Splice junction sequence |
AAACCGAATTCAAGAGTTAGTGAAATCTTGAAACAGAGAAGAATATCGCGGTTTCACATAATGC TGAATTGCAGACTTTGTGCCTTGCCTCTATAAACTGgttcatggatgcactctataatttactt gacggttctattgacaatacaaagtttgaagatgagtgccgagctatttttggagcacagtcat atgttctt
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Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
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Full-length trsnacripts |
Transcript length: 716 Transcript exons: 3436908-3437046,3437151-3437303,3437381-3437541,3437621- 3437732,3437833-3437983 GTTCATGGATGCACTCTATAATTTACTTGACGGTTCTATTGACAATACAAAGTTTGAAGATGAG TGCCGAGCTATTTTTGGAGCACAGTCATATGTTCTTTTCACATTGGACAAGCTAGTTCAGAAGT TTGTTAAGCATCTCCATTCGGTTGCATCTGATGAAACAGACACCAAGCTTCTGCAACTACATGC GTATGAGAACTACAGAAAACCTGGAAAATTCTTTGATCTAGTGTATCATGAGAATGCATGTGCC CTCCTCCATGAGGCAAACATATACCGGATCAGATATTCATCAGAAGGAACACGTCTCTCGATTC AGCTTATGAACAGTGGGAACAATCAGCTTGAAGTAATGGGTGTAGCGATGGAGCCGGCATTTGC AGATTATCTACAAAATAAATGTCTGAAATCCGTCAATGATGAAGAGAATCACGGACTGTTTCTG AACAGGAACAAAAAGAAATTCACCAGCTTAGATGAATCTAGGGGGATGCCTGTTGCGATGGAAA GATTGAATATTATCAACGAGATGGAATGTAGGATGGCTTGCAGTTCTTCAAAGGTGAAGTACGT AGCAAATACATCAGATCTTTTGTACAGAAGCAAACAGGGGAAACCGAATTCAAGAGTTAGTGAA ATCTTGAAACAGAGAAGAATATCGCGGTTTCACATAATGCTGAATTGCAGACTTTGTGCCTTGC CTCTATAAACTG
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Genomic sequence |
GTTCATGGATGCACTCTATAATTTACTTGACGGTTCTATTGACAATACAAAGTTTGAAGATGAG TGCCGAGCTATTTTTGGAGCACAGTCATATGTTCTTTTCACATTGGACAAGCTAGTTCAGAAGT TTGTTAAGCATGTAAGCAAAACTAGTGTCTTGTCTTCTTGACTCTCTACTTCCATTCTCTCTTT TATTTCTCTCTTTCCTCTGATCATTTGGGATGGTTTGTGGATACGCTTCAGCTCCATTCGGTTG CATCTGATGAAACAGACACCAAGCTTCTGCAACTACATGCGTATGAGAACTACAGAAAACCTGG AAAATTCTTTGATCTAGTGTATCATGAGAATGCATGTGCCCTCCTCCATGAGGCAAACATATAC CGGATCAGATATGTAGGTTTCTCTTAACTACGCATATATGTCCATTCAAATTCCGTAATTTATT AATACTACTTTGGAACTGATTGCAGTCATCAGAAGGAACACGTCTCTCGATTCAGCTTATGAAC AGTGGGAACAATCAGCTTGAAGTAATGGGTGTAGCGATGGAGCCGGCATTTGCAGATTATCTAC AAAATAAATGTCTGAAATCCGTCAATGATGAAGAGAATCACGGACTGTTTCTGAACAGGTGACT GAAGCATGATAAGAGCGTATTGGTATATATATTCTTTTGGTTGTGAAGTAACGTATAACTAAAC TCTCTGCAGGAACAAAAAGAAATTCACCAGCTTAGATGAATCTAGGGGGATGCCTGTTGCGATG GAAAGATTGAATATTATCAACGAGATGGAATGTAGGATGGCTTGCAGTTCTTCAAAGGTACAAC ATATAATGAAATTCTCTTTGCAAGACTTGCAGTCTGAAATGTATATATGTGGATGACTGAAACT TACTTTTCCCAATGATTCAACTGCTGTAGGTGAAGTACGTAGCAAATACATCAGATCTTTTGTA CAGAAGCAAACAGGGGAAACCGAATTCAAGAGTTAGTGAAATCTTGAAACAGAGAAGAATATCG CGGTTTCACATAATGCTGAATTGCAGACTTTGTGCCTTGCCTCTATAAACTG |