Splice junction sequence |
TCATCATTATGGAAAGACATCTTTTGTGGAGCACAGAACTTTTCTTCATCTTTACCATAGCTTT CATCGCCTTTGGATTTTTTTAGTTATGATGTTTCAGaaagacaatgtgactaatcaacgggagc atgttgttcacctgttggcaaatgaacagtcccgactggggaaactaccagggaatgaaccggt atgcatac
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 705 Transcript exons: 1054762-1054851,1055102-1055199,1055291-1055408,1056745- 1056870,1056959-1057035,1057122-1057200,1057711-1057827 AAAGACAATGTGACTAATCAACGGGAGCATGTTGTTCACCTGTTGGCAAATGAACAGTCCCGAC TGGGGAAACTACCAGGGAATGAACCGAAAATCGACGAGGGAGCTGTGCATGTTGTTTTCTCCAA GTCCCTTGATAACTACATCAAATGGTGTAATTATTTGCCGCTTCCCCCTGTCTGGAACAACACC GAGTCATTGACGAAAGAAAAGAAGTTGCTATATGTGTGCTTATACTACCTTATTTGGGGAGAGG CTGCTAACGTACGATTTCTTCCAGAAGGTTTATGCTATATATTTCATCATCTAGCAAGAGAACT GGAGGAGATTATACGGAGACAGACTGCAGAGCCTGCTGAAAGCTGCATTTCAAATGGTGGCGTA TCATTTCTTGACCAAGTCATTTCTCCTATGTATGAAATCATCGCAGCTGAAGCAGCCAACAATG ACAATGGGCGAGCGCCACATTCTGCGTGGAGAAACTATGATGATTTCAATGAGTTCTTCTGGTC TCCGAAGTGTTTTCAGCTTGGTTGGCCATGGAAGATCAGCAATCCATTTTTCTCTAAACCTAGT AGGAAAGAGAAGGGCTTGGTGGGTAGGAATCATCATTATGGAAAGACATCTTTTGTGGAGCACA GAACTTTTCTTCATCTTTACCATAGCTTTCATCGCCTTTGGATTTTTTTAGTTATGATGTTTCA G
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Genomic sequence |
AAAGACAATGTGACTAATCAACGGGAGCATGTTGTTCACCTGTTGGCAAATGAACAGTCCCGAC TGGGGAAACTACCAGGGAATGAACCGGTATGCATACTTTGCACCCTAATTTTTTATGTCGTACA ATATTTTTTTTGGGGGTAGAATTGGTTCCATGGCATAGAGTGATCCCTATTCTAGATATTTACT GGCAAAAGTTCTGGGTACTTTTTAATACCACTGAAATATTGCACCGTTTAATACCAGGCCTGGT GCAAAGAGTACTCAATTGCATGTTGCTTTATGTTGTTAATATTTTCATCCTTAGTTCGTTAGCA TTGTTGTTATTTGTTGGCAGAAAATCGACGAGGGAGCTGTGCATGTTGTTTTCTCCAAGTCCCT TGATAACTACATCAAATGGTGTAATTATTTGCCGCTTCCCCCTGTCTGGAACAAGTATGATTTG TCATGTTGATCAACATATTTAATTTCTTATTCCTGTCTATATCTTATTTATCACCAAGAGATTT ACCTGATTTTCTCTTAGCACCGAGTCATTGACGAAAGAAAAGAAGTTGCTATATGTGTGCTTAT ACTACCTTATTTGGGGAGAGGCTGCTAACGTACGATTTCTTCCAGAAGGTTTATGCTATATATT TCATCATGTAAGTTTGCAGAAGATTCTGCTCTGTACTATTTTTTGTGCATGCTTAATTGATTAT TGCAAATGTTTACAATCGTGTAGTATTGCACCCAAAGAAGCTTTAGGTCGATCTGCGCCTGTTT TTCTACGAACATGCCTATGCCAGTTTAACATACAAAAATATTCTTCTTTGGTTCTTCCCTCCCT GATCTACTACTTTGTTGCCAAATTAGCGCACTGTTGTCTATGCTTGGAATTTGAATTGTTTTCC CCTAATCATTAGCATATTCTTCATTTTCAGTTTCTAAAGTGATCATGTCTTCTTCTAAGTAAAG AAATCTGCAAAATTCTGTTCATTCTGATGGTCTTCAATTCTTCTCTCTCTGTAGTCACCGATAC TCGAAACACTTCTGGCCAAACTTTTCAAAGATTGACTATCAGTTTCCTTTAAATATTTTGAATT GGAATATGAAAGTCATGTGTAGATTTGTCTGTTTAGAGACAATATAATTTCAATATGTTTTTAT AGCGTATAACAATAGAAATACTGTTCAAAATAATACTTATGAGGCCATTCAGATGTCCAAAATG ACAAATATTTGTGATGTAGGGAATGGTTGTTAGTGTGACATATCCAATTGATATTGAATAACTA ATCACCTTTGACTAACTTAATTTGTATAAGATATCAAATACTACCTCTGAAAATATAAAAAAAA AAGGGCTTGGACACAGGCATTAAAGAAGTAGGTGGAATTAAATAGGGTAAGATTGTGATTGGAT GAGAAAAGGAAGTAGGTGGAGAAATTAAATGGGGGAAGGTTGTGATTAGTTGAGAAGAGAATGT AGGTGTTAGAACTTCAATGGTTACTCTCATTGAGAAGGGGATGGCACTCGAGATGGGGCAATTT TCTGGTTTTCTTCATTCACAAAACACAAAGCCATACCTTCCCGAGGGAGGTTGGATACATATAT ATAACCATAGCTGGCTGCAAGCCTATTGCTGCACCCTCCTAGTCTAAAAATTCGAAATTTGAAT GGGATGCTGTCCTAGAGGGCATCCAAACTGAATAAAGCATAAAGGAGGCATAAAGGAGATGCTA ATTGCTGCTGTCCTACTAACCGCAGCTGTCCTAGCAACTGAAAATATGCTAAAGGAGTAGATGC TGTCCTGAAAAGGTGAAACTACCCAAAAGCAAAAAGAAGAAATCAGGACCAAGGACCAAAGACT TATCCATCAGTAGGCGGAGAAGTTGCTATATTTCGGAACAAAATTTGAATGCTAGAAGTTACTA TATTTTTGGATGGAGGGAATATAACTTTTATTGTTGAAATTCATGCTCCTATATTTCTTACAGC TAGCAAGAGAACTGGAGGAGATTATACGGAGACAGACTGCAGAGCCTGCTGAAAGCTGCATTTC AAATGGTGGCGTATCATTTCTTGACCAAGTCATTTCTCCTATGTATGAAATCATCGCAGCTGTA AGTGGGGTATCTGCTTGGAGCTACTTTAGCTTGCTACATTTGGTTGTACTTCTATTGAGTGGTT TGAATGCTGGGTACTCTACAGGAAGCAGCCAACAATGACAATGGGCGAGCGCCACATTCTGCGT GGAGAAACTATGATGATTTCAATGAGTTCTTCTGGTTGGTAGATCAATTGAGCTATTGAGTTCC ATTAATTTGTTGTTATTTTCATTTTTTTCCATAAAGATCCACACTGTCCTTTTCAGGTCTCCGA AGTGTTTTCAGCTTGGTTGGCCATGGAAGATCAGCAATCCATTTTTCTCTAAACCTAGTAGGAA AGAGAAGGTTTCTTTCTGCTGATCATATACTTAATTGTTTGTATTTTGGCGGAACTACCAAGCT AATACTTGGACATCTCAGGATATCTTTTTTTTTTGTTATTTTTGTTGTGCACATCTTAAACATC ACGTAGTTACTTGGAACACAGGGTTATTCGTGTTGAGGAACCGAGTGCACTACCTATTGAGAAT ATGGTATACTGGGGAAAGTCTTACTAGGTGCAGAAAAGTGACCCCAAAAAAATTACTAGGTTGA TGATCTCAATTACATATGAAGCATTAATTACACAACATGAGTATCATGGATATTGCACTGTAGT TTTGTCCATGGAAGTTCTACAGAACCACCTAAAATTATCTTGCATATATAGGCTATTTGGATTG AGAGATTAGATCATCCATCCATTCAAGATTTTAGTGGGATGGCCCAATTTTCATTTTTCTACAT GTGCTTTTGTGGGATGAGGTGGTGAAGACAACCCTTTCCCCCCTTACCAAACAGATGGTTCTTT TGCAGGGCTTGGTGGGTAGGAATCATCATTATGGAAAGACATCTTTTGTGGAGCACAGAACTTT TCTTCATCTTTACCATAGCTTTCATCGCCTTTGGATTTTTTTAGTTATGATGTTTCAG |