTAAATTTAACTCTTAAAGAGGATGGAAGTCATAAATAACTCAAGAGCTTTTATATAGATGG
ACACAGTGATACGAGCTTGGAGATGGCACATATTTGCATGACACATCATTATTTTGATGCTGAA
AGAGACCAAATGTTGCACCTCCGAATTACAATATTGGCTTTTGAAGCTGTTTGTGGCCTAAAAT
TAACTTGGCCAAAAGAAGTGTTTTTATTTTAAATGCTAAGACAATATTTTGGAGCTTTCCAATA
ATCTTGGATGCAAAGTTCAGTCATTCCCTACTGCTTATTTGAGCCTTTTTTTTTTTGGTTCTAG
ATTGAAAGAAAATGGGATCCGGCAAGGAACTCTTGATGTGGAAAAAGATAGCTCCATGGCAGAA
ACAATATTTATCCTTTGGTGGAAGACTCACTAAGGTGAATATTTTTTTTGATCATATGCTCACC
TATTGATGTCGCTCATTCCCCTTTCTTCTACATTAGAAAAATAGTTTCATAAACTTATGAGCAA
CGGAAACTCTAGCAGAGAAAGCTGCATATGGTTAGATGGAAAAATGTAGTGATCAATAAAGGTG
GAGAGTTGGGAGTAAAGTATGTCAAGCTCCATAACAAAGTATAGCTTTTTAAATGGTTTTCAAA
ACTACATCATAGCAAAAAGGGGAGTCGAGGCCTGAGGGATGTATCTGATCATTAAATAATGGAA
CAAAAATTACTGGACTCCAGCTTCACTCATGCCTAATAATATACCATCTGGAAGCACATTCACA
GTTATTAAAGAGAATTTCATATGCATACTAAGCTAAGAATGGGTAAATGTATCACATGAGATTT
TGGTTGTATTATTGGTAGGACATTGGGTTGCACAAAAATGAGTTCCCTAATATATTAATCTCGT
TGTAATAACGACAGCATCGCAGCTGAAAGATATCGATTACAGGATGACACTGCAGTTCGGGAAA
ACTCTTAATGATTGGTGAATTAGGAGCTAGAATTTCTACATCCTGTTTCTTTGGATACATGAAG
TCACAACACACTTGTCCAGCTAGCTGTTGGTGGGATCTCTGTTAAAAGCTGCTATAATTGTCTT
GAAAGAAACATGCCCGCCTTGGAAAATGAACTGGAAAACTAAAGCACCTCTTAAAGTTGTTTGT
GTTGAATGAGTAGCAGGCTAGCACCTAAGATCTAAAGGTGCCGCTTTGACTCGTGATAAACTTC
AAAGAAGAGGCTTCTTTTGTGAGAACTACTTGAAAAGCATCAATCACTTGTTCGTCCACTGCAA
CCAAGCACAGAAAGTCTGGTCACTCTTTCTAATCTGTTTGGAGTGTCTCGGGTCAAGCCCAGGG
TAGTGAGAGTTTGCTGCTCTGTTGCAGGCTCAGAGAAATTGCAGAAACTGAAGATGTCTATGTA
AGACAATCCCATAATGCAATTACGGATTGATTGACTAGCATTGAGGATGAAGAAAGAGAAATCT
TGGTCCAGTAGTATTAACTTTTAACTATTCCATAGCACTTCAAGCACAACATAACTAACAGAGT
GATGAACTAGCTTTGTTTCTTGGTAAGAGATGATCTATTCAAGTTCTATAACTGGTTTTCCTTT
GACCAATTTCCTTCATTCCACCTATCTCCTTACCTTATGATCATCATTCACTCTTAACTTATTT
CTCTTTGTTTAGTAAGATTTTAAAATAGAAATTAAGAAAATCATAATGGAGATGTTTCCTAGGC
AGTTGCTTTCAGGATTTCTCCTATGGATTTGGAGCAACTTCCCCCCCCCCCCCTACAGAGAATC
GTGAAACGATTGCCACTATTGGGGGATTGTTTCAACCTAATGAACTGACAGGCTAGGCCTTCAC
CACTGCATATCCTGACTGTGCCTTGTCATTTCACAACTTCAGTTATGCAGCTAGTCCACCACAA
CTGCCAGATTGGAGTATAATACAGATGTTTCTTTTCCAAACTCAGCATGATTTTGCCAATGGTG
GAAAAAAAATTGAGCATGCAAAATACATGACTATACTCAACTCAGCATCCACCTTGGAAGACCA
AATCCCAAGTGATATCATGAGAAACTCATCATGTTATATTGATGCATACAAAGATGAGTTATCA
TTGCCTTTTACGTGACTTGATTGATATGAGACGACTGTTGTGTCTTATTTTAATGACTTCAGCT
CATTCTTGCTGGATACTCCTTATGAAAGTGACATAAGGGATAAAGGTATACTTCAAGTCCCAAA
AGTTCAACAACAACAGCTTCACAATCCTGATAGCGGTCGTCCCAAGAATTATGTAGCAAGTGTG
TAAACCAGTATGTTTAGATTCAACAGATGACTCCACCACAAACACTTCAGGAAAAGCAACATAA
ACATCCTGGTTTACACACTTGTCACTTAACTCTATGGAACAACCACCATCAGTAATGTGAATTT
GTTGATCCAGAAGTTTTGAAACTTGCGATATATTCCTATCAGTCATGTCACTTGGTACCCAACA
AATACGAGCTAAAATAATTAAAATAAGACCAACAATCGTCTCATATCCATCAACAGCCCGCAAA
ACGGTAATGATAACCCATCCTTGTATGAGTCAGTATCAGTGATGAATTTCTCAAGTTATCACTT
GAGATTTGGTCTTAAAAGGTGGATGATGAATTTCTCAAGATATCAAAATAAGCTACACAGTCAT
TTCAAGCAATCTTTACCTAGGATTACAAAATACCACATAAACATATAAGCAAGAAAGTTACCCA
GGATTCATGTTGATGATATCACAAAGCTCAATGTTTATAGCCCAGTCTGGCCCAATCAGCATAT
CACTAGTTGCCCTTTCTGCACAAGCCGCCGCATTGTTAGCCATCTCTTCTAGTTTCCACTGTTT
CTTCAAATTGTTCTCC
						
					

			
		

Sequences
Splice junction sequence	GTCTGGCCCAATCAGCATATCACTAGTTGCCCTTTCTGCACAAGCCGCCGCATTGTTAGCCATC TCTTCTAGTTTCCACTGTTTCTTCAAATTGTTCTCCcttcagctcattatatgcagcgtaatac tggggaaatcgtccccctggccctcccaaagcttcttgccatgaatctatcaaaatcaaaatct tctccctc
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 439 Transcript exons: 55411665-55411778,55411867-55411965,55412546-55412624,55 415886-55416032 CTTCAGCTCATTATATGCAGCGTAATACTGGGGAAATCGTCCCCCTGGCCCTCCCAAAGCTTCT TGCCATGAATCTATCAAAATCAAAATCTTCTCCCTCACATTTAAATCAGGCTTCTTCTTCACAA TTTTGACCATGTCTCGTAAAATCTCACGCTCCACAATTTGCTGAAATACATTCTCTCCACAATT TTTGCTCAGAGTCTCAAGAACGAATAGTGTAAGGAGCTGTATTTTTGGATTTTTACTCCCCAAG CGTTTCTTGATAATCTTAAGAGCATCCTTTGCTTGTCCAGGATTCATGTTGATGATATCACAAA GCTCAATGTTTATAGCCCAGTCTGGCCCAATCAGCATATCACTAGTTGCCCTTTCTGCACAAGC CGCCGCATTGTTAGCCATCTCTTCTAGTTTCCACTGTTTCTTCAAATTGTTCTCC
Genomic sequence	CTTCAGCTCATTATATGCAGCGTAATACTGGGGAAATCGTCCCCCTGGCCCTCCCAAAGCTTCT TGCCATGAATCTATCAAAATCAAAATCTTCTCCCTCACATTTAAATCAGGCTGTAATCAAAAAC AATAAGCCTAGTTATTAGAGATCTCAAATAGGTTTAACAAATTAAGGAAACCATGTATATTAGG TGTTGTTTACCTTCTTCTTCACAATTTTGACCATGTCTCGTAAAATCTCACGCTCCACAATTTG CTGAAATACATTCTCTCCACAATTTTTGCTCAGAGTCTCAAGAACCTGAAAAAATAATTTGTAG AAAGAAAGAATTAGCAAATAATCTTCAATACAAGTTTCTCTTTATAAAATCTTCTGCAACTTCA AAGGGCAAATCCCATGACAAGAGCCATATTTAGAACTGTTATATGCACATGAAAAATCTACTCT TTGGATATTCATTGAATTACTGATAGCTCAAATGTGTCTTGGGACACGAGCAGTCAAAATATGA TGTGTTGATGAAGTTGATGAAGTGAATGTCTATTGCCAATTGTTATTGACCTAACTGCAAAATG CCAACACTATGGATGTGCTGAAGCACAGAGGAGATATTTCAACATAGTTCACCAGTTAGCTAAA GTTTGATAATTATACTCACCTCTAACTGTTATACCAGTTTCACAGACGATATATCAGAAAGACA GAAAGTTGAGACCCTTAGCATGTCATATTCGTTTGTACAAACAAAAGGTGGATTACTAAGATTT GAGACGCTCAAATTTTAGACCTGTATTTTTAATCATAATTGCAAAACTAACTCTATGTAGCCTA AACAAAAAGATGAAATCTAGTAATGGTAAGGCAAGTGAAATGTACTTACGAATAGTGTAAGGAG CTGTATTTTTGGATTTTTACTCCCCAAGCGTTTCTTGATAATCTTAAGAGCATCCTTTGCTTGT CTGAAATTAGAATTTAATCAGTAAGCTGGTAAAAAATCAACTATAGAAAAGCTCAACTTGACAA GACCAACTAGGATAATTTAAAATTTTACTACAGGACAACAAACAATTTCAGAAAATCTAGATGG AACATGAACTGACAATGAAGAATACCATTTCAAATAAAAGAAAATGCAACAGAAGTGCATCTTA CACTTGTATCAGCCAGCAAGGCAACATCCAACTTTATACATGTTTGCCTACTTTACTGCCTATC ATGCTCTGAAATTTCTTTGAGAGACTTTACTACCCATAAGCATGACTTACTTTTTCCTTTTTCA CTTTTCCACTTCCCCAGGTACATAATTTTCAGGTGAAAAGAAGATAGACAACTAACAGTCACGG TGAAATACTTCCCACAATTTCATTAATAAATAAGTTGTTAAATCTAAAACCACAAGGGTTCTTT TAAGCCAAAAAGGATTAAAACAAGGAAATCCACTCTCCTTATCTCGTTGCGAATGTGATGGAAG TGTTAAATTTAACTCTTAAAGAGGATGGAAGTCATAAATAACTCAAGAGCTTTTATATAGATGG ACACAGTGATACGAGCTTGGAGATGGCACATATTTGCATGACACATCATTATTTTGATGCTGAA AGAGACCAAATGTTGCACCTCCGAATTACAATATTGGCTTTTGAAGCTGTTTGTGGCCTAAAAT TAACTTGGCCAAAAGAAGTGTTTTTATTTTAAATGCTAAGACAATATTTTGGAGCTTTCCAATA ATCTTGGATGCAAAGTTCAGTCATTCCCTACTGCTTATTTGAGCCTTTTTTTTTTTGGTTCTAG ATTGAAAGAAAATGGGATCCGGCAAGGAACTCTTGATGTGGAAAAAGATAGCTCCATGGCAGAA ACAATATTTATCCTTTGGTGGAAGACTCACTAAGGTGAATATTTTTTTTGATCATATGCTCACC TATTGATGTCGCTCATTCCCCTTTCTTCTACATTAGAAAAATAGTTTCATAAACTTATGAGCAA CGGAAACTCTAGCAGAGAAAGCTGCATATGGTTAGATGGAAAAATGTAGTGATCAATAAAGGTG GAGAGTTGGGAGTAAAGTATGTCAAGCTCCATAACAAAGTATAGCTTTTTAAATGGTTTTCAAA ACTACATCATAGCAAAAAGGGGAGTCGAGGCCTGAGGGATGTATCTGATCATTAAATAATGGAA CAAAAATTACTGGACTCCAGCTTCACTCATGCCTAATAATATACCATCTGGAAGCACATTCACA GTTATTAAAGAGAATTTCATATGCATACTAAGCTAAGAATGGGTAAATGTATCACATGAGATTT TGGTTGTATTATTGGTAGGACATTGGGTTGCACAAAAATGAGTTCCCTAATATATTAATCTCGT TGTAATAACGACAGCATCGCAGCTGAAAGATATCGATTACAGGATGACACTGCAGTTCGGGAAA ACTCTTAATGATTGGTGAATTAGGAGCTAGAATTTCTACATCCTGTTTCTTTGGATACATGAAG TCACAACACACTTGTCCAGCTAGCTGTTGGTGGGATCTCTGTTAAAAGCTGCTATAATTGTCTT GAAAGAAACATGCCCGCCTTGGAAAATGAACTGGAAAACTAAAGCACCTCTTAAAGTTGTTTGT GTTGAATGAGTAGCAGGCTAGCACCTAAGATCTAAAGGTGCCGCTTTGACTCGTGATAAACTTC AAAGAAGAGGCTTCTTTTGTGAGAACTACTTGAAAAGCATCAATCACTTGTTCGTCCACTGCAA CCAAGCACAGAAAGTCTGGTCACTCTTTCTAATCTGTTTGGAGTGTCTCGGGTCAAGCCCAGGG TAGTGAGAGTTTGCTGCTCTGTTGCAGGCTCAGAGAAATTGCAGAAACTGAAGATGTCTATGTA AGACAATCCCATAATGCAATTACGGATTGATTGACTAGCATTGAGGATGAAGAAAGAGAAATCT TGGTCCAGTAGTATTAACTTTTAACTATTCCATAGCACTTCAAGCACAACATAACTAACAGAGT GATGAACTAGCTTTGTTTCTTGGTAAGAGATGATCTATTCAAGTTCTATAACTGGTTTTCCTTT GACCAATTTCCTTCATTCCACCTATCTCCTTACCTTATGATCATCATTCACTCTTAACTTATTT CTCTTTGTTTAGTAAGATTTTAAAATAGAAATTAAGAAAATCATAATGGAGATGTTTCCTAGGC AGTTGCTTTCAGGATTTCTCCTATGGATTTGGAGCAACTTCCCCCCCCCCCCCTACAGAGAATC GTGAAACGATTGCCACTATTGGGGGATTGTTTCAACCTAATGAACTGACAGGCTAGGCCTTCAC CACTGCATATCCTGACTGTGCCTTGTCATTTCACAACTTCAGTTATGCAGCTAGTCCACCACAA CTGCCAGATTGGAGTATAATACAGATGTTTCTTTTCCAAACTCAGCATGATTTTGCCAATGGTG GAAAAAAAATTGAGCATGCAAAATACATGACTATACTCAACTCAGCATCCACCTTGGAAGACCA AATCCCAAGTGATATCATGAGAAACTCATCATGTTATATTGATGCATACAAAGATGAGTTATCA TTGCCTTTTACGTGACTTGATTGATATGAGACGACTGTTGTGTCTTATTTTAATGACTTCAGCT CATTCTTGCTGGATACTCCTTATGAAAGTGACATAAGGGATAAAGGTATACTTCAAGTCCCAAA AGTTCAACAACAACAGCTTCACAATCCTGATAGCGGTCGTCCCAAGAATTATGTAGCAAGTGTG TAAACCAGTATGTTTAGATTCAACAGATGACTCCACCACAAACACTTCAGGAAAAGCAACATAA ACATCCTGGTTTACACACTTGTCACTTAACTCTATGGAACAACCACCATCAGTAATGTGAATTT GTTGATCCAGAAGTTTTGAAACTTGCGATATATTCCTATCAGTCATGTCACTTGGTACCCAACA AATACGAGCTAAAATAATTAAAATAAGACCAACAATCGTCTCATATCCATCAACAGCCCGCAAA ACGGTAATGATAACCCATCCTTGTATGAGTCAGTATCAGTGATGAATTTCTCAAGTTATCACTT GAGATTTGGTCTTAAAAGGTGGATGATGAATTTCTCAAGATATCAAAATAAGCTACACAGTCAT TTCAAGCAATCTTTACCTAGGATTACAAAATACCACATAAACATATAAGCAAGAAAGTTACCCA GGATTCATGTTGATGATATCACAAAGCTCAATGTTTATAGCCCAGTCTGGCCCAATCAGCATAT CACTAGTTGCCCTTTCTGCACAAGCCGCCGCATTGTTAGCCATCTCTTCTAGTTTCCACTGTTT CTTCAAATTGTTCTCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.321259808

Conservation Information
Conserved circRNAs	NA
PMCS	0.321259808

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							55415896-55411733(+)
55415997-55415990(-)
						
						Potential amino acid sequence
						
							MLMISQSSMFIAQSGPISISLVALSAQAAALLAISSSFHCFFKLFSLQLIICSVILGKSSPWPS
QSFLP*(+)
MANNAAACAERATSDMLIGPDWAINIELCDIINMNPGQAKDALKIIKKRLGSKNPKIQLLTLFV
LETLSKNCGENVFQQIVEREILRDMVKIVKKKPDLNVREKILILIDSWQEALGGPGGRFPQYYA
AYNELKGEQFEETVETRRDG*(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	55415896-55411733(+) 55415997-55415990(-)
Potential amino acid sequence	MLMISQSSMFIAQSGPISISLVALSAQAAALLAISSSFHCFFKLFSLQLIICSVILGKSSPWPS QSFLP(+) MANNAAACAERATSDMLIGPDWAINIELCDIINMNPGQAKDALKIIKKRLGSKNPKIQLLTLFV LETLSKNCGENVFQQIVEREILRDMVKIVKKKPDLNVREKILILIDSWQEALGGPGGRFPQYYA AYNELKGEQFEETVETRRDG(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc04g063280.2_circ_g.4

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