Plant Circular RNA Database

Detail information of 3_circ_ag.15

			
						 General Information
					
						CircRNA Name
						3_circ_ag.15
					
						ID in PlantcircBase
						ath_circ_022180
					
						Alias
						At_ciR261, AtciR127
					
						Organism
						
							Arabidpsis thaliana						
					
						Position
						
							chr3: 5566863-5572941  JBrowse»						
					
						Reference genome
						
							TAIR10.38						
					
						Type  
						
							ag-circRNA							
									
						Identification method
						CIRI, find_circ, CIRI2
					
						Parent gene
						
							NA						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						NA
					
						Alternative splicing
						
							3_circ_ag.6 3_circ_ag.7 3_circ_ag.8 3_circ_ag.9 3_circ_ag.10 3_circ_ag.11 3_circ_ag.12 AT3G16400_circ_g.1 AT3G16400_circ_g.2 3_circ_ag.3 3_circ_ag.4 AT3G16400_circ_g.5 AT3G16400_circ_g.6 AT3G16400_circ_g.7 AT3G16400_circ_g.8 AT3G16400_circ_g.9 3_circ_ag.10 3_circ_ag.11 AT3G16400_circ_g.12 3_circ_ag.13 3_circ_ag.14 AT3G16410_circ_g.1 AT3G16410_circ_g.2 						
					
						Support reads
						20/1718
					
						Tissues
						leaf/root, leaf, aerial, inflorescences, seed, whole_plant
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						NA

General Information
CircRNA Name	3_circ_ag.15
ID in PlantcircBase	ath_circ_022180
Alias	At_ciR261, AtciR127
Organism	Arabidpsis thaliana
Position	chr3: 5566863-5572941 JBrowse»
Reference genome	TAIR10.38
Type	ag-circRNA
Identification method	CIRI, find_circ, CIRI2
Parent gene	NA
Parent gene annotation	NA
Parent gene strand	NA
Alternative splicing	3_circ_ag.6 3_circ_ag.7 3_circ_ag.8 3_circ_ag.9 3_circ_ag.10 3_circ_ag.11 3_circ_ag.12 AT3G16400_circ_g.1 AT3G16400_circ_g.2 3_circ_ag.3 3_circ_ag.4 AT3G16400_circ_g.5 AT3G16400_circ_g.6 AT3G16400_circ_g.7 AT3G16400_circ_g.8 AT3G16400_circ_g.9 3_circ_ag.10 3_circ_ag.11 AT3G16400_circ_g.12 3_circ_ag.13 3_circ_ag.14 AT3G16410_circ_g.1 AT3G16410_circ_g.2
Support reads	20/1718
Tissues	leaf/root, leaf, aerial, inflorescences, seed, whole_plant
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	NA

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							CCAATATGGTATAGCCTTCGTCAAGTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGAT
GAACATGGAAAGAAGACAGAGCTAGGAGTTGAAGAGtttgagattgatgcggatgactacatcg
tatacgtggaaggttaccgtgagaaagttaacgatatgacgtcagaaatgatcacgtttctttc
tattaaga

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 301
Transcript exons: 5566863-5567134,5567381-5567409
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGG
Transcript length: 302
Transcript exons: 5566863-5567134,5567381-5567410
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGC
Transcript length: 314
Transcript exons: 5566863-5567134,5567381-5567422
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCAC
Transcript length: 317
Transcript exons: 5566863-5567134,5567381-5567425
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATG
Transcript length: 323
Transcript exons: 5566863-5567134,5567381-5567431
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAG
Transcript length: 324
Transcript exons: 5566863-5567134,5567381-5567432
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAGC
Transcript length: 407
Transcript exons: 5566863-5567134,5567381-5567515
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA
CAAACACCTTTACGTCTTTGACC
Transcript length: 417
Transcript exons: 5566863-5567134,5567381-5567525
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA
CAAACACCTTTACGTCTTTGACCTCGAGACCCG
Transcript length: 418
Transcript exons: 5566863-5567134,5567381-5567526
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA
CAAACACCTTTACGTCTTTGACCTCGAGACCCGG
Transcript length: 420
Transcript exons: 5566863-5567134,5567381-5567427,5567449-5567549
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTGA
CCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCAC
Transcript length: 427
Transcript exons: 5566863-5567134,5567381-5567535
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA
CAAACACCTTTACGTCTTTGACCTCGAGACCCGGACTTGGTCC
Transcript length: 542
Transcript exons: 5566863-5567134,5567381-5567549,5567572-5567672
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA
CAAACACCTTTACGTCTTTGACCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCACTGTTTAG
GTGTCCGGATGGTGTCAGTAGGATCGACCCTCTATGTCTTTGGAGGCCGAGACGCTTCACGCCA
ATACAACGGTTTCTACTCGTTTGACACGAC
Transcript length: 556
Transcript exons: 5566863-5567134,5567381-5567454,5572732-5572941
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA
TAGCACAAGTAGGCAACAAGATTTACAATGTAACCCCCTTGAATGCCAAAAAGCTAGAAGCAAA
GGGTGGTGACACGGGAGATATATGGGATGATGGTGTTTACGATAATGTTAGAAAGGTATATGTA
GGGCAAGCCCAATATGGTATAGCCTTCGTCAAGTTTGAGTATGTCAATGGTTCTCAAGTGGTTG
TTGGAGATGAACATGGAAAGAAGACAGAGCTAGGAGTTGAAGAG
Transcript length: 661
Transcript exons: 5566863-5567134,5567337-5567535,5572752-5572941
TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA
TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT
CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT
TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG
GGAAGTGGATTAAGGTCAGATAAATAATTTCTTTAAAAATAACTAAAAAATATTACTCATAGGT
GGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCATAGCACAAGTAGGCAACAAG
ATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTG
ACCTCGAGACCCGGACTTGGTCCCAAAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATAT
GGGATGATGGTGTTTACGATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGC
CTTCGTCAAGTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAG
ACAGAGCTAGGAGTTGAAGAG
						
					

						Genomic sequence
						
							TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.						
					

			
		

Sequences
Splice junction sequence	CCAATATGGTATAGCCTTCGTCAAGTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGAT GAACATGGAAAGAAGACAGAGCTAGGAGTTGAAGAGtttgagattgatgcggatgactacatcg tatacgtggaaggttaccgtgagaaagttaacgatatgacgtcagaaatgatcacgtttctttc tattaaga
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 301 Transcript exons: 5566863-5567134,5567381-5567409 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGG Transcript length: 302 Transcript exons: 5566863-5567134,5567381-5567410 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGC Transcript length: 314 Transcript exons: 5566863-5567134,5567381-5567422 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCAC Transcript length: 317 Transcript exons: 5566863-5567134,5567381-5567425 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATG Transcript length: 323 Transcript exons: 5566863-5567134,5567381-5567431 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAG Transcript length: 324 Transcript exons: 5566863-5567134,5567381-5567432 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAGC Transcript length: 407 Transcript exons: 5566863-5567134,5567381-5567515 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA CAAACACCTTTACGTCTTTGACC Transcript length: 417 Transcript exons: 5566863-5567134,5567381-5567525 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA CAAACACCTTTACGTCTTTGACCTCGAGACCCG Transcript length: 418 Transcript exons: 5566863-5567134,5567381-5567526 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA CAAACACCTTTACGTCTTTGACCTCGAGACCCGG Transcript length: 420 Transcript exons: 5566863-5567134,5567381-5567427,5567449-5567549 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTGA CCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCAC Transcript length: 427 Transcript exons: 5566863-5567134,5567381-5567535 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA CAAACACCTTTACGTCTTTGACCTCGAGACCCGGACTTGGTCC Transcript length: 542 Transcript exons: 5566863-5567134,5567381-5567549,5567572-5567672 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAGCACAAGTAGGCAACAAGATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGA CAAACACCTTTACGTCTTTGACCTCGAGACCCGGACTTGGTCCATTTCTCCAGCCACTGTTTAG GTGTCCGGATGGTGTCAGTAGGATCGACCCTCTATGTCTTTGGAGGCCGAGACGCTTCACGCCA ATACAACGGTTTCTACTCGTTTGACACGAC Transcript length: 556 Transcript exons: 5566863-5567134,5567381-5567454,5572732-5572941 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTAGGTGGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCA TAGCACAAGTAGGCAACAAGATTTACAATGTAACCCCCTTGAATGCCAAAAAGCTAGAAGCAAA GGGTGGTGACACGGGAGATATATGGGATGATGGTGTTTACGATAATGTTAGAAAGGTATATGTA GGGCAAGCCCAATATGGTATAGCCTTCGTCAAGTTTGAGTATGTCAATGGTTCTCAAGTGGTTG TTGGAGATGAACATGGAAAGAAGACAGAGCTAGGAGTTGAAGAG Transcript length: 661 Transcript exons: 5566863-5567134,5567337-5567535,5572752-5572941 TTTGAGATTGATGCGGATGACTACATCGTATACGTGGAAGGTTACCGTGAGAAAGTTAACGATA TGACGTCAGAAATGATCACGTTTCTTTCTATTAAGACTTTTAAAGGCAAAACCTCTCATCCTAT CGAAAAAAGACCTGGGGTTAAGTTTGTGCTACATGGTGGAAAAATCGTTGGGTTTCACGGACGT TCAACAGATGTTTTACACTCCCTTGGGGCCTATGTTTCTTTGTCATCCACTATCAAATTGCTTG GGAAGTGGATTAAGGTCAGATAAATAATTTCTTTAAAAATAACTAAAAAATATTACTCATAGGT GGAGCAAAAAGGAGAAGGTCCAGGGCTAAGATGCTCACATGGCATAGCACAAGTAGGCAACAAG ATTTACTCCTTTGGTGGCGAGTTCACACCAAATCAGCCCATCGACAAACACCTTTACGTCTTTG ACCTCGAGACCCGGACTTGGTCCCAAAAAGCTAGAAGCAAAGGGTGGTGACACGGGAGATATAT GGGATGATGGTGTTTACGATAATGTTAGAAAGGTATATGTAGGGCAAGCCCAATATGGTATAGC CTTCGTCAAGTTTGAGTATGTCAATGGTTCTCAAGTGGTTGTTGGAGATGAACATGGAAAGAAG ACAGAGCTAGGAGTTGAAGAG
Genomic sequence	TOO LONG (>5KB) TO SHOW GENOMIC SEQUENCE OF THIS CIRCULAR RNA. PLEASE FIND THE CORRESPONDING GENOMIC SEQUENCE AT DOWNLOAD SECTION.

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.846705901

Conservation Information
Conserved circRNAs	NA
PMCS	0.846705901

			
						 Functional Information
					
						Coding potential
						N
					
						Potential coding position
						
							NA
						
						Potential amino acid sequence
						
							NA
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						response to drought stress; responsive to methyl jasmonate

Functional Information
Coding potential	N
Potential coding position	NA
Potential amino acid sequence	NA
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	response to drought stress; responsive to methyl jasmonate

			
						 Other Information
					
						References
						Ye et al., 2015;Chu et al., 2017;Zhang et al., 2019

circRNA

Detail information of 3_circ_ag.15

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