Detailed infomation of each circRNA
General Information | |
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CircRNA Name | EPlOSAG00000028023_circ_ig.2 |
ID in PlantcircBase | osa_circ_028444 |
Alias | Os_ciR1690 |
Organism | Oryza sativa |
Position | chr5: 24863463-24863690 JBrowse» |
Reference genome | IRGSP-1.0.38 |
Type | ig-circRNA |
Identification method | find_circ |
Parent gene | NA |
Parent gene annotation | NA |
Parent gene strand | NA |
Alternative splicing | EPlOSAG00000028023_circ_ig.3 |
Support reads | 6 |
Tissues | root |
Exon boundary | No-No |
Splicing signals | GT-AG |
Number of exons covered | NA |
Conservation Information | |
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Conserved circRNAs |
osi_circ_003678 osi_circ_012546 zma_circ_008304* zma_circ_004657 zma_circ_008310* zma_circ_004741 gma_circ_008846 zma_circ_008311* zma_circ_004671 zma_circ_008305* zma_circ_004672 zma_circ_004670 zma_circ_004669 pop_circ_000486 zma_circ_004668 zma_circ_004667 zma_circ_004666 zma_circ_004739 zma_circ_004740 |
PMCS | 1.248960344 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Ye et al., 2015 |