Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G17420_circ_g.5 |
ID in PlantcircBase | ath_circ_003078 |
Alias | NA |
Organism | Arabidpsis thaliana |
Position | chr1: 5978863-5980159 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | PcircRNA_finder |
Parent gene | AT1G17420 |
Parent gene annotation |
Lipoxygenase 3, chloroplastic |
Parent gene strand | + |
Alternative splicing | AT1G17420_circ_g.6 |
Support reads | 8 |
Tissues | whole_plant |
Exon boundary | No-No |
Splicing signals | TA-TA |
Number of exons covered | AT1G17420.1:3 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.138151979 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chu et al., 2017 |