Detail information of BGIOSGA013767_circ_g.1


General Information
CircRNA Name BGIOSGA013767_circ_g.1
ID in PlantcircBase osi_circ_005188
Alias 3:37995745|37995901
Organism Oryza sativa ssp. indica
Position chr3: 37995745-37995901  JBrowse»
Reference genome Oryza_indica.ASM465v1.42
Type   e-circRNA
Identification method find_circ
Parent gene BGIOSGA013767
Parent gene annotation NA
Parent gene strand +
Alternative splicing BGIOSGA013767_circ_ag.1
Support reads NA
Tissues leaf
Exon boundary   No-No
Splicing signals   CT-AC
Number of exons covered BGIOSGA013767-TA:1
Experimental Information
Sanger sequencing for BSS   NA
PCR primers for BSS    NA
Sanger sequencing for FL    NA
PCR primers for FL    NA
Sequences
Splice junction sequence   AGGGGTTCCTGTCAATGCTAGACAGGGGCTTCTTCAAGTTCGTCGCGCCGTGCACGTTCTACGG
CTCGCCACTTCAGAattcatctcctctacacagttgagttcgacaaggaaggcggcgggccgct
caagatggagatagaggaaaccaacgtcg
Assembled circRNA sequence   NA
Full-length trsnacripts NA
Genomic sequence ATTCATCTCCTCTACACAGTTGAGTTCGACAAGGAAGGCGGCGGGCCGCTCAAGATGGAGATAG
AGGAAACCAACGTCGAGGGGTTCCTGTCAATGCTAGACAGGGGCTTCTTCAAGTTCGTCGCGCC
GTGCACGTTCTACGGCTCGCCACTTCAGA
Conservation Information
Conserved circRNAs NA
PMCS
Functional Information
Coding potential N
Potential coding position NA
Potential amino acid sequence NA
Sponge-miRNAs NA
circRNA-miRNA-mRNA network  VISUALIZATION
Potential function description NA
Other Information
References Huang et al., 2021