Plant Circular RNA Database

Detail information of Csa3G889910_circ_g.2

			
						 General Information
					
						CircRNA Name
						Csa3G889910_circ_g.2
					
						ID in PlantcircBase
						csa_circ_002195
					
						Alias
						Chr3:37873589_37878142
					
						Organism
						
							Cucumis sativus						
					
						Position
						
							chrChr3: 37873589-37878142  JBrowse»						
					
						Reference genome
						
							Cucumis sativus v1.5						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRI2
					
						Parent gene
						
							Csa3G889910						
					
						Parent gene annotation
						
							NA							
					
						Parent gene strand
						+
					
						Alternative splicing
						
							Csa3G889910_circ_g.1 Csa3G889910_circ_g.3 						
					
						Support reads
						NA
					
						Tissues
						leaf,root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Csa3G889910.1:8

General Information
CircRNA Name	Csa3G889910_circ_g.2
ID in PlantcircBase	csa_circ_002195
Alias	Chr3:37873589_37878142
Organism	Cucumis sativus
Position	chrChr3: 37873589-37878142 JBrowse»
Reference genome	Cucumis sativus v1.5
Type	e-circRNA
Identification method	CIRI2
Parent gene	Csa3G889910
Parent gene annotation	NA
Parent gene strand	+
Alternative splicing	Csa3G889910_circ_g.1 Csa3G889910_circ_g.3
Support reads	NA
Tissues	leaf,root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Csa3G889910.1:8

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATATGCTCCTCCTGGGATTAACCGAGGATTCATTTCAGAATGATATAACTTGGCACGAAAGCAA
TTGGGACAATCCTGAAAGTAAATTTCTTGCCTACACgtgggctgaatggaacggaatataccgt
gacgacatcagaaaatttattaaggtaatgttgagtgggacaaattttatttctttattttctc
tttttttg

									
								

					

						Assembled circRNA sequence  
						
							NA
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							NA						
					

						Genomic sequence
						
							GTGGGCTGAATGGAACGGAATATACCGTGACGACATCAGAAAATTTATTAAGGTAATGTTGAGT
GGGACAAATTTTATTTCTTTATTTTCTCTTTTTTTGTATGAGTCAATGTTGGATCAAATAAGTT
ACTAGGAGGTGCAACCTAGTTGAGATGCCTAAGTGCACCTACTGATCCTAGTTATGCTTTATGC
TCTTTGTGTAACTCTCGTGTACTTAGAGCATTAGTCTCTTTCATCTTATATCTATATGAATAAA
GAGACTTGTTTCCTTCTTTAAAAAAAAAGTTCACGGAGAGGAATTTATTTTCATAATTATATAA
TATTTTTAATTTGAGGCTCTTAATACTTATATAATTTTGAATTTCAGGATATAGGCAGTAGTTT
CTTCTTTAATAAAGGTCTTGCTGAATGTGTAACAATGAATAGCTGATGCAAATTAAGTTCAGAA
AACCCTAAACCCCAATAATCACTAATAAGTGCTGGGCAGGAAAGGAACTTAAGAAAACCATTTT
TTTTGGACAACCTTATTCTTTTCATATAAATTCAAAATCCAAAAACCCTACCTTACATATTAAT
TATATTAATCTGATCAAATTTTCAGGTTTATGAGTAAAGGTGGTATAAGTAGGTGATTAACTGA
TGGTAAAAACTTGATAAACAGGTAGCACAATGAAACCCCTAATTGTCTTAACTTTGCAGTACGT
AGTAGAATATTCAGTAACTGACAATAGCCCATATACAATATATTACATCAAATTTCTCCCTTTA
GAAACTTGTCTGAGTATTAGGATGCTAATTGAAAACTATCAGAGTGATACTACTCTAGAGGATT
AGCCGCACTGAATATGATGCATGTGAAATCCAGTTGTTAACTCTACCCTACAGACTGTTCTTAC
CTTTGAAAAGATATATATTTGATACGATATTAAGCATTACTTCCTTTTAACTCTAAAGCTAATG
CCAATGGTAACATACCTTAATGTTTTTTTTTTTTAACTTTTTCCTAAATTAGGGTGACTGTGGC
ATGAAGGGAAGCTTTGCAACTCGAGTAGCTGGGTCTTCCGATCTTTACAAAGTAAGTTTTGGTG
TTTCTTTCAAGTTAGTCTTGGTGAGAGTAGCTCTAGAGAGAGAGAGAAAGAGAGAAAAATCTTG
GTGAGAATAGATTAAGTACATAGTTTTGGTTACCGACAAATTGGGAAGCTTCTTGTTCCACTAT
TGTATTTTGTGATATATGATTACGGTGTGGAATGTTGGCTATGTTACTTGGCCCTTGGTTGTAT
CCCTGCAATAAAATGTTGGTTCTAATTGTGTAGATCATTCTGTATCTTCATAATTATTTAATAC
TTAACTTCTGTCTTATTTTATCAATAAGCTTACCATGGTATTATTTTTGTTATTCGAAATATCT
TGTTTAGGCTTTTCACTTTGTCTACAGGTGAATAAGCGTAAGCCTTGCCATGGTATTAATTTTG
TTATTGCTCATGATGGATTTACACTTCGTGATCTAGTTTCTTACAATGTCAAGGTATGTATAGT
TGTCACGTCCCGATTTTCTTTTGCATTGATCTTCAAATCTATCATTTGACTTTATCTTCTCGTT
TGTGTAGCATAATGATGCCAATGGTGAAGGTGGAAATGATGGATGCAACGATAACTTCAGCTGG
AATTGTGGTTTTGAAGGTATGTCCAAGCGATCAATGTAATATTGCTTTGAATCGTGTTTCCTCT
TCTATAAACACTTAGATTTGAACATTAGTAGAGTTTCTTAGGGAAATTCCCCTGTCGTTGGTGA
GTATCACGACAATCACAAGGTTCAAGCTAGTATGTTTCTTGGAATACATGCTGGGAAATATAAA
CGATACTGCCAAAAAATTTAGTGGAAAGTGGTAATAAAGAGTGTTAGTTTTCTTCTCGTCTCCT
GGTTAACTAAGATGAAAGGCCTTTTCTGGATCCACTTCCCTCGTAGGTTTACAGATCCTCATCC
TGTTTTGTCTTCTTTTGGCCAGGGGAATGTCCCTTTTTTACTCATTGAACGAAAAAATGGGTGC
AAGTTATGGGGGATCAGGGCTTTGCGGAATTTGACACAAGTTTCGTGGGAGAGTCCTGTCCCCT
CATCAAATTGCTTGAAAATTGTATTTTTCCTTTTTATTTGCCTGATATTTTATTACTTTGATTT
CTGTTTCCTGTCGCGGATCATAGCAGACAATTTTTCATTCAGAGTGGGCTAATAGACTGAAAGC
CATAATCAGTTTAAAGTCCAAGTATGAGCGAAATCAATCTGAAAACAAGAACTTTAAACAATCA
ATTACTCAGAGCAAAGTTTGGAGCTACAACCTTGCTCGAACAGGCTGTGTTCTAAAGTAAAGTT
TTAGCTAAAATGTGCACAGGAAATAGGAAGGTCGATGGGAAAGCTTGATTCATGAAGAATTAGA
AGATTTCCTGTATATTAGGAACTTCCAAAGATTTGGACCATGTCCAGTGTTAATGTTCCCCAAT
AAATTTGGACCATGTCCAGTGTTGACTTTCCCCAATAAACATTTTATTGAACAAGTGAGATTTG
ATGGTAGTGACCAATGAAAGTCACAAGCACAATTCCATCCATCAAGAAGCTTCCAGATTTAAAT
GAAAGAAGTTTGCCTTTGTCTTGATGGCATAATATGGAAGAAATTGAAAATTGGTTAAAGAATG
TTGAAATTTCGATGAAATATAGGGAGGCGTCAAAAGCAAAAATAGTCCACTTGGTTGTCTTCCA
GCTCAGGGAGGAACTTCTGCATGTTGGAAAGCTTTACATTAAGGTAGGAAACAACTTGAAGCCG
TTAAAATACCCTTTTGCATTCTTCTTTCTTGCACTCAATATTTGCCTCTTGCTTGAAATTTGAA
ATGCCTCCGTGCTTTCATACTTCTTGCACTCAGTCTTCGCATCATGCTTGGACTTTGAACAGCG
ATCAACCCCTGCTATTTTCTTGCATGTTCACACTATTTTGAGACTGTTGACATGCAAATATTTT
CTATCATGGCTCACTCTACAAGCAGCCAACAATCTGTTGTATGCTCCACCTCGTGTGAGCATCA
CTGCTATGATTAACTTCCGTGGAGAATATCCAAATTGCTTCAAGAAAATACACTTGGTGATTTG
AAAACAAGGTGTTAGAAACAACCTTTATGAATTTGAGAATGATGTGTGTTTCGAGAATGGTCTT
GTTAGTAGGGGCATAATAGTCTGTGGGTTTTTGTTTAGACGAATCACAAATGGTAGTTATGAAT
TTGAGTCGGGAAAGTTAATGCCAAGCAAATATTTGGGCAACCATTGTGTTTCAAGGGAGAGAGA
ACCTTCCGGCAGGCTATCAACCTTTGTGTTTTTTCTCAATATTATTAGTTTATGAAAAGAACCA
ATCTATATATTCTTGATTTGCCACCTTCATTTCTGGGGGCTATCAAATCCTAAAATTACCACCA
AACAATGTGGTATGCAAACTGGAAGTGGAACCACCTTTCAACAAGATTACTTTTTTAGACAAAA
ATCATTTTTTTAAGTTTAGCTACGTCCACCCTTATGTACTTTGCCACATGGGAAAAAAAACCTT
TCGAGACAGAATCATACACGTTTCAAACTCAGCTTCATCATTTACTAATAATAAGGTATCATTA
GGTTCAATACATATACATGTTTCTCAATGCCTATTTATGACAGGTGAAACGGAAGATACAAGCA
TTAAAGCTTTGCGCACAAGGCAAATGAAAAACTTCCATTTGGCTTTAATGACATCTCAGGTATA
AACATTTCCAAAATCCTTCAGCCATAGATGCATCATATAGTGAGCGCCGAAGTTCTTTCATAGT
TCTGGATGTTTTTACAAAGTTAGATTGAGTAGAGAGTACTCGTTTACACACCTGGAAAAAATCA
TTTTTGAGTTGTTTCTGTTTATCATAGTGAAGCTTTTAGCATCTCCGGTGGCATGTACTTATTC
TTATAATATCTCTAACGTGGTGTTGGAATTCTGTTAGTTCTATCTTCCCTCTTATTTAAATAAT
GGGGACTAATATTGGTTTCTCGTTGCTTATTTTCAGGGAACACCAATGATGTTAATGGGGGATG
AGTACGGGCATACTCGTTATGGAAATAACAATAGCTATGGACATGATAATGCTCTTAACCATTT
CCTTTGGGAACAGGTGTTTGTTATGTTACTAACCTTTCATAGCCCTTGTATATAGTCGAAGTTC
ATATAATAACTATTTACTCTTTCCTTTATTCTCAATAAAAGTTGTTCCTTATAAAAAGAATATA
TAACAACCATTTATGTTTCTGGTCTGTAGTTAGAGGCACGGAAGAGGGATCACTTCAGATTTTT
CTCTGAAGTGATAAAGTTTCGAAGGAAGCATCCCCATTTATTTAGCCGGGAAAATTTTCTAAAC
AAGGTGATTTTTCTTCACGTTTTTTTAAACCGTTCAAAATATGCTCCTCCTGGGATTAACCGAG
GATTCATTTCAGAATGATATAACTTGGCACGAAAGCAATTGGGACAATCCTGAAAGTAAATTTC
TTGCCTACAC
						
					

			
		

Sequences
Splice junction sequence	ATATGCTCCTCCTGGGATTAACCGAGGATTCATTTCAGAATGATATAACTTGGCACGAAAGCAA TTGGGACAATCCTGAAAGTAAATTTCTTGCCTACACgtgggctgaatggaacggaatataccgt gacgacatcagaaaatttattaaggtaatgttgagtgggacaaattttatttctttattttctc tttttttg
Assembled circRNA sequence	NA The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	NA
Genomic sequence	GTGGGCTGAATGGAACGGAATATACCGTGACGACATCAGAAAATTTATTAAGGTAATGTTGAGT GGGACAAATTTTATTTCTTTATTTTCTCTTTTTTTGTATGAGTCAATGTTGGATCAAATAAGTT ACTAGGAGGTGCAACCTAGTTGAGATGCCTAAGTGCACCTACTGATCCTAGTTATGCTTTATGC TCTTTGTGTAACTCTCGTGTACTTAGAGCATTAGTCTCTTTCATCTTATATCTATATGAATAAA GAGACTTGTTTCCTTCTTTAAAAAAAAAGTTCACGGAGAGGAATTTATTTTCATAATTATATAA TATTTTTAATTTGAGGCTCTTAATACTTATATAATTTTGAATTTCAGGATATAGGCAGTAGTTT CTTCTTTAATAAAGGTCTTGCTGAATGTGTAACAATGAATAGCTGATGCAAATTAAGTTCAGAA AACCCTAAACCCCAATAATCACTAATAAGTGCTGGGCAGGAAAGGAACTTAAGAAAACCATTTT TTTTGGACAACCTTATTCTTTTCATATAAATTCAAAATCCAAAAACCCTACCTTACATATTAAT TATATTAATCTGATCAAATTTTCAGGTTTATGAGTAAAGGTGGTATAAGTAGGTGATTAACTGA TGGTAAAAACTTGATAAACAGGTAGCACAATGAAACCCCTAATTGTCTTAACTTTGCAGTACGT AGTAGAATATTCAGTAACTGACAATAGCCCATATACAATATATTACATCAAATTTCTCCCTTTA GAAACTTGTCTGAGTATTAGGATGCTAATTGAAAACTATCAGAGTGATACTACTCTAGAGGATT AGCCGCACTGAATATGATGCATGTGAAATCCAGTTGTTAACTCTACCCTACAGACTGTTCTTAC CTTTGAAAAGATATATATTTGATACGATATTAAGCATTACTTCCTTTTAACTCTAAAGCTAATG CCAATGGTAACATACCTTAATGTTTTTTTTTTTTAACTTTTTCCTAAATTAGGGTGACTGTGGC ATGAAGGGAAGCTTTGCAACTCGAGTAGCTGGGTCTTCCGATCTTTACAAAGTAAGTTTTGGTG TTTCTTTCAAGTTAGTCTTGGTGAGAGTAGCTCTAGAGAGAGAGAGAAAGAGAGAAAAATCTTG GTGAGAATAGATTAAGTACATAGTTTTGGTTACCGACAAATTGGGAAGCTTCTTGTTCCACTAT TGTATTTTGTGATATATGATTACGGTGTGGAATGTTGGCTATGTTACTTGGCCCTTGGTTGTAT CCCTGCAATAAAATGTTGGTTCTAATTGTGTAGATCATTCTGTATCTTCATAATTATTTAATAC TTAACTTCTGTCTTATTTTATCAATAAGCTTACCATGGTATTATTTTTGTTATTCGAAATATCT TGTTTAGGCTTTTCACTTTGTCTACAGGTGAATAAGCGTAAGCCTTGCCATGGTATTAATTTTG TTATTGCTCATGATGGATTTACACTTCGTGATCTAGTTTCTTACAATGTCAAGGTATGTATAGT TGTCACGTCCCGATTTTCTTTTGCATTGATCTTCAAATCTATCATTTGACTTTATCTTCTCGTT TGTGTAGCATAATGATGCCAATGGTGAAGGTGGAAATGATGGATGCAACGATAACTTCAGCTGG AATTGTGGTTTTGAAGGTATGTCCAAGCGATCAATGTAATATTGCTTTGAATCGTGTTTCCTCT TCTATAAACACTTAGATTTGAACATTAGTAGAGTTTCTTAGGGAAATTCCCCTGTCGTTGGTGA GTATCACGACAATCACAAGGTTCAAGCTAGTATGTTTCTTGGAATACATGCTGGGAAATATAAA CGATACTGCCAAAAAATTTAGTGGAAAGTGGTAATAAAGAGTGTTAGTTTTCTTCTCGTCTCCT GGTTAACTAAGATGAAAGGCCTTTTCTGGATCCACTTCCCTCGTAGGTTTACAGATCCTCATCC TGTTTTGTCTTCTTTTGGCCAGGGGAATGTCCCTTTTTTACTCATTGAACGAAAAAATGGGTGC AAGTTATGGGGGATCAGGGCTTTGCGGAATTTGACACAAGTTTCGTGGGAGAGTCCTGTCCCCT CATCAAATTGCTTGAAAATTGTATTTTTCCTTTTTATTTGCCTGATATTTTATTACTTTGATTT CTGTTTCCTGTCGCGGATCATAGCAGACAATTTTTCATTCAGAGTGGGCTAATAGACTGAAAGC CATAATCAGTTTAAAGTCCAAGTATGAGCGAAATCAATCTGAAAACAAGAACTTTAAACAATCA ATTACTCAGAGCAAAGTTTGGAGCTACAACCTTGCTCGAACAGGCTGTGTTCTAAAGTAAAGTT TTAGCTAAAATGTGCACAGGAAATAGGAAGGTCGATGGGAAAGCTTGATTCATGAAGAATTAGA AGATTTCCTGTATATTAGGAACTTCCAAAGATTTGGACCATGTCCAGTGTTAATGTTCCCCAAT AAATTTGGACCATGTCCAGTGTTGACTTTCCCCAATAAACATTTTATTGAACAAGTGAGATTTG ATGGTAGTGACCAATGAAAGTCACAAGCACAATTCCATCCATCAAGAAGCTTCCAGATTTAAAT GAAAGAAGTTTGCCTTTGTCTTGATGGCATAATATGGAAGAAATTGAAAATTGGTTAAAGAATG TTGAAATTTCGATGAAATATAGGGAGGCGTCAAAAGCAAAAATAGTCCACTTGGTTGTCTTCCA GCTCAGGGAGGAACTTCTGCATGTTGGAAAGCTTTACATTAAGGTAGGAAACAACTTGAAGCCG TTAAAATACCCTTTTGCATTCTTCTTTCTTGCACTCAATATTTGCCTCTTGCTTGAAATTTGAA ATGCCTCCGTGCTTTCATACTTCTTGCACTCAGTCTTCGCATCATGCTTGGACTTTGAACAGCG ATCAACCCCTGCTATTTTCTTGCATGTTCACACTATTTTGAGACTGTTGACATGCAAATATTTT CTATCATGGCTCACTCTACAAGCAGCCAACAATCTGTTGTATGCTCCACCTCGTGTGAGCATCA CTGCTATGATTAACTTCCGTGGAGAATATCCAAATTGCTTCAAGAAAATACACTTGGTGATTTG AAAACAAGGTGTTAGAAACAACCTTTATGAATTTGAGAATGATGTGTGTTTCGAGAATGGTCTT GTTAGTAGGGGCATAATAGTCTGTGGGTTTTTGTTTAGACGAATCACAAATGGTAGTTATGAAT TTGAGTCGGGAAAGTTAATGCCAAGCAAATATTTGGGCAACCATTGTGTTTCAAGGGAGAGAGA ACCTTCCGGCAGGCTATCAACCTTTGTGTTTTTTCTCAATATTATTAGTTTATGAAAAGAACCA ATCTATATATTCTTGATTTGCCACCTTCATTTCTGGGGGCTATCAAATCCTAAAATTACCACCA AACAATGTGGTATGCAAACTGGAAGTGGAACCACCTTTCAACAAGATTACTTTTTTAGACAAAA ATCATTTTTTTAAGTTTAGCTACGTCCACCCTTATGTACTTTGCCACATGGGAAAAAAAACCTT TCGAGACAGAATCATACACGTTTCAAACTCAGCTTCATCATTTACTAATAATAAGGTATCATTA GGTTCAATACATATACATGTTTCTCAATGCCTATTTATGACAGGTGAAACGGAAGATACAAGCA TTAAAGCTTTGCGCACAAGGCAAATGAAAAACTTCCATTTGGCTTTAATGACATCTCAGGTATA AACATTTCCAAAATCCTTCAGCCATAGATGCATCATATAGTGAGCGCCGAAGTTCTTTCATAGT TCTGGATGTTTTTACAAAGTTAGATTGAGTAGAGAGTACTCGTTTACACACCTGGAAAAAATCA TTTTTGAGTTGTTTCTGTTTATCATAGTGAAGCTTTTAGCATCTCCGGTGGCATGTACTTATTC TTATAATATCTCTAACGTGGTGTTGGAATTCTGTTAGTTCTATCTTCCCTCTTATTTAAATAAT GGGGACTAATATTGGTTTCTCGTTGCTTATTTTCAGGGAACACCAATGATGTTAATGGGGGATG AGTACGGGCATACTCGTTATGGAAATAACAATAGCTATGGACATGATAATGCTCTTAACCATTT CCTTTGGGAACAGGTGTTTGTTATGTTACTAACCTTTCATAGCCCTTGTATATAGTCGAAGTTC ATATAATAACTATTTACTCTTTCCTTTATTCTCAATAAAAGTTGTTCCTTATAAAAAGAATATA TAACAACCATTTATGTTTCTGGTCTGTAGTTAGAGGCACGGAAGAGGGATCACTTCAGATTTTT CTCTGAAGTGATAAAGTTTCGAAGGAAGCATCCCCATTTATTTAGCCGGGAAAATTTTCTAAAC AAGGTGATTTTTCTTCACGTTTTTTTAAACCGTTCAAAATATGCTCCTCCTGGGATTAACCGAG GATTCATTTCAGAATGATATAACTTGGCACGAAAGCAATTGGGACAATCCTGAAAGTAAATTTC TTGCCTACAC

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.093112789

Conservation Information
Conserved circRNAs	NA
PMCS	0.093112789

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							37874614-37878139(+)
						
						Potential amino acid sequence
						
							MKGSFATRVAGSSDLYKVNKRKPCHGINFVIAHDGFTLRDLVSYNVKHNDANGEGGNDGCNDNF
SWNCGFEGETEDTSIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNH
FLWEQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTWAEW
NGIYRDDIRKFIKGDCGMKGSFATRVAGSSDLYKVNKRKPCHGINFVIAHDGFTLRDLVSYNVK
HNDANGEGGNDGCNDNFSWNCGFEGETEDTSIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGH
TRYGNNNSYGHDNALNHFLWEQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHES
NWDNPESKFLAYTWAEWNGIYRDDIRKFIKGDCGMKGSFATRVAGSSDLYKVNKRKPCHGINFV
IAHDGFTLRDLVSYNVKHNDANGEGGNDGCNDNFSWNCGFEGETEDTSIKALRTRQMKNFHLAL
MTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLWEQLEARKRDHFRFFSEVIKFRRKHPHL
FSRENFLNKNDITWHESNWDNPESKFLAYTWAEWNGIYRDDIRKFIKGDCGMKGSFATRVAGSS
DLYKVNKRKPCHGINFVIAHDGFTLRDLVSYNVKHNDANGEGGNDGCNDNFSWNCGFEGETEDT
SIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLWEQLEARKRDH
FRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAY
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						NA

Functional Information
Coding potential	Y
Potential coding position	37874614-37878139(+)
Potential amino acid sequence	MKGSFATRVAGSSDLYKVNKRKPCHGINFVIAHDGFTLRDLVSYNVKHNDANGEGGNDGCNDNF SWNCGFEGETEDTSIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNH FLWEQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAYTWAEW NGIYRDDIRKFIKGDCGMKGSFATRVAGSSDLYKVNKRKPCHGINFVIAHDGFTLRDLVSYNVK HNDANGEGGNDGCNDNFSWNCGFEGETEDTSIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGH TRYGNNNSYGHDNALNHFLWEQLEARKRDHFRFFSEVIKFRRKHPHLFSRENFLNKNDITWHES NWDNPESKFLAYTWAEWNGIYRDDIRKFIKGDCGMKGSFATRVAGSSDLYKVNKRKPCHGINFV IAHDGFTLRDLVSYNVKHNDANGEGGNDGCNDNFSWNCGFEGETEDTSIKALRTRQMKNFHLAL MTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLWEQLEARKRDHFRFFSEVIKFRRKHPHL FSRENFLNKNDITWHESNWDNPESKFLAYTWAEWNGIYRDDIRKFIKGDCGMKGSFATRVAGSS DLYKVNKRKPCHGINFVIAHDGFTLRDLVSYNVKHNDANGEGGNDGCNDNFSWNCGFEGETEDT SIKALRTRQMKNFHLALMTSQGTPMMLMGDEYGHTRYGNNNSYGHDNALNHFLWEQLEARKRDH FRFFSEVIKFRRKHPHLFSRENFLNKNDITWHESNWDNPESKFLAY
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	NA

			
						 Other Information
					
						References
						Zhu et al., 2019

circRNA

Detail information of Csa3G889910_circ_g.2

Address

Any questions?

Supported by