Splice junction sequence |
AAAAATTCAGGTCAAGTATCTTTGATGCTAATGCTGGGATTGGATTAAGCAAGTCCTTCATGAA ACTTGTCTCCTGGTATGACAACGAATGGGGTTACAGgctgttggtaaggtccttccggaactca atggaaaactaacaggaatggccttccgtgtcccaacaccaaatgtctctgttgtggatttaac ttgtcgac
|
Assembled circRNA sequence |
Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
|
Full-length trsnacripts |
Transcript length: 317 Transcript exons: 5576753-5576895,5577005-5577088,5577169-5577258 GCTGTTGGTAAGGTCCTTCCGGAACTCAATGGAAAACTAACAGGAATGGCCTTCCGTGTCCCAA CACCAAATGTCTCTGTTGTGGATTTAACTTGTCGACTTGAGAAGGATGCATCGTATGAAGACGT CAAGGCAGCCATAAAGTTTGCATCAGAAGGACCACTTAGGGGCATTCTTGGATATACAGAAGAA GATGTCGTCTCTAATGATTTTCTTGGAGATTCAAGGTCAAGTATCTTTGATGCTAATGCTGGGA TTGGATTAAGCAAGTCCTTCATGAAACTTGTCTCCTGGTATGACAACGAATGGGGTTACAG
|
Genomic sequence |
GCTGTTGGTAAGGTCCTTCCGGAACTCAATGGAAAACTAACAGGAATGGCCTTCCGTGTCCCAA CACCAAATGTCTCTGTTGTGGATTTAACTTGTCGACTTGAGAAGGATGCATCGTATGAAGACGT CAAGGCAGCCATAAAGTATTACTCTCAAAACCTGTTCAACTAATTTGCGTACCATTCTCTATAC ATGAATAAAACATGGAACTTGTAATAACATCTCATGATTTTGATTTGAAATCTCTAACAGGTTT GCATCAGAAGGACCACTTAGGGGCATTCTTGGATATACAGAAGAAGATGTCGTCTCTAATGATT TTCTTGGAGATTCAAGGTATGTCACTCTTAAATATTGTAGCGGATCATTTAAAATCTTGGTACT CAAAGGTTGTGGCCATTGTCAAAAAAATTCAGGTCAAGTATCTTTGATGCTAATGCTGGGATTG GATTAAGCAAGTCCTTCATGAAACTTGTCTCCTGGTATGACAACGAATGGGGTTACAG |