Plant Circular RNA Database

Detail information of Solyc08g075390.2_circ_g.2

			
						 General Information
					
						CircRNA Name
						Solyc08g075390.2_circ_g.2
					
						ID in PlantcircBase
						sly_circ_002649
					
						Alias
						NA
					
						Organism
						
							Solanum lycopersicum						
					
						Position
						
							chr8: 59525965-59529636  JBrowse»						
					
						Reference genome
						
							SL2.50.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI
					
						Parent gene
						
							Solyc08g075390.2						
					
						Parent gene annotation
						
							protein_coding
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Solyc08g075390.2_circ_g.1 						
					
						Support reads
						3
					
						Tissues
						fruit
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Solyc08g075390.2.1:6

General Information
CircRNA Name	Solyc08g075390.2_circ_g.2
ID in PlantcircBase	sly_circ_002649
Alias	NA
Organism	Solanum lycopersicum
Position	chr8: 59525965-59529636 JBrowse»
Reference genome	SL2.50.38
Type	e-circRNA
Identification method	CIRI
Parent gene	Solyc08g075390.2
Parent gene annotation	protein_coding
Parent gene strand	-
Alternative splicing	Solyc08g075390.2_circ_g.1
Support reads	3
Tissues	fruit
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Solyc08g075390.2.1:6

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TAAGCAAGGGTAGAATTTCAAAATTTGTTGATACCTTGTATCCAAAAAGTGCATCTTCATAAGT
TTCATACGGGCCAATGGTGACATCCAACTTGGAGTCcttatccattagaaacctaagcgcccaa
agcccaacaatatctgcctttgcttcttctagtgatgaatgaagttcttgcagctcctatacaa
taaggtac

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 600
Transcript exons: 59525965-59526048,59526225-59526393,59526507-59526613,59
528247-59528342,59528426-59528503,59529571-59529636
CTTATCCATTAGAAACCTAAGCGCCCAAAGCCCAACAATATCTGCCTTTGCTTCTTCTAGTGAT
GAATGAAGTTCTTGCAGCTCTAGTCTGACTGTCGACTTCTGCCCATTCGGAAGTGTAATTGTGT
GAGGCCCGATTCCATGGCAGCATTCATGACAAATTGTGTGAGTAAAGAAAGAGTCGAAGTCCAC
AAGCTCTCGTTGTTCTTCCATAATACAGACATCAGCTATAGGCTTAAGGATAAGCTTGAACTTT
GCTTCTGAAACATTCTTAAGCATGACCATTGACGTTCCTCGATCTTTTACTATACGTTCATCAT
TAGGAAGATTAAATGCAACTGTCTGAGGACCCTTCACATCCCCTGCATTGTAGAGAAGCTGAAT
AACCCGGATGGGGGCAGCTGTAACATTTTCTGACTTGTAAATATCGTCTAGAGGAAGATTCTTC
TCCAAAACCTGCAGCTGATCCCCAAACAATTTGAGTTGTGCTGTTGCTTCGTCATCACGAACTC
CTATAAATGCCTCAAATGTTGCCTTGTATCCAAAAAGTGCATCTTCATAAGTTTCATACGGGCC
AATGGTGACATCCAACTTGGAGTC
						
					

						Genomic sequence
						
							CTTATCCATTAGAAACCTAAGCGCCCAAAGCCCAACAATATCTGCCTTTGCTTCTTCTAGTGAT
GAATGAAGTTCTTGCAGCTCCTATACAATAAGGTACAGGAGAATATTATGTCAAAATGACATGA
CAACAGATGAAAAATACAATATTTGAAGAAAAATAATCTGTCTAGAAGCAATCAGATGGAATCT
TATTCTTTAAACAACAACTAGATGAACAAGGACAAAATTTGGAGAAATAAAGCACAGTTAAAAC
TGACTAGTCTGACTGTCGACTTCTGCCCATTCGGAAGTGTAATTGTGTGAGGCCCGATTCCATG
GCAGCATTCATGACAAATTGTGTGAGTAAAGAAAGAGTCGAAGTCCACAAGCTCTCGTTGTTCT
TCCATAATACAGACATCAGCTATAGGCTTAAGGATAAGCTTGAACCTGATCAAAGAACCAGAGG
AATACATTATATAAGCATGTCACAGGTACCTAAAACTGTTTGTTTGATAAGTGACATAGGAAAT
CACAGGAAGGGGAGGAAAACAAATTCTTACTTTGCTTCTGAAACATTCTTAAGCATGACCATTG
ACGTTCCTCGATCTTTTACTATACGTTCATCATTAGGAAGATTAAATGCAACTGTCTGAGGACC
CTTCACATCCTGCCAAAGAAAGGAGTACTTGGATTATTGTAATATTTGGTTGTAGTTACTGTTC
AGTATGCTTTCTGATGCTTTTACCTTGATTATTCTAATTTGGATTGCTTTGGACTATTTTTCTT
GATCCGAGGGTCTATCAGAAACAACCTCTCTACCTATGAGGTAGAGGTAAGGTCCGTATACTTT
ATCCTCCCAGACCACACTTTGTGGGACTAAACTGGGTATGTTATCGCTGTAACCTGAAATGATC
TATTTCCCTTGTACCTCAATTATCATATTGTAGTTTCTGTTCTGTTACTATCTAAATTTTTGTT
ATTATCTGATGTTTCTTGTACTTTTACTTCTTTTTTCTGGACTGTTTTTCCTTGAACCAAGGCT
CTATCGGATAAAGCCTCTCTACCTCTAAAGTAGGGATAAAATCTGTGTACTCTACCCTCTCCAG
AGATCCCACTTTGTGGGACTACACTGGGTATGTTGCTGTTGTTGTCACCTGAAGTGGCCTACAT
ATTGGTCTTTATTCCTACTTTGGTGTAATGTGATTTCACAAGATAGGAATGAGGTGCCAAGTAG
GAACTGGCTGTGCTGAATTGTTGGTAAGAACTAAGAACAGAGAACAATGCTTTTTCAAAAATAA
AATAAAATTAGCATCAGTTCGTGTAAGGCTAACACTAACTTCGTGTGCAGTCAAAAAAAACAAT
TTGCAACTTGTCAAACAAAATATATGTTATACATTGGGTTAGCTTGGAAGTTCCTAATCCAAGT
ATATGTTAAATTGTTCCCATTTCAGCACCTAAGTTTACAGATTTTTTAGCAAAAGAAACAATCT
AGACTCTAGTTTTCAAGGAAAGAAATCCAACTATAGAAGAAATCAAAGAGAGCAATTTTCAGCC
TATTTCTTTTTAAGTGGAGTTAAATAGATTAATGTCATTTGCCTTTGGGAAGTCCAGACATTCT
TTTGGAAGGCATCATCTCGTGATTTTTCCTGACTCTTAACACCTCCCTTCTCGCCCAGACCCAA
CTGGAGCATGGACCAAGCCCAAACGAGGATAAACCTGGCACTGATACCATGTAAAGAACCTAAA
TCTACCTCAAAAGCTAGCTCATAAGGGGAGGATTGCCCAAGTCCATATAAGCAGGACCACCAGT
CCATTCCCCAATACTTTAAAAGCCCACTCTAACAATCAGTAAAAGTATCTTTCCCCTCCATATC
TACCCACTTTTATATGGGAAAAAGCTTGATATTAGATACAGCAAAAATAAAACAAAATAAGATA
AAATTTATCCCTCCCTCCTTTGCATCCCTAAGTCTGCATTGCTTTTCTCCCTTTGTTTCAGTCC
TAACAGTGAGCAATATTGTTCCGCCGCATCCAGCAAAAGAGCAGAGTTCACGAGATTTACTCAG
AAGAAGGCTTGAAAGAATAATCCCATAATTTTGGGACAAAAAACCTTACTTTGTGAAGCCTTGG
TGTACAAAATCACAGACACAAACTCACGGTACATATGTAAGATTTTTATCTGATATTTTCTTCC
CAAAAATGCAGTTTTTGTGAGATGAAGATAAGAAAACATTTGCTTTTAGATGAGTTGCATAAGG
AGAAAAGAAGATTTAAAAGAAAATGTAATAATAGAGACTCACCCCTGCATTGTAGAGAAGCTGA
ATAACCCGGATGGGGGCAGCTGTAACATTTTCTGACTTGTAAATATCGTCTAGAGGAAGATTCT
TCTCCAAAACCTAATATAGCTTATTTTCAGGAAACAGAATAAAAAAGAAATTACAGAGCAAAAG
CTGATCTAGCATGGGAGGTCTATAGGCACCTGCAGCTGATCCCCAAACAATTTGAGTTGTGCTG
TTGCTTCGTCATCACGAACTCCTATAAATGCCTCAAATGTTGCCTAGCAGATAAGATTACATTA
GCTACATGTATCACAAGAAAAATGTACAAGGCCCACATTTCTAATAACAATTTATTGTCAGCAA
GCAAAAGATTTTCATTAATATCAAAGGGAGCCAAACACTAGGACCATGCGGGACATTAAGAAAA
TGATCCATCAGTTACAAGATACTTAAGGTAATGAGATAATGAATCATATAGATCCAGAAGCTTG
GGTCATTTCAAAAAACTCTGGCATATGAGCTGCTTCATGGATACTGACTAGGATAAATCACCTG
TAGAATGGCTATACACGCAAAGTCACGTTCCACAAGATTCTAAATAAAGTGCGCTTCCCGAAAG
AAAACTAAGTGAAAGGCTATGTATAGTATATGTGACTCCCAGAGAGGAAAATGCATGTAGCAAG
CAGTGATTGTTAAATTTATATATACTACGTACTGTATATGCGACTAGATATGATATTAAGTGGA
ATAATGCACCTTTCTTTTATATATGTTTCTAGTTTACTAATCAACTCAATAAATCAAGAATATG
ATATCAGTTTTTTGATAATGATTTTAATATCTCAATCTTGGCCAGCATCCGAAAACCAGCTGAA
CTACTACTTAGTTTTAAAAAAATAAAATATTTTGGAGCAATGTAGTTTTCTATCATACCAAACA
CACCCTTAATTACTTCAATCTTTTTCCTTTCTTTTATATTCTTAGCTGAGGGTTTTTGGTAGAA
TCTCAGAAGAAAAGAGCTAGAGAATAATAAACACGGTGATGAGATGAAGTGATTTATCTGACGT
ATTTGATATGTTATTCACGTCAGGACAAATGAGAAACACATGGAGTGAAGGTGTTTAAAATGTA
CATTCTGATCAAGTTGAGGTGCTATTTGAGAACTATAAATGGTCAGAAATAGAAATCTGTAAAT
GATACTGCATAATGTTTGACCCTCATTATCAAAGGTAAGGCAATGTGGTACTACACCAAATAGT
TAGGTTGAGCATTCTGGATCAAGGAAGAAAATTGAAATCACAGAAGAAATTGTAAGCAAGGGTA
GAATTTCAAAATTTGTTGATACCTTGTATCCAAAAAGTGCATCTTCATAAGTTTCATACGGGCC
AATGGTGACATCCAACTTGGAGTC
						
					

			
		

Sequences
Splice junction sequence	TAAGCAAGGGTAGAATTTCAAAATTTGTTGATACCTTGTATCCAAAAAGTGCATCTTCATAAGT TTCATACGGGCCAATGGTGACATCCAACTTGGAGTCcttatccattagaaacctaagcgcccaa agcccaacaatatctgcctttgcttcttctagtgatgaatgaagttcttgcagctcctatacaa taaggtac
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 600 Transcript exons: 59525965-59526048,59526225-59526393,59526507-59526613,59 528247-59528342,59528426-59528503,59529571-59529636 CTTATCCATTAGAAACCTAAGCGCCCAAAGCCCAACAATATCTGCCTTTGCTTCTTCTAGTGAT GAATGAAGTTCTTGCAGCTCTAGTCTGACTGTCGACTTCTGCCCATTCGGAAGTGTAATTGTGT GAGGCCCGATTCCATGGCAGCATTCATGACAAATTGTGTGAGTAAAGAAAGAGTCGAAGTCCAC AAGCTCTCGTTGTTCTTCCATAATACAGACATCAGCTATAGGCTTAAGGATAAGCTTGAACTTT GCTTCTGAAACATTCTTAAGCATGACCATTGACGTTCCTCGATCTTTTACTATACGTTCATCAT TAGGAAGATTAAATGCAACTGTCTGAGGACCCTTCACATCCCCTGCATTGTAGAGAAGCTGAAT AACCCGGATGGGGGCAGCTGTAACATTTTCTGACTTGTAAATATCGTCTAGAGGAAGATTCTTC TCCAAAACCTGCAGCTGATCCCCAAACAATTTGAGTTGTGCTGTTGCTTCGTCATCACGAACTC CTATAAATGCCTCAAATGTTGCCTTGTATCCAAAAAGTGCATCTTCATAAGTTTCATACGGGCC AATGGTGACATCCAACTTGGAGTC
Genomic sequence	CTTATCCATTAGAAACCTAAGCGCCCAAAGCCCAACAATATCTGCCTTTGCTTCTTCTAGTGAT GAATGAAGTTCTTGCAGCTCCTATACAATAAGGTACAGGAGAATATTATGTCAAAATGACATGA CAACAGATGAAAAATACAATATTTGAAGAAAAATAATCTGTCTAGAAGCAATCAGATGGAATCT TATTCTTTAAACAACAACTAGATGAACAAGGACAAAATTTGGAGAAATAAAGCACAGTTAAAAC TGACTAGTCTGACTGTCGACTTCTGCCCATTCGGAAGTGTAATTGTGTGAGGCCCGATTCCATG GCAGCATTCATGACAAATTGTGTGAGTAAAGAAAGAGTCGAAGTCCACAAGCTCTCGTTGTTCT TCCATAATACAGACATCAGCTATAGGCTTAAGGATAAGCTTGAACCTGATCAAAGAACCAGAGG AATACATTATATAAGCATGTCACAGGTACCTAAAACTGTTTGTTTGATAAGTGACATAGGAAAT CACAGGAAGGGGAGGAAAACAAATTCTTACTTTGCTTCTGAAACATTCTTAAGCATGACCATTG ACGTTCCTCGATCTTTTACTATACGTTCATCATTAGGAAGATTAAATGCAACTGTCTGAGGACC CTTCACATCCTGCCAAAGAAAGGAGTACTTGGATTATTGTAATATTTGGTTGTAGTTACTGTTC AGTATGCTTTCTGATGCTTTTACCTTGATTATTCTAATTTGGATTGCTTTGGACTATTTTTCTT GATCCGAGGGTCTATCAGAAACAACCTCTCTACCTATGAGGTAGAGGTAAGGTCCGTATACTTT ATCCTCCCAGACCACACTTTGTGGGACTAAACTGGGTATGTTATCGCTGTAACCTGAAATGATC TATTTCCCTTGTACCTCAATTATCATATTGTAGTTTCTGTTCTGTTACTATCTAAATTTTTGTT ATTATCTGATGTTTCTTGTACTTTTACTTCTTTTTTCTGGACTGTTTTTCCTTGAACCAAGGCT CTATCGGATAAAGCCTCTCTACCTCTAAAGTAGGGATAAAATCTGTGTACTCTACCCTCTCCAG AGATCCCACTTTGTGGGACTACACTGGGTATGTTGCTGTTGTTGTCACCTGAAGTGGCCTACAT ATTGGTCTTTATTCCTACTTTGGTGTAATGTGATTTCACAAGATAGGAATGAGGTGCCAAGTAG GAACTGGCTGTGCTGAATTGTTGGTAAGAACTAAGAACAGAGAACAATGCTTTTTCAAAAATAA AATAAAATTAGCATCAGTTCGTGTAAGGCTAACACTAACTTCGTGTGCAGTCAAAAAAAACAAT TTGCAACTTGTCAAACAAAATATATGTTATACATTGGGTTAGCTTGGAAGTTCCTAATCCAAGT ATATGTTAAATTGTTCCCATTTCAGCACCTAAGTTTACAGATTTTTTAGCAAAAGAAACAATCT AGACTCTAGTTTTCAAGGAAAGAAATCCAACTATAGAAGAAATCAAAGAGAGCAATTTTCAGCC TATTTCTTTTTAAGTGGAGTTAAATAGATTAATGTCATTTGCCTTTGGGAAGTCCAGACATTCT TTTGGAAGGCATCATCTCGTGATTTTTCCTGACTCTTAACACCTCCCTTCTCGCCCAGACCCAA CTGGAGCATGGACCAAGCCCAAACGAGGATAAACCTGGCACTGATACCATGTAAAGAACCTAAA TCTACCTCAAAAGCTAGCTCATAAGGGGAGGATTGCCCAAGTCCATATAAGCAGGACCACCAGT CCATTCCCCAATACTTTAAAAGCCCACTCTAACAATCAGTAAAAGTATCTTTCCCCTCCATATC TACCCACTTTTATATGGGAAAAAGCTTGATATTAGATACAGCAAAAATAAAACAAAATAAGATA AAATTTATCCCTCCCTCCTTTGCATCCCTAAGTCTGCATTGCTTTTCTCCCTTTGTTTCAGTCC TAACAGTGAGCAATATTGTTCCGCCGCATCCAGCAAAAGAGCAGAGTTCACGAGATTTACTCAG AAGAAGGCTTGAAAGAATAATCCCATAATTTTGGGACAAAAAACCTTACTTTGTGAAGCCTTGG TGTACAAAATCACAGACACAAACTCACGGTACATATGTAAGATTTTTATCTGATATTTTCTTCC CAAAAATGCAGTTTTTGTGAGATGAAGATAAGAAAACATTTGCTTTTAGATGAGTTGCATAAGG AGAAAAGAAGATTTAAAAGAAAATGTAATAATAGAGACTCACCCCTGCATTGTAGAGAAGCTGA ATAACCCGGATGGGGGCAGCTGTAACATTTTCTGACTTGTAAATATCGTCTAGAGGAAGATTCT TCTCCAAAACCTAATATAGCTTATTTTCAGGAAACAGAATAAAAAAGAAATTACAGAGCAAAAG CTGATCTAGCATGGGAGGTCTATAGGCACCTGCAGCTGATCCCCAAACAATTTGAGTTGTGCTG TTGCTTCGTCATCACGAACTCCTATAAATGCCTCAAATGTTGCCTAGCAGATAAGATTACATTA GCTACATGTATCACAAGAAAAATGTACAAGGCCCACATTTCTAATAACAATTTATTGTCAGCAA GCAAAAGATTTTCATTAATATCAAAGGGAGCCAAACACTAGGACCATGCGGGACATTAAGAAAA TGATCCATCAGTTACAAGATACTTAAGGTAATGAGATAATGAATCATATAGATCCAGAAGCTTG GGTCATTTCAAAAAACTCTGGCATATGAGCTGCTTCATGGATACTGACTAGGATAAATCACCTG TAGAATGGCTATACACGCAAAGTCACGTTCCACAAGATTCTAAATAAAGTGCGCTTCCCGAAAG AAAACTAAGTGAAAGGCTATGTATAGTATATGTGACTCCCAGAGAGGAAAATGCATGTAGCAAG CAGTGATTGTTAAATTTATATATACTACGTACTGTATATGCGACTAGATATGATATTAAGTGGA ATAATGCACCTTTCTTTTATATATGTTTCTAGTTTACTAATCAACTCAATAAATCAAGAATATG ATATCAGTTTTTTGATAATGATTTTAATATCTCAATCTTGGCCAGCATCCGAAAACCAGCTGAA CTACTACTTAGTTTTAAAAAAATAAAATATTTTGGAGCAATGTAGTTTTCTATCATACCAAACA CACCCTTAATTACTTCAATCTTTTTCCTTTCTTTTATATTCTTAGCTGAGGGTTTTTGGTAGAA TCTCAGAAGAAAAGAGCTAGAGAATAATAAACACGGTGATGAGATGAAGTGATTTATCTGACGT ATTTGATATGTTATTCACGTCAGGACAAATGAGAAACACATGGAGTGAAGGTGTTTAAAATGTA CATTCTGATCAAGTTGAGGTGCTATTTGAGAACTATAAATGGTCAGAAATAGAAATCTGTAAAT GATACTGCATAATGTTTGACCCTCATTATCAAAGGTAAGGCAATGTGGTACTACACCAAATAGT TAGGTTGAGCATTCTGGATCAAGGAAGAAAATTGAAATCACAGAAGAAATTGTAAGCAAGGGTA GAATTTCAAAATTTGTTGATACCTTGTATCCAAAAAGTGCATCTTCATAAGTTTCATACGGGCC AATGGTGACATCCAACTTGGAGTC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.334848428

Conservation Information
Conserved circRNAs	NA
PMCS	0.334848428

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							59529615-59526031(+)
59526540-59525967(-)
						
						Potential amino acid sequence
						
							MVTSNLESLSIRNLSAQSPTISAFASSSDE*(+)
MVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTHTICHECCHGIGPHTITLPNGQKST
VRLELQELHSSLEEAKADIVGLWALRFLMDKDSKLDVTIGPYETYEDALFGYKATFEAFIGVRD
DEATAQLKLFGDQLQVLEKNLPLDDIYKSENVTAAPIRVIQLLYNAGDVKGPQTVAFNLPNDER
IVKDRGTSMVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTHTICHECCHGIGPHTIT
LPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLMDKDSKLDVTIGPYETYEDALFGYKATF
EAFIGVRDDEATAQLKLFGDQLQVLEKNLPLDDIYKSENVTAAPIRVIQLLYNAGDVKGPQTVA
FNLPNDERIVKDRGTSMVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTHTICHECCH
GIGPHTITLPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLMDKDSKLDVTIGPYETYEDA
LFGYKATFEAFIGVRDDEATAQLKLFGDQLQVLEKNLPLDDIYKSENVTAAPIRVIQLLYNAGD
VKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTH
TICHECCHGIGPHTITLPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLMDK(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	59529615-59526031(+) 59526540-59525967(-)
Potential amino acid sequence	MVTSNLESLSIRNLSAQSPTISAFASSSDE*(+) MVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTHTICHECCHGIGPHTITLPNGQKST VRLELQELHSSLEEAKADIVGLWALRFLMDKDSKLDVTIGPYETYEDALFGYKATFEAFIGVRD DEATAQLKLFGDQLQVLEKNLPLDDIYKSENVTAAPIRVIQLLYNAGDVKGPQTVAFNLPNDER IVKDRGTSMVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTHTICHECCHGIGPHTIT LPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLMDKDSKLDVTIGPYETYEDALFGYKATF EAFIGVRDDEATAQLKLFGDQLQVLEKNLPLDDIYKSENVTAAPIRVIQLLYNAGDVKGPQTVA FNLPNDERIVKDRGTSMVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTHTICHECCH GIGPHTITLPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLMDKDSKLDVTIGPYETYEDA LFGYKATFEAFIGVRDDEATAQLKLFGDQLQVLEKNLPLDDIYKSENVTAAPIRVIQLLYNAGD VKGPQTVAFNLPNDERIVKDRGTSMVMLKNVSEAKFKLILKPIADVCIMEEQRELVDFDSFFTH TICHECCHGIGPHTITLPNGQKSTVRLELQELHSSLEEAKADIVGLWALRFLMDK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zuo et al., 2016

circRNA

Detail information of Solyc08g075390.2_circ_g.2

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