Detailed infomation of each circRNA
General Information | |
---|---|
CircRNA Name | AT5G02430_circ_g.1 |
ID in PlantcircBase | ath_circ_035998 |
Alias | 5:528850-529104 |
Organism | Arabidpsis thaliana |
Position | chr5: 528850-529104 JBrowse» |
Reference genome | TAIR10.38 |
Type | e-circRNA |
Identification method | find_circ; CIRI2 |
Parent gene | AT5G02430 |
Parent gene annotation |
Putative uncharacterized protein T22P11_20 |
Parent gene strand | + |
Alternative splicing | NA |
Support reads | 2 |
Tissues | root |
Exon boundary | Yes-Yes |
Splicing signals | GT-AG |
Number of exons covered | AT5G02430.1:2 |
Conservation Information | |
---|---|
Conserved circRNAs | NA |
PMCS | 0.226145196 |
Functional Information | |
---|---|
Coding potential | NA |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
---|---|
References | Philips et al., 2020 |