Plant Circular RNA Database

Detail information of orai.006G054600_circ_g.2

			
						 General Information
					
						CircRNA Name
						orai.006G054600_circ_g.2
					
						ID in PlantcircBase
						gra_circ_000575
					
						Alias
						Chr06:20000766|20003927
					
						Organism
						
							Gossypium raimondii						
					
						Position
						
							chrChr06: 20000766-20003927  JBrowse»						
					
						Reference genome
						
							Graimondii_221						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Gorai.006G054600						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							orai.006G054600_circ_g.1 						
					
						Support reads
						2
					
						Tissues
						ovule
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Gorai.006G054600.1:6

General Information
CircRNA Name	orai.006G054600_circ_g.2
ID in PlantcircBase	gra_circ_000575
Alias	Chr06:20000766\|20003927
Organism	Gossypium raimondii
Position	chrChr06: 20000766-20003927 JBrowse»
Reference genome	Graimondii_221
Type	e-circRNA
Identification method	CIRI
Parent gene	Gorai.006G054600
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	orai.006G054600_circ_g.1
Support reads	2
Tissues	ovule
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Gorai.006G054600.1:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CAATCAGATTCTGAAAGTTGTCATTGAGGTGTTGGACGATCCTGATTCTTCAACCCGGGAATTG
ACCTTGCAGTTAGTAGCTGACATGGTGAACAAACAGgtacggtcaaatgctcgtcgttgctaca
gactgttcaagaaaacttggccagagcgttctcagcaactatttctgtcctttgattcagtcgt
ccaaaggg

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 2310
Transcript exons: 20000766-20000864,20000960-20001320,20001450-20001557,20
001647-20003187,20003357-20003452,20003823-20003927
GTACGGTCAAATGCTCGTCGTTGCTACAGACTGTTCAAGAAAACTTGGCCAGAGCGTTCTCAGC
AACTATTTCTGTCCTTTGATTCAGTCGTCCAAAGGATGATAAACGATGAAGATGGGACCACGCA
TAGACGCCATCCTTCTCCTTCAGTTCGAGTAAGGGATGTCCGTAAATCCCATAAGGCTTTTCAA
GCACCTACTTCTACAACTTTACCTGGACCTGCAACTTCAGCAGTTACCACAGTGGATCGGAATA
GGGCTGTAGCAGGAGGCATTCCTCTATCTGCTGGTCCATTTCTCTCTGAAGTAAAGTCGCATCG
AAATGGTACTGAAAGAAGTTTTGAAAACATGCCGCATGCAAACAAACAGCGGGCTCCAGCTATC
GAAAATGCGCTTGCTGGTTTAAATCTATCTGAGAAACTCAGTTATCAAAAGAAGCGGTCAGCTA
GCTTTGATTTAGGAGTTGACCCTCCTCCAGCTTGTGGCCTCTCATTTCCCCCTATTGTCGCTGC
TTCAGCTGTTACTGCAAATGCTATTTTTACTGACTCAACTGCGTCAACCGTTAAAGCTTGTTTG
TCATCGAAATCAGGGAAGCAAGCTTGTGGTTTTATGGAAGAGCATTCTGATGATAGGTTTGCCC
GGAAATCCGTAGATAAGCATATTGACAAACAGTATGTAGAGACTTCTTCAAAAGATGCCAATTT
TAGGGACTTCCAAGGTAATATTATTCCAAACTTCCAGAGGCCGCTTTTAAGAAAGAACATTTCA
ACTCGAGTTTCTGGAAGCAGTAGAAGCTTTCTAGATGACAATCAGATACTACTTAGTGAAACGT
CAAACTATGTGGATGGCCCAGCATCACTCCAGGAGGCTCTGACAGAGGGTCTCAGTCCAAATTC
CAATTGGTCCGCTAGAGTTGCGGCTTTTAATTATGTCCGAAGTCTGCTGCAGCAGGACCAAAAA
GGCGTGCAAGAAGTTGCACAGAATTTTGAGAAAGTCATGAAGTTGTTTTTCCAACACTTGGATG
ATCCACACCATAAAGTTGCACACGCCGCTCTCTCGGCCCTTGCAGATATAATTTCAGCATGTAG
AAAGCCTTTTGAAAGTTACTTGGATCGAATCTTACACCATGTGTTTTCAAGGTTAATTGATCCG
AAGGAATCAGTTCGGCAGCTTTCTGTAATGAATCTGGAAGTTGTAAGCAAAGCCTATGGCATAG
ATTCTCTTTTACCAGCTTTGCTCCGCGCATTAGATGAACAGAGATCACCGAAGGCAAAACTGGC
TGTTATAGAATATGCTATCAGTTCCTTCAAGAAGAATGCTATGAATTCAGACGGTGCTGCTAAT
AGCGGCATTCTAAAGCTGTGGATTGCTAAATTAATACCTTTGATCTATGATAAAAACACAAAAC
TAAAAGAAGCAGCCATCTCCTGCATTGTATCCGTACATACTCACTATGACTCCACTGGTGTTAT
AAACTACATCATGTGTATGTCAGCTGAAGAGCAAAATTCTCTAAGGCGAATTCTTAGGCAGCAA
ACTCCTCGAATTGAAATGGATCTTATGAACTTCTTGCAGAACAAGAGAGAAAGACCCCGTCCTA
GAAACAGTCACGAGCCATCTGATGTCGGACTTTCTCCTGATGGTGAATATACTGGTGCATTGAA
GAAGGCTTACTATTTTGGAAGATATTCTTCGGGTTCGAATGATATCGATAACAGCAAGAAGTTG
TTCTCCATGCAAGAACCGATGCAAGTTTTAGAACCTATTGCTCAAAAAGTATCAAGTGAAGCTC
AGAAAAATTTACCTCAGAATCTCGAAGGTGGCTCTAATAATGCTTTTACTTGCACTACTACTGG
TGCTGATGAAAATATGGAATCCCCAATGAGCCATCCTGATGGTGTTGATTGTGAGAATTCAATG
AACAACGACTGGCCTTCGTCATGTTCTGACATGAATACAATGACAATCTCTAATCATTTTGGAG
TAAGCAATTCCAATGTTGGTATTGACACTTTTGTTGATGTCAATAATAGTCATGAGAATTCCAG
CAATACCAAGACTTTCTCTTCTCTAAAATCGCGTATCATCATTCCTCAAATTCTTCACCAGATT
TCTAACAATAAGGAGAGTGCAACCATTAGACAGCAAGCACTTCAGCAGCTCATAGAAGCTTCCA
TGGATACAAACCTTTTGATATGGACAAAGCATTTCAATCAGATTCTGAAAGTTGTCATTGAGGT
GTTGGACGATCCTGATTCTTCAACCCGGGAATTGACCTTGCAGTTAGTAGCTGACATGGTGAAC
AAACAG
						
					

						Genomic sequence
						
							GTACGGTCAAATGCTCGTCGTTGCTACAGACTGTTCAAGAAAACTTGGCCAGAGCGTTCTCAGC
AACTATTTCTGTCCTTTGATTCAGTCGTCCAAAGGGTATAAGCTTTCTTTTTTTATTTTTTTGA
ATTTCCAGTTTTGATTGATTGGGTAAATTATATAGTTTTTTTTTTTTTTTTTTGTAAATTAAAA
AGATGATAAACGATGAAGATGGGACCACGCATAGACGCCATCCTTCTCCTTCAGTTCGAGTAAG
GGATGTCCGTAAATCCCATAAGGCTTTTCAAGCACCTACTTCTACAACTTTACCTGGACCTGCA
ACTTCAGCAGTTACCACAGTGGATCGGAATAGGGCTGTAGCAGGAGGCATTCCTCTATCTGCTG
GTCCATTTCTCTCTGAAGTAAAGTCGCATCGAAATGGTACTGAAAGAAGTTTTGAAAACATGCC
GCATGCAAACAAACAGCGGGCTCCAGCTATCGAAAATGCGCTTGCTGGTTTAAATCTATCTGAG
AAACTCAGTTATCAAAAGAAGCGGTCAGCTAGCTTTGATTTAGGTATATGCTAAGTAGCTCAAA
AAATCCATTGAGAGCTTTTAGTAACTGTCACATTCATCAAGCAAGTGCTTCCTTTGCTACTTTG
TTCCTTGACATGGATGAAAATTTTCTTTGTGGTTCCTAGTGCAGGAGTTGACCCTCCTCCAGCT
TGTGGCCTCTCATTTCCCCCTATTGTCGCTGCTTCAGCTGTTACTGCAAATGCTATTTTTACTG
ACTCAACTGCGTCAACCGTTAAAGGTAGGAGTTCTTTTGTCCATTTTATATGCAATTCCAAGCT
TGAAGACTCTTTTCTCACTGCTTTAAGCTAACCATTGAATCTTTTTTAGCTTGTTTGTCATCGA
AATCAGGGAAGCAAGCTTGTGGTTTTATGGAAGAGCATTCTGATGATAGGTTTGCCCGGAAATC
CGTAGATAAGCATATTGACAAACAGTATGTAGAGACTTCTTCAAAAGATGCCAATTTTAGGGAC
TTCCAAGGTAATATTATTCCAAACTTCCAGAGGCCGCTTTTAAGAAAGAACATTTCAACTCGAG
TTTCTGGAAGCAGTAGAAGCTTTCTAGATGACAATCAGATACTACTTAGTGAAACGTCAAACTA
TGTGGATGGCCCAGCATCACTCCAGGAGGCTCTGACAGAGGGTCTCAGTCCAAATTCCAATTGG
TCCGCTAGAGTTGCGGCTTTTAATTATGTCCGAAGTCTGCTGCAGCAGGACCAAAAAGGCGTGC
AAGAAGTTGCACAGAATTTTGAGAAAGTCATGAAGTTGTTTTTCCAACACTTGGATGATCCACA
CCATAAAGTTGCACACGCCGCTCTCTCGGCCCTTGCAGATATAATTTCAGCATGTAGAAAGCCT
TTTGAAAGTTACTTGGATCGAATCTTACACCATGTGTTTTCAAGGTTAATTGATCCGAAGGAAT
CAGTTCGGCAGCTTTCTGTAATGAATCTGGAAGTTGTAAGCAAAGCCTATGGCATAGATTCTCT
TTTACCAGCTTTGCTCCGCGCATTAGATGAACAGAGATCACCGAAGGCAAAACTGGCTGTTATA
GAATATGCTATCAGTTCCTTCAAGAAGAATGCTATGAATTCAGACGGTGCTGCTAATAGCGGCA
TTCTAAAGCTGTGGATTGCTAAATTAATACCTTTGATCTATGATAAAAACACAAAACTAAAAGA
AGCAGCCATCTCCTGCATTGTATCCGTACATACTCACTATGACTCCACTGGTGTTATAAACTAC
ATCATGTGTATGTCAGCTGAAGAGCAAAATTCTCTAAGGCGAATTCTTAGGCAGCAAACTCCTC
GAATTGAAATGGATCTTATGAACTTCTTGCAGAACAAGAGAGAAAGACCCCGTCCTAGAAACAG
TCACGAGCCATCTGATGTCGGACTTTCTCCTGATGGTGAATATACTGGTGCATTGAAGAAGGCT
TACTATTTTGGAAGATATTCTTCGGGTTCGAATGATATCGATAACAGCAAGAAGTTGTTCTCCA
TGCAAGAACCGATGCAAGTTTTAGAACCTATTGCTCAAAAAGTATCAAGTGAAGCTCAGAAAAA
TTTACCTCAGAATCTCGAAGGTGGCTCTAATAATGCTTTTACTTGCACTACTACTGGTGCTGAT
GAAAATATGGAATCCCCAATGAGCCATCCTGATGGTGTTGATTGTGAGAATTCAATGAACAACG
ACTGGCCTTCGTCATGTTCTGACATGAATACAATGACAATCTCTAATCATTTTGGAGTAAGCAA
TTCCAATGTTGGTATTGACACTTTTGTTGATGTCAATAATAGTCATGAGAATTCCAGCAATACC
AAGACTTTCTCTTCTCTAAAATCGCGTATCATCATTCCTCAAATTCTTCACCAGGTGAACTATG
AATGTTAAAAGGTCCCCTTCGTTAGCCCCCCCCCCCCCCTTTTTCTTGTCCCTCACTGTGAAAA
TCATATTTTATCTGAGTAATTTGTTTTCCCTTTTTGTTTTATTGTCTAGAAAGGAATAAACTCA
TTTCTGTATTCCGACTCTCCACATTTTTCAGATTTCTAACAATAAGGAGAGTGCAACCATTAGA
CAGCAAGCACTTCAGCAGCTCATAGAAGCTTCCATGGATACAAACCTTTTGATATGGACAAAGG
TATAATCTAATTAAAATTAATGATACTCATTCCCAGGATACAAACCATTCAATATGGACATAAG
TTACCATGTTTAAGATCTCCACTGTCAAAGATGTTGTCCAACACATATACACATGGATGGAGTT
GGACATGAAAACATAAATAGTATGTTAATTGCCATTTATGTTTATGAAGAATTTGATTTTCCAA
GACATTGACCAAAAATCAGTTTTCAAACCTATGCTAAAAGTTACCATAGACGTAATGGCATGCA
CGAGGGAGACAGATCTAATAGTTTGATGGATGGTATCTTAACCAGTAATGGCCGACTGTTATCA
AGTGATAGCAGCAATATGCTGATGCTGGTGGACGATTATTTATTTGCAGCATTTCAATCAGATT
CTGAAAGTTGTCATTGAGGTGTTGGACGATCCTGATTCTTCAACCCGGGAATTGACCTTGCAGT
TAGTAGCTGACATGGTGAACAAACAG
						
					

			
		

Sequences
Splice junction sequence	CAATCAGATTCTGAAAGTTGTCATTGAGGTGTTGGACGATCCTGATTCTTCAACCCGGGAATTG ACCTTGCAGTTAGTAGCTGACATGGTGAACAAACAGgtacggtcaaatgctcgtcgttgctaca gactgttcaagaaaacttggccagagcgttctcagcaactatttctgtcctttgattcagtcgt ccaaaggg
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 2310 Transcript exons: 20000766-20000864,20000960-20001320,20001450-20001557,20 001647-20003187,20003357-20003452,20003823-20003927 GTACGGTCAAATGCTCGTCGTTGCTACAGACTGTTCAAGAAAACTTGGCCAGAGCGTTCTCAGC AACTATTTCTGTCCTTTGATTCAGTCGTCCAAAGGATGATAAACGATGAAGATGGGACCACGCA TAGACGCCATCCTTCTCCTTCAGTTCGAGTAAGGGATGTCCGTAAATCCCATAAGGCTTTTCAA GCACCTACTTCTACAACTTTACCTGGACCTGCAACTTCAGCAGTTACCACAGTGGATCGGAATA GGGCTGTAGCAGGAGGCATTCCTCTATCTGCTGGTCCATTTCTCTCTGAAGTAAAGTCGCATCG AAATGGTACTGAAAGAAGTTTTGAAAACATGCCGCATGCAAACAAACAGCGGGCTCCAGCTATC GAAAATGCGCTTGCTGGTTTAAATCTATCTGAGAAACTCAGTTATCAAAAGAAGCGGTCAGCTA GCTTTGATTTAGGAGTTGACCCTCCTCCAGCTTGTGGCCTCTCATTTCCCCCTATTGTCGCTGC TTCAGCTGTTACTGCAAATGCTATTTTTACTGACTCAACTGCGTCAACCGTTAAAGCTTGTTTG TCATCGAAATCAGGGAAGCAAGCTTGTGGTTTTATGGAAGAGCATTCTGATGATAGGTTTGCCC GGAAATCCGTAGATAAGCATATTGACAAACAGTATGTAGAGACTTCTTCAAAAGATGCCAATTT TAGGGACTTCCAAGGTAATATTATTCCAAACTTCCAGAGGCCGCTTTTAAGAAAGAACATTTCA ACTCGAGTTTCTGGAAGCAGTAGAAGCTTTCTAGATGACAATCAGATACTACTTAGTGAAACGT CAAACTATGTGGATGGCCCAGCATCACTCCAGGAGGCTCTGACAGAGGGTCTCAGTCCAAATTC CAATTGGTCCGCTAGAGTTGCGGCTTTTAATTATGTCCGAAGTCTGCTGCAGCAGGACCAAAAA GGCGTGCAAGAAGTTGCACAGAATTTTGAGAAAGTCATGAAGTTGTTTTTCCAACACTTGGATG ATCCACACCATAAAGTTGCACACGCCGCTCTCTCGGCCCTTGCAGATATAATTTCAGCATGTAG AAAGCCTTTTGAAAGTTACTTGGATCGAATCTTACACCATGTGTTTTCAAGGTTAATTGATCCG AAGGAATCAGTTCGGCAGCTTTCTGTAATGAATCTGGAAGTTGTAAGCAAAGCCTATGGCATAG ATTCTCTTTTACCAGCTTTGCTCCGCGCATTAGATGAACAGAGATCACCGAAGGCAAAACTGGC TGTTATAGAATATGCTATCAGTTCCTTCAAGAAGAATGCTATGAATTCAGACGGTGCTGCTAAT AGCGGCATTCTAAAGCTGTGGATTGCTAAATTAATACCTTTGATCTATGATAAAAACACAAAAC TAAAAGAAGCAGCCATCTCCTGCATTGTATCCGTACATACTCACTATGACTCCACTGGTGTTAT AAACTACATCATGTGTATGTCAGCTGAAGAGCAAAATTCTCTAAGGCGAATTCTTAGGCAGCAA ACTCCTCGAATTGAAATGGATCTTATGAACTTCTTGCAGAACAAGAGAGAAAGACCCCGTCCTA GAAACAGTCACGAGCCATCTGATGTCGGACTTTCTCCTGATGGTGAATATACTGGTGCATTGAA GAAGGCTTACTATTTTGGAAGATATTCTTCGGGTTCGAATGATATCGATAACAGCAAGAAGTTG TTCTCCATGCAAGAACCGATGCAAGTTTTAGAACCTATTGCTCAAAAAGTATCAAGTGAAGCTC AGAAAAATTTACCTCAGAATCTCGAAGGTGGCTCTAATAATGCTTTTACTTGCACTACTACTGG TGCTGATGAAAATATGGAATCCCCAATGAGCCATCCTGATGGTGTTGATTGTGAGAATTCAATG AACAACGACTGGCCTTCGTCATGTTCTGACATGAATACAATGACAATCTCTAATCATTTTGGAG TAAGCAATTCCAATGTTGGTATTGACACTTTTGTTGATGTCAATAATAGTCATGAGAATTCCAG CAATACCAAGACTTTCTCTTCTCTAAAATCGCGTATCATCATTCCTCAAATTCTTCACCAGATT TCTAACAATAAGGAGAGTGCAACCATTAGACAGCAAGCACTTCAGCAGCTCATAGAAGCTTCCA TGGATACAAACCTTTTGATATGGACAAAGCATTTCAATCAGATTCTGAAAGTTGTCATTGAGGT GTTGGACGATCCTGATTCTTCAACCCGGGAATTGACCTTGCAGTTAGTAGCTGACATGGTGAAC AAACAG
Genomic sequence	GTACGGTCAAATGCTCGTCGTTGCTACAGACTGTTCAAGAAAACTTGGCCAGAGCGTTCTCAGC AACTATTTCTGTCCTTTGATTCAGTCGTCCAAAGGGTATAAGCTTTCTTTTTTTATTTTTTTGA ATTTCCAGTTTTGATTGATTGGGTAAATTATATAGTTTTTTTTTTTTTTTTTTGTAAATTAAAA AGATGATAAACGATGAAGATGGGACCACGCATAGACGCCATCCTTCTCCTTCAGTTCGAGTAAG GGATGTCCGTAAATCCCATAAGGCTTTTCAAGCACCTACTTCTACAACTTTACCTGGACCTGCA ACTTCAGCAGTTACCACAGTGGATCGGAATAGGGCTGTAGCAGGAGGCATTCCTCTATCTGCTG GTCCATTTCTCTCTGAAGTAAAGTCGCATCGAAATGGTACTGAAAGAAGTTTTGAAAACATGCC GCATGCAAACAAACAGCGGGCTCCAGCTATCGAAAATGCGCTTGCTGGTTTAAATCTATCTGAG AAACTCAGTTATCAAAAGAAGCGGTCAGCTAGCTTTGATTTAGGTATATGCTAAGTAGCTCAAA AAATCCATTGAGAGCTTTTAGTAACTGTCACATTCATCAAGCAAGTGCTTCCTTTGCTACTTTG TTCCTTGACATGGATGAAAATTTTCTTTGTGGTTCCTAGTGCAGGAGTTGACCCTCCTCCAGCT TGTGGCCTCTCATTTCCCCCTATTGTCGCTGCTTCAGCTGTTACTGCAAATGCTATTTTTACTG ACTCAACTGCGTCAACCGTTAAAGGTAGGAGTTCTTTTGTCCATTTTATATGCAATTCCAAGCT TGAAGACTCTTTTCTCACTGCTTTAAGCTAACCATTGAATCTTTTTTAGCTTGTTTGTCATCGA AATCAGGGAAGCAAGCTTGTGGTTTTATGGAAGAGCATTCTGATGATAGGTTTGCCCGGAAATC CGTAGATAAGCATATTGACAAACAGTATGTAGAGACTTCTTCAAAAGATGCCAATTTTAGGGAC TTCCAAGGTAATATTATTCCAAACTTCCAGAGGCCGCTTTTAAGAAAGAACATTTCAACTCGAG TTTCTGGAAGCAGTAGAAGCTTTCTAGATGACAATCAGATACTACTTAGTGAAACGTCAAACTA TGTGGATGGCCCAGCATCACTCCAGGAGGCTCTGACAGAGGGTCTCAGTCCAAATTCCAATTGG TCCGCTAGAGTTGCGGCTTTTAATTATGTCCGAAGTCTGCTGCAGCAGGACCAAAAAGGCGTGC AAGAAGTTGCACAGAATTTTGAGAAAGTCATGAAGTTGTTTTTCCAACACTTGGATGATCCACA CCATAAAGTTGCACACGCCGCTCTCTCGGCCCTTGCAGATATAATTTCAGCATGTAGAAAGCCT TTTGAAAGTTACTTGGATCGAATCTTACACCATGTGTTTTCAAGGTTAATTGATCCGAAGGAAT CAGTTCGGCAGCTTTCTGTAATGAATCTGGAAGTTGTAAGCAAAGCCTATGGCATAGATTCTCT TTTACCAGCTTTGCTCCGCGCATTAGATGAACAGAGATCACCGAAGGCAAAACTGGCTGTTATA GAATATGCTATCAGTTCCTTCAAGAAGAATGCTATGAATTCAGACGGTGCTGCTAATAGCGGCA TTCTAAAGCTGTGGATTGCTAAATTAATACCTTTGATCTATGATAAAAACACAAAACTAAAAGA AGCAGCCATCTCCTGCATTGTATCCGTACATACTCACTATGACTCCACTGGTGTTATAAACTAC ATCATGTGTATGTCAGCTGAAGAGCAAAATTCTCTAAGGCGAATTCTTAGGCAGCAAACTCCTC GAATTGAAATGGATCTTATGAACTTCTTGCAGAACAAGAGAGAAAGACCCCGTCCTAGAAACAG TCACGAGCCATCTGATGTCGGACTTTCTCCTGATGGTGAATATACTGGTGCATTGAAGAAGGCT TACTATTTTGGAAGATATTCTTCGGGTTCGAATGATATCGATAACAGCAAGAAGTTGTTCTCCA TGCAAGAACCGATGCAAGTTTTAGAACCTATTGCTCAAAAAGTATCAAGTGAAGCTCAGAAAAA TTTACCTCAGAATCTCGAAGGTGGCTCTAATAATGCTTTTACTTGCACTACTACTGGTGCTGAT GAAAATATGGAATCCCCAATGAGCCATCCTGATGGTGTTGATTGTGAGAATTCAATGAACAACG ACTGGCCTTCGTCATGTTCTGACATGAATACAATGACAATCTCTAATCATTTTGGAGTAAGCAA TTCCAATGTTGGTATTGACACTTTTGTTGATGTCAATAATAGTCATGAGAATTCCAGCAATACC AAGACTTTCTCTTCTCTAAAATCGCGTATCATCATTCCTCAAATTCTTCACCAGGTGAACTATG AATGTTAAAAGGTCCCCTTCGTTAGCCCCCCCCCCCCCCTTTTTCTTGTCCCTCACTGTGAAAA TCATATTTTATCTGAGTAATTTGTTTTCCCTTTTTGTTTTATTGTCTAGAAAGGAATAAACTCA TTTCTGTATTCCGACTCTCCACATTTTTCAGATTTCTAACAATAAGGAGAGTGCAACCATTAGA CAGCAAGCACTTCAGCAGCTCATAGAAGCTTCCATGGATACAAACCTTTTGATATGGACAAAGG TATAATCTAATTAAAATTAATGATACTCATTCCCAGGATACAAACCATTCAATATGGACATAAG TTACCATGTTTAAGATCTCCACTGTCAAAGATGTTGTCCAACACATATACACATGGATGGAGTT GGACATGAAAACATAAATAGTATGTTAATTGCCATTTATGTTTATGAAGAATTTGATTTTCCAA GACATTGACCAAAAATCAGTTTTCAAACCTATGCTAAAAGTTACCATAGACGTAATGGCATGCA CGAGGGAGACAGATCTAATAGTTTGATGGATGGTATCTTAACCAGTAATGGCCGACTGTTATCA AGTGATAGCAGCAATATGCTGATGCTGGTGGACGATTATTTATTTGCAGCATTTCAATCAGATT CTGAAAGTTGTCATTGAGGTGTTGGACGATCCTGATTCTTCAACCCGGGAATTGACCTTGCAGT TAGTAGCTGACATGGTGAACAAACAG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.762961193

Conservation Information
Conserved circRNAs	NA
PMCS	0.762961193

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							20000960-20003924(+)
						
					

						Potential amino acid sequence
						
							MINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGGIPLSAG
PFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGVDPPPAC
GLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDKHIDKQY
VETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDGPASLQE
ALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKVAHAALS
ALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALLRALD
EQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISCIVSV
HTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSDVGLS
PDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNLEGGS
NNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNVGIDTFV
DVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLLIWTKHF
NQILKVVIEVLDDPDSSTRELTLQLVADMVNKQVRSNARRCYRLFKKTWPERSQQLFLSFDSVV
QRMINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGGIPLS
AGPFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGVDPPP
ACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDKHIDK
QYVETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDGPASL
QEALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKVAHAA
LSALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALLRA
LDEQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISCIV
SVHTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSDVG
LSPDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNLEG
GSNNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNVGIDT
FVDVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLLIWTK
HFNQILKVVIEVLDDPDSSTRELTLQLVADMVNKQVRSNARRCYRLFKKTWPERSQQLFLSFDS
VVQRMINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGGIP
LSAGPFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGVDP
PPACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDKHI
DKQYVETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDGPA
SLQEALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKVAH
AALSALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALL
RALDEQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISC
IVSVHTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSD
VGLSPDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNL
EGGSNNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNVGI
DTFVDVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLLIW
TKHFNQILKVVIEVLDDPDSSTRELTLQLVADMVNKQVRSNARRCYRLFKKTWPERSQQLFLSF
DSVVQRMINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGG
IPLSAGPFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGV
DPPPACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDK
HIDKQYVETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDG
PASLQEALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKV
AHAALSALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPA
LLRALDEQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAI
SCIVSVHTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEP
SDVGLSPDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQ
NLEGGSNNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNV
GIDTFVDVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLL
IWTKHFNQILKVVIEVLDDPDSSTRELTLQLVADMVNKQ(+)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						NA
					

			
		

Functional Information
Coding potential	Y
Potential coding position	20000960-20003924(+)
Potential amino acid sequence	MINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGGIPLSAG PFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGVDPPPAC GLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDKHIDKQY VETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDGPASLQE ALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKVAHAALS ALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALLRALD EQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISCIVSV HTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSDVGLS PDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNLEGGS NNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNVGIDTFV DVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLLIWTKHF NQILKVVIEVLDDPDSSTRELTLQLVADMVNKQVRSNARRCYRLFKKTWPERSQQLFLSFDSVV QRMINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGGIPLS AGPFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGVDPPP ACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDKHIDK QYVETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDGPASL QEALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKVAHAA LSALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALLRA LDEQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISCIV SVHTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSDVG LSPDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNLEG GSNNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNVGIDT FVDVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLLIWTK HFNQILKVVIEVLDDPDSSTRELTLQLVADMVNKQVRSNARRCYRLFKKTWPERSQQLFLSFDS VVQRMINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGGIP LSAGPFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGVDP PPACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDKHI DKQYVETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDGPA SLQEALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKVAH AALSALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPALL RALDEQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAISC IVSVHTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEPSD VGLSPDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQNL EGGSNNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNVGI DTFVDVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLLIW TKHFNQILKVVIEVLDDPDSSTRELTLQLVADMVNKQVRSNARRCYRLFKKTWPERSQQLFLSF DSVVQRMINDEDGTTHRRHPSPSVRVRDVRKSHKAFQAPTSTTLPGPATSAVTTVDRNRAVAGG IPLSAGPFLSEVKSHRNGTERSFENMPHANKQRAPAIENALAGLNLSEKLSYQKKRSASFDLGV DPPPACGLSFPPIVAASAVTANAIFTDSTASTVKACLSSKSGKQACGFMEEHSDDRFARKSVDK HIDKQYVETSSKDANFRDFQGNIIPNFQRPLLRKNISTRVSGSSRSFLDDNQILLSETSNYVDG PASLQEALTEGLSPNSNWSARVAAFNYVRSLLQQDQKGVQEVAQNFEKVMKLFFQHLDDPHHKV AHAALSALADIISACRKPFESYLDRILHHVFSRLIDPKESVRQLSVMNLEVVSKAYGIDSLLPA LLRALDEQRSPKAKLAVIEYAISSFKKNAMNSDGAANSGILKLWIAKLIPLIYDKNTKLKEAAI SCIVSVHTHYDSTGVINYIMCMSAEEQNSLRRILRQQTPRIEMDLMNFLQNKRERPRPRNSHEP SDVGLSPDGEYTGALKKAYYFGRYSSGSNDIDNSKKLFSMQEPMQVLEPIAQKVSSEAQKNLPQ NLEGGSNNAFTCTTTGADENMESPMSHPDGVDCENSMNNDWPSSCSDMNTMTISNHFGVSNSNV GIDTFVDVNNSHENSSNTKTFSSLKSRIIIPQILHQISNNKESATIRQQALQQLIEASMDTNLL IWTKHFNQILKVVIEVLDDPDSSTRELTLQLVADMVNKQ(+)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhao et al., 2017b

circRNA

Detail information of orai.006G054600_circ_g.2

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