Detailed infomation of each circRNA
General Information | |
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CircRNA Name | AT1G21400_circ_g.2 |
ID in PlantcircBase | ath_circ_003765 |
Alias | Ath_circ_FC5012 |
Organism | Arabidpsis thaliana |
Position | chr1: 7494922-7495080 JBrowse» |
Reference genome | TAIR10.38 |
Type | ei-circRNA |
Identification method | find_circ |
Parent gene | AT1G21400 |
Parent gene annotation |
Thiamin diphosphate-binding fold (THDP-binding) superfamily prot ein |
Parent gene strand | + |
Alternative splicing | AT1G21400_circ_g.3 |
Support reads | 6 |
Tissues | whole_plant |
Exon boundary | No-Yes |
Splicing signals | GT-CA |
Number of exons covered | AT1G21400.4:1 AT1G21400.2:1 AT1G21400.5:1 AT1G21400.1:1 AT1G21400.3:1 AT1G21400.6:1 |
Conservation Information | |
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Conserved circRNAs | NA |
PMCS | 0.163518399 |
Functional Information | |
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Coding potential | N |
Potential coding position |
NA |
Potential amino acid sequence |
NA |
Sponge-miRNAs | NA |
circRNA-miRNA-mRNA network | VISUALIZATION |
Potential function description | NA |
Other Information | |
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References | Chen et al., 2017a |