Plant Circular RNA Database

Detail information of Zm00001d005356_circ_g.2

			
						 General Information
					
						CircRNA Name
						Zm00001d005356_circ_g.2
					
						ID in PlantcircBase
						zma_circ_007307
					
						Alias
						zma_circ_0000837, GRMZM2G331533_C1
					
						Organism
						
							Zea mays						
					
						Position
						
							chr2: 170861946-170865275  JBrowse»						
					
						Reference genome
						
							AGPv4.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						find_circ, CIRI2
					
						Parent gene
						
							Zm00001d005356						
					
						Parent gene annotation
						
							Nuclear pore complex protein GP210
							
						Parent gene strand
						+
					
						Alternative splicing
						
							Zm00001d005356_circ_g.1 						
					
						Support reads
						NA
					
						Tissues
						leaf, root
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							GT-AG							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Zm00001d005356_T001:7

General Information
CircRNA Name	Zm00001d005356_circ_g.2
ID in PlantcircBase	zma_circ_007307
Alias	zma_circ_0000837, GRMZM2G331533_C1
Organism	Zea mays
Position	chr2: 170861946-170865275 JBrowse»
Reference genome	AGPv4.38
Type	e-circRNA
Identification method	find_circ, CIRI2
Parent gene	Zm00001d005356
Parent gene annotation	Nuclear pore complex protein GP210
Parent gene strand	+
Alternative splicing	Zm00001d005356_circ_g.1
Support reads	NA
Tissues	leaf, root
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	GT-AG The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Zm00001d005356_T001:7

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							NA							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							NA							PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	NA Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	NA PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							ATGTGAAGGGCTTGCTTACTTTGAAGAAACCAAATCTGTTGAAATGCTTGATGAGTCAGCTTGG
GAGAGATCTCTTGTCCTACAGAATTCTACAGGAGTGgaaaatgagcttaaactggagagtagta
ccatggaattctggaacttatcgcaggtgccagacagttctacaagttcctatgaagtgcaaac
ttctagat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 1584
Transcript exons: 170861946-170862125,170862236-170862374,170862470-170862
618,170863431-170863542,170864042-170864640,170864752-17
0864875,170864995-170865275
GAAAATGAGCTTAAACTGGAGAGTAGTACCATGGAATTCTGGAACTTATCGCAGGTGCCAGACA
GTTCTACAAGTTCCTATGAAGTGCAAACTTCTAGATTGTTAAGTCCTATTTTCCAGGGGCAAGG
GCATTTAGATGCTTCCTTAACTTACCTAACGGGGGCATCTGGACCAACAAAGGTGCTCAAGCTT
GTGCAAGAAGTTAATGTTTGTAGTAAGGTGAAGGCATTCTGGGATGAAGGATTGGAGAACTCCA
ACGTTATTTACCTGCCCTGGGTTCCTGGAGTTCACCAGGAAGTTGAAATGATGGCAATTGGAGG
GTGTGGTAAGACGCTGGATGACTACAAGTTATTTTCCTCTGATGAGGATGTTGCTTCTGTGTCT
GATTCCCGTATCGTGCGTGCAAAAAAGCCTGGTCAAGCTGTCATCCGAGTAGTTTCTGCTTTCG
ATTTCTTGAATTTTGATGAGGTAATTGTTGAAGTTTCCATTCCTTCAGTACTGTCTATCTTGCC
AATCTTTCCTGTGGAGGTGCCTGTTGGAACACGACTTCATTCTGCTGCAGTGTTAAAAACATCT
GCTGGACACCCATTCTCACAATGTACCCATTTTAATGCTTTTATAAGGTGGAGTCTACTATCCG
AGGATGAGGCCTTTCACATTCTTAACACCGCTGAGGCCTCAAGCATCGACGACATAAAACATAA
TTCTGGTTATTGGGGACAAAATGGCAATCCTTGTGCCTGGGTCTCTCTGAGTGCATTTGCTGCT
GGCAGATCAACAATAGTTGCAACATTTGCTGTTGATTCAGATTCAGATATTGAGACATTTGGTG
GACCCATTTCTCTGGAGGCAACTTCAAAAATTTCTGCATATTATCCTCTTGTAGTTCTCCAAGG
GGGGAATGGAAATCATTTTGGTGGGTACTGGTTTGACTTATCTGGAATTCATAGTAGGATTAAG
AACATGGATAACAACTCTCCCAAGGAGCTGTACTTAGTTCCTGGATCAACAATGGATGTCCTTA
TCTTCGGAGGACCTGAGCGTTGGGACCAAGTTATTGATTTTGTTGAAACAGTTGATGTTATTGA
TCCATCCAAAAATCATATTATTAGTTCTACCGCTGTGAAGAAACTATCTAGTGGACTATATCGA
GTATCTTGCCTAAGCAAAGTGAGCTATAAATTGCTGTTTTCACGTGGGAACATGGTTGGTAAAG
ATCATCCTGTGCCTGCAATTTCCAAATCAGAGTTCACTGTTATTTGTGACTTCCCATCAGAAAT
AACATTGATAGCAAATGAAAATGAAAACCGACTTGATATATTGGAAGCTGCTAGGAAAGCTGAC
CGTGGTCCAGATAGATTGCAAGCATCACCCATTGTAATCTCCAACGGAAGAAATATACGTCTAG
CTGCTGCGAGTATACATGTAAATGGAAGATTTTTCGCTAATTCATCTTCTCTTCGCTTGAAATG
GGAAGCCACTGGATGTGAAGGGCTTGCTTACTTTGAAGAAACCAAATCTGTTGAAATGCTTGAT
GAGTCAGCTTGGGAGAGATCTCTTGTCCTACAGAATTCTACAGGAGTG
						
					

						Genomic sequence
						
							GAAAATGAGCTTAAACTGGAGAGTAGTACCATGGAATTCTGGAACTTATCGCAGGTGCCAGACA
GTTCTACAAGTTCCTATGAAGTGCAAACTTCTAGATTGTTAAGTCCTATTTTCCAGGGGCAAGG
GCATTTAGATGCTTCCTTAACTTACCTAACGGGGGCATCTGGACCAACAAAGGTACATCCAACT
CATGTGTGCATTTTTTTGGTGCATTGTTTAGCAGAGACTATTAGGATGACATTGTCATTACGGT
TTGCTGATCACCTGATTGATGCATGCAATATTAGGTGCTCAAGCTTGTGCAAGAAGTTAATGTT
TGTAGTAAGGTGAAGGCATTCTGGGATGAAGGATTGGAGAACTCCAACGTTATTTACCTGCCCT
GGGTTCCTGGAGTTCACCAGGAAGTTGAAATGATGGCAATTGGAGGTTGGTTATTGTAGTATAC
TGATATCTGCATATTTTTTTCCCACTTTTAGTTTGTAATTTGAGTAGTTTTATATTGTCTTTGC
ATTCATATGAAGGGTGTGGTAAGACGCTGGATGACTACAAGTTATTTTCCTCTGATGAGGATGT
TGCTTCTGTGTCTGATTCCCGTATCGTGCGTGCAAAAAAGCCTGGTCAAGCTGTCATCCGAGTA
GTTTCTGCTTTCGATTTCTTGAATTTTGATGAGGTTTGTCTATCTAATTTTCTTTTTAAATACT
TATCCTTCCTGAGGTCTTTACCTAGTTGACATGATATGAAGAGTGACACATGTTATTCCTAGAG
ATCATCTATAGAACCACTTATTATGTTGTGCTGAGTTACTGGTGATGTGTAAGGTTTAAATTTA
AACTTCAAAATTTCTACTATTTAGTGCTGATCACTATAACAATAACTTCTTACAGAATGACCAG
TTGACCACTTCCTTTTATTTTTTCTCTTGCCCTTGGACTTCTGAACCTTATGCATATCTAGCAT
ATGTGCACCTTTTTCTGTTACAATTGTTTGTTTGAGGCCTTTATTCTTGGGCAAAGCATATTAT
GACACCTTCCTTTAATTATCAGATAGATACATTGAAGTTACTGGATCCATGTTTTCCACAAGTG
TATATCTGCACCAACTCCCGAAAAGAAAAAAAACCCATACTTGCATAGTCTACTGTGCCTTCAT
TCACATTTTCAGTTCACTGAACGTGCATACATGGTTGATTGATTACTGTCCTTTTTGTAGTTTC
ATTCTGGGTTCATTTTATTTCATGGTTCATGACAGTCCTGTTTCATTATTCTACTTTTTTGAGC
CATTGGCAATTTTGCCATTACCATTTGTGGGCTTTGCCAGTATGCCATCGGACCCACAAATCAT
ACACAAATGGCATAATAACGGACAACCAAAATTGAGAGTGGCGAAATGGCTTTTAGTGGAAGTC
TTCCTTTACATTAATAATATTCCGTTTCCACAAATTTCAGACTCCTGGTAGCTCATTTTGTTTT
TTTGGCAATGTAGGTAATTGTTGAAGTTTCCATTCCTTCAGTACTGTCTATCTTGCCAATCTTT
CCTGTGGAGGTGCCTGTTGGAACACGACTTCATTCTGCTGCAGTGTTAAAAACATCTGCTGGTG
CGTTTGCCAAAAAAGAAACATATGGTGGTTCATGCAAGTTGAATTTGATGTCACTCCTTTGTTA
CAAATCAGATGAAGTTTAGCTTGTGCCTTACAAAATGGCATTAGTACACGAATGGAAAGTAGCT
TGTGTCTTACAAAATGACATTAGTACAAGAATGCTAGGTTTTGGAGTACTACTCTCATACCAAT
GCTTCTGCTGTCAACTCTCTCTTGTTCTGTCCTCATCCTCAGCAAATAGCATAATTTATTCAGG
GATTCAAATCAGACTTCGTCTTTTTCTTACAAGAAGAAAGAAGCTTATGTTAAACTTATCCATT
TTTGTGTAGCATCTGAATTACTAATTAATTATTTTTGCCTTCAAACTGTTATGTTCTAAATGAG
CTTTCACCATTTCTCTCTGCAGGACACCCATTCTCACAATGTAACCATTTTAATGCTTTTATGC
CTTCAAACTGTTATGTTCTAAATGAGCTATCACCGTTTCTCTCTGCAGGACACCCATTCTCACA
ATGTACCCATTTTAATGCTTTTATAAGGTGGAGTCTACTATCCGAGGATGAGGCCTTTCACATT
CTTAACACCGCTGAGGCCTCAAGCATCGACGACATAAAACATAATTCTGGTTATTGGGGACAAA
ATGGCAATCCTTGTGCCTGGGTCTCTCTGAGTGCATTTGCTGCTGGCAGATCAACAATAGTTGC
AACATTTGCTGTTGATTCAGATTCAGATATTGAGACATTTGGTGGACCCATTTCTCTGGAGGCA
ACTTCAAAAATTTCTGCATATTATCCTCTTGTAGTTCTCCAAGGGGGGAATGGAAATCATTTTG
GTGGGTACTGGTTTGACTTATCTGGAATTCATAGTAGGATTAAGAACATGGATAACAACTCTCC
CAAGGAGCTGTACTTAGTTCCTGGATCAACAATGGATGTCCTTATCTTCGGAGGACCTGAGCGT
TGGGACCAAGTTATTGATTTTGTTGAAACAGTTGATGTTATTGATCCATCCAAAAATCATATTA
TTAGTTCTACCGCTGTGAAGAAACTATCTAGTGGACTATATCGAGTATCTTGCCTAAGCAAAGT
GAGCTATGTAAGTACTTCAAATGGATCTTTGCATTTTTGTTTATGAACTGCGTATTGCAATATA
TTCTGGTGAATTGATTCACTGAAATATATTTAATTTAATTCACTTTTTTTTTAGAAATTGCTGT
TTTCACGTGGGAACATGGTTGGTAAAGATCATCCTGTGCCTGCAATTTCCAAATCAGAGTTCAC
TGTTATTTGTGACTTCCCATCAGAAATAACATTGATAGCAAATGAAAATGGTACTTTCTTGTTC
TTTTCATTAAAATTCAGTTTAATAATCCTTAAAAGTTCAACATGTCCATGTTGAAAGTTTTTGT
ACTGTTCCCAGCCTACTAAATGGTTTCCGTTGACTGTACAGAAAACCGACTTGATATATTGGAA
GCTGCTAGGAAAGCTGACCGTGGTCCAGATAGATTGCAAGCATCACCCATTGTAATCTCCAACG
GAAGAAATATACGTCTAGCTGCTGCGAGTATACATGTAAATGGAAGATTTTTCGCTAATTCATC
TTCTCTTCGCTTGAAATGGGAAGCCACTGGATGTGAAGGGCTTGCTTACTTTGAAGAAACCAAA
TCTGTTGAAATGCTTGATGAGTCAGCTTGGGAGAGATCTCTTGTCCTACAGAATTCTACAGGAG
TG
						
					

			
		

Sequences
Splice junction sequence	ATGTGAAGGGCTTGCTTACTTTGAAGAAACCAAATCTGTTGAAATGCTTGATGAGTCAGCTTGG GAGAGATCTCTTGTCCTACAGAATTCTACAGGAGTGgaaaatgagcttaaactggagagtagta ccatggaattctggaacttatcgcaggtgccagacagttctacaagttcctatgaagtgcaaac ttctagat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 1584 Transcript exons: 170861946-170862125,170862236-170862374,170862470-170862 618,170863431-170863542,170864042-170864640,170864752-17 0864875,170864995-170865275 GAAAATGAGCTTAAACTGGAGAGTAGTACCATGGAATTCTGGAACTTATCGCAGGTGCCAGACA GTTCTACAAGTTCCTATGAAGTGCAAACTTCTAGATTGTTAAGTCCTATTTTCCAGGGGCAAGG GCATTTAGATGCTTCCTTAACTTACCTAACGGGGGCATCTGGACCAACAAAGGTGCTCAAGCTT GTGCAAGAAGTTAATGTTTGTAGTAAGGTGAAGGCATTCTGGGATGAAGGATTGGAGAACTCCA ACGTTATTTACCTGCCCTGGGTTCCTGGAGTTCACCAGGAAGTTGAAATGATGGCAATTGGAGG GTGTGGTAAGACGCTGGATGACTACAAGTTATTTTCCTCTGATGAGGATGTTGCTTCTGTGTCT GATTCCCGTATCGTGCGTGCAAAAAAGCCTGGTCAAGCTGTCATCCGAGTAGTTTCTGCTTTCG ATTTCTTGAATTTTGATGAGGTAATTGTTGAAGTTTCCATTCCTTCAGTACTGTCTATCTTGCC AATCTTTCCTGTGGAGGTGCCTGTTGGAACACGACTTCATTCTGCTGCAGTGTTAAAAACATCT GCTGGACACCCATTCTCACAATGTACCCATTTTAATGCTTTTATAAGGTGGAGTCTACTATCCG AGGATGAGGCCTTTCACATTCTTAACACCGCTGAGGCCTCAAGCATCGACGACATAAAACATAA TTCTGGTTATTGGGGACAAAATGGCAATCCTTGTGCCTGGGTCTCTCTGAGTGCATTTGCTGCT GGCAGATCAACAATAGTTGCAACATTTGCTGTTGATTCAGATTCAGATATTGAGACATTTGGTG GACCCATTTCTCTGGAGGCAACTTCAAAAATTTCTGCATATTATCCTCTTGTAGTTCTCCAAGG GGGGAATGGAAATCATTTTGGTGGGTACTGGTTTGACTTATCTGGAATTCATAGTAGGATTAAG AACATGGATAACAACTCTCCCAAGGAGCTGTACTTAGTTCCTGGATCAACAATGGATGTCCTTA TCTTCGGAGGACCTGAGCGTTGGGACCAAGTTATTGATTTTGTTGAAACAGTTGATGTTATTGA TCCATCCAAAAATCATATTATTAGTTCTACCGCTGTGAAGAAACTATCTAGTGGACTATATCGA GTATCTTGCCTAAGCAAAGTGAGCTATAAATTGCTGTTTTCACGTGGGAACATGGTTGGTAAAG ATCATCCTGTGCCTGCAATTTCCAAATCAGAGTTCACTGTTATTTGTGACTTCCCATCAGAAAT AACATTGATAGCAAATGAAAATGAAAACCGACTTGATATATTGGAAGCTGCTAGGAAAGCTGAC CGTGGTCCAGATAGATTGCAAGCATCACCCATTGTAATCTCCAACGGAAGAAATATACGTCTAG CTGCTGCGAGTATACATGTAAATGGAAGATTTTTCGCTAATTCATCTTCTCTTCGCTTGAAATG GGAAGCCACTGGATGTGAAGGGCTTGCTTACTTTGAAGAAACCAAATCTGTTGAAATGCTTGAT GAGTCAGCTTGGGAGAGATCTCTTGTCCTACAGAATTCTACAGGAGTG
Genomic sequence	GAAAATGAGCTTAAACTGGAGAGTAGTACCATGGAATTCTGGAACTTATCGCAGGTGCCAGACA GTTCTACAAGTTCCTATGAAGTGCAAACTTCTAGATTGTTAAGTCCTATTTTCCAGGGGCAAGG GCATTTAGATGCTTCCTTAACTTACCTAACGGGGGCATCTGGACCAACAAAGGTACATCCAACT CATGTGTGCATTTTTTTGGTGCATTGTTTAGCAGAGACTATTAGGATGACATTGTCATTACGGT TTGCTGATCACCTGATTGATGCATGCAATATTAGGTGCTCAAGCTTGTGCAAGAAGTTAATGTT TGTAGTAAGGTGAAGGCATTCTGGGATGAAGGATTGGAGAACTCCAACGTTATTTACCTGCCCT GGGTTCCTGGAGTTCACCAGGAAGTTGAAATGATGGCAATTGGAGGTTGGTTATTGTAGTATAC TGATATCTGCATATTTTTTTCCCACTTTTAGTTTGTAATTTGAGTAGTTTTATATTGTCTTTGC ATTCATATGAAGGGTGTGGTAAGACGCTGGATGACTACAAGTTATTTTCCTCTGATGAGGATGT TGCTTCTGTGTCTGATTCCCGTATCGTGCGTGCAAAAAAGCCTGGTCAAGCTGTCATCCGAGTA GTTTCTGCTTTCGATTTCTTGAATTTTGATGAGGTTTGTCTATCTAATTTTCTTTTTAAATACT TATCCTTCCTGAGGTCTTTACCTAGTTGACATGATATGAAGAGTGACACATGTTATTCCTAGAG ATCATCTATAGAACCACTTATTATGTTGTGCTGAGTTACTGGTGATGTGTAAGGTTTAAATTTA AACTTCAAAATTTCTACTATTTAGTGCTGATCACTATAACAATAACTTCTTACAGAATGACCAG TTGACCACTTCCTTTTATTTTTTCTCTTGCCCTTGGACTTCTGAACCTTATGCATATCTAGCAT ATGTGCACCTTTTTCTGTTACAATTGTTTGTTTGAGGCCTTTATTCTTGGGCAAAGCATATTAT GACACCTTCCTTTAATTATCAGATAGATACATTGAAGTTACTGGATCCATGTTTTCCACAAGTG TATATCTGCACCAACTCCCGAAAAGAAAAAAAACCCATACTTGCATAGTCTACTGTGCCTTCAT TCACATTTTCAGTTCACTGAACGTGCATACATGGTTGATTGATTACTGTCCTTTTTGTAGTTTC ATTCTGGGTTCATTTTATTTCATGGTTCATGACAGTCCTGTTTCATTATTCTACTTTTTTGAGC CATTGGCAATTTTGCCATTACCATTTGTGGGCTTTGCCAGTATGCCATCGGACCCACAAATCAT ACACAAATGGCATAATAACGGACAACCAAAATTGAGAGTGGCGAAATGGCTTTTAGTGGAAGTC TTCCTTTACATTAATAATATTCCGTTTCCACAAATTTCAGACTCCTGGTAGCTCATTTTGTTTT TTTGGCAATGTAGGTAATTGTTGAAGTTTCCATTCCTTCAGTACTGTCTATCTTGCCAATCTTT CCTGTGGAGGTGCCTGTTGGAACACGACTTCATTCTGCTGCAGTGTTAAAAACATCTGCTGGTG CGTTTGCCAAAAAAGAAACATATGGTGGTTCATGCAAGTTGAATTTGATGTCACTCCTTTGTTA CAAATCAGATGAAGTTTAGCTTGTGCCTTACAAAATGGCATTAGTACACGAATGGAAAGTAGCT TGTGTCTTACAAAATGACATTAGTACAAGAATGCTAGGTTTTGGAGTACTACTCTCATACCAAT GCTTCTGCTGTCAACTCTCTCTTGTTCTGTCCTCATCCTCAGCAAATAGCATAATTTATTCAGG GATTCAAATCAGACTTCGTCTTTTTCTTACAAGAAGAAAGAAGCTTATGTTAAACTTATCCATT TTTGTGTAGCATCTGAATTACTAATTAATTATTTTTGCCTTCAAACTGTTATGTTCTAAATGAG CTTTCACCATTTCTCTCTGCAGGACACCCATTCTCACAATGTAACCATTTTAATGCTTTTATGC CTTCAAACTGTTATGTTCTAAATGAGCTATCACCGTTTCTCTCTGCAGGACACCCATTCTCACA ATGTACCCATTTTAATGCTTTTATAAGGTGGAGTCTACTATCCGAGGATGAGGCCTTTCACATT CTTAACACCGCTGAGGCCTCAAGCATCGACGACATAAAACATAATTCTGGTTATTGGGGACAAA ATGGCAATCCTTGTGCCTGGGTCTCTCTGAGTGCATTTGCTGCTGGCAGATCAACAATAGTTGC AACATTTGCTGTTGATTCAGATTCAGATATTGAGACATTTGGTGGACCCATTTCTCTGGAGGCA ACTTCAAAAATTTCTGCATATTATCCTCTTGTAGTTCTCCAAGGGGGGAATGGAAATCATTTTG GTGGGTACTGGTTTGACTTATCTGGAATTCATAGTAGGATTAAGAACATGGATAACAACTCTCC CAAGGAGCTGTACTTAGTTCCTGGATCAACAATGGATGTCCTTATCTTCGGAGGACCTGAGCGT TGGGACCAAGTTATTGATTTTGTTGAAACAGTTGATGTTATTGATCCATCCAAAAATCATATTA TTAGTTCTACCGCTGTGAAGAAACTATCTAGTGGACTATATCGAGTATCTTGCCTAAGCAAAGT GAGCTATGTAAGTACTTCAAATGGATCTTTGCATTTTTGTTTATGAACTGCGTATTGCAATATA TTCTGGTGAATTGATTCACTGAAATATATTTAATTTAATTCACTTTTTTTTTAGAAATTGCTGT TTTCACGTGGGAACATGGTTGGTAAAGATCATCCTGTGCCTGCAATTTCCAAATCAGAGTTCAC TGTTATTTGTGACTTCCCATCAGAAATAACATTGATAGCAAATGAAAATGGTACTTTCTTGTTC TTTTCATTAAAATTCAGTTTAATAATCCTTAAAAGTTCAACATGTCCATGTTGAAAGTTTTTGT ACTGTTCCCAGCCTACTAAATGGTTTCCGTTGACTGTACAGAAAACCGACTTGATATATTGGAA GCTGCTAGGAAAGCTGACCGTGGTCCAGATAGATTGCAAGCATCACCCATTGTAATCTCCAACG GAAGAAATATACGTCTAGCTGCTGCGAGTATACATGTAAATGGAAGATTTTTCGCTAATTCATC TTCTCTTCGCTTGAAATGGGAAGCCACTGGATGTGAAGGGCTTGCTTACTTTGAAGAAACCAAA TCTGTTGAAATGCTTGATGAGTCAGCTTGGGAGAGATCTCTTGTCCTACAGAATTCTACAGGAG TG

			
						 Conservation Information
					
						Conserved circRNAs
						
							NA						
					
						PMCS
						0.092249362

Conservation Information
Conserved circRNAs	NA
PMCS	0.092249362

			
				
						 Functional Information
					

				
						Coding potential
						Y
					

						Potential coding position
						
							170861977-170865272(+)
170865227-170862048(+)
170861979-170865193(-)
						
					

						Potential amino acid sequence
						
							MEFWNLSQVPDSSTSSYEVQTSRLLSPIFQGQGHLDASLTYLTGASGPTKVLKLVQEVNVCSKV
KAFWDEGLENSNVIYLPWVPGVHQEVEMMAIGGCGKTLDDYKLFSSDEDVASVSDSRIVRAKKP
GQAVIRVVSAFDFLNFDEVIVEVSIPSVLSILPIFPVEVPVGTRLHSAAVLKTSAGHPFSQCTH
FNAFIRWSLLSEDEAFHILNTAEASSIDDIKHNSGYWGQNGNPCAWVSLSAFAAGRSTIVATFA
VDSDSDIETFGGPISLEATSKISAYYPLVVLQGGNGNHFGGYWFDLSGIHSRIKNMDNNSPKEL
YLVPGSTMDVLIFGGPERWDQVIDFVETVDVIDPSKNHIISSTAVKKLSSGLYRVSCLSKVSYK
LLFSRGNMVGKDHPVPAISKSEFTVICDFPSEITLIANENENRLDILEAARKADRGPDRLQASP
IVISNGRNIRLAAASIHVNGRFFANSSSLRLKWEATGCEGLAYFEETKSVEMLDESAWERSLVL
QNSTGVENELKLESSTMEFWNLSQVPDSSTSSYEVQTSRLLSPIFQGQGHLDASLTYLTGASGP
TKVLKLVQEVNVCSKVKAFWDEGLENSNVIYLPWVPGVHQEVEMMAIGGCGKTLDDYKLFSSDE
DVASVSDSRIVRAKKPGQAVIRVVSAFDFLNFDEVIVEVSIPSVLSILPIFPVEVPVGTRLHSA
AVLKTSAGHPFSQCTHFNAFIRWSLLSEDEAFHILNTAEASSIDDIKHNSGYWGQNGNPCAWVS
LSAFAAGRSTIVATFAVDSDSDIETFGGPISLEATSKISAYYPLVVLQGGNGNHFGGYWFDLSG
IHSRIKNMDNNSPKELYLVPGSTMDVLIFGGPERWDQVIDFVETVDVIDPSKNHIISSTAVKKL
SSGLYRVSCLSKVSYKLLFSRGNMVGKDHPVPAISKSEFTVICDFPSEITLIANENENRLDILE
AARKADRGPDRLQASPIVISNGRNIRLAAASIHVNGRFFANSSSLRLKWEATGCEGLAYFEETK
SVEMLDESAWERSLVLQNSTGVENELKLESSTMEFWNLSQVPDSSTSSYEVQTSRLLSPIFQGQ
GHLDASLTYLTGASGPTKVLKLVQEVNVCSKVKAFWDEGLENSNVIYLPWVPGVHQEVEMMAIG
GCGKTLDDYKLFSSDEDVASVSDSRIVRAKKPGQAVIRVVSAFDFLNFDEVIVEVSIPSVLSIL
PIFPVEVPVGTRLHSAAVLKTSAGHPFSQCTHFNAFIRWSLLSEDEAFHILNTAEASSIDDIKH
NSGYWGQNGNPCAWVSLSAFAAGRSTIVATFAVDSDSDIETFGGPISLEATSKISAYYPLVVLQ
GGNGNHFGGYWFDLSGIHSRIKNMDNNSPKELYLVPGSTMDVLIFGGPERWDQVIDFVETVDVI
DPSKNHIISSTAVKKLSSGLYRVSCLSKVSYKLLFSRGNMVGKDHPVPAISKSEFTVICDFPSE
ITLIANENENRLDILEAARKADRGPDRLQASPIVISNGRNIRLAAASIHVNGRFFANSSSLRLK
WEATGCEGLAYFEETKSVEMLDESAWERSLVLQNSTGVENELKLESSTMEFWNLSQVPDSSTSS
YEVQTSRLLSPIFQGQGHLDASLTYLTGASGPTKVLKLVQEVNVCSKVKAFWDEGLENSNVIYL
PWVPGVHQEVEMMAIGGCGKTLDDYKLFSSDEDVASVSDSRIVRAKKPGQAVIRVVSAFDFLNF
DEVIVEVSIPSVLSILPIFPVEVPVGTRLHSAAVLKTSAGHPFSQCTHFNAFIRWSLLSEDEAF
HILNTAEASSIDDIKHNSGYWGQNGNPCAWVSLSAFAAGRSTIVATFAVDSDSDIETFGGPISL
EATSKISAYYPLVVLQGGNGNHFGGYWFDLSGIHSRIKNMDNNSPKELYLVPGSTMDVLIFGGP
ERWDQVIDFVETVDVIDPSKNHIISSTAVKKLSSGLYRVSCLSKVSYKLLFSRGNMVGKDHPVP
AISKSEFTVICDFPSEITLIANENENRLDILEAARKADRGPDRLQASPIVISNGRNIRLAAASI
HVNGRFFANSSSLRLKWEATGCEGLAYFEETKSVEMLDESAWERSLVLQNSTGV(+)
MSQLGRDLLSYRILQEWKMSLNWRVVPWNSGTYRRCQTVLQVPMKCKLLDC*(+)
MVLLSSLSSFSTPVEFCRTRDLSQADSSSISTDLVSSK*(-)
						
					

						Sponge-miRNAs
						
							NA						
					

						circRNA-miRNA-mRNA network
						 VISUALIZATION
					

						Potential function description
						responsive to drought stress
					

			
		

Functional Information
Coding potential	Y
Potential coding position	170861977-170865272(+) 170865227-170862048(+) 170861979-170865193(-)
Potential amino acid sequence	MEFWNLSQVPDSSTSSYEVQTSRLLSPIFQGQGHLDASLTYLTGASGPTKVLKLVQEVNVCSKV KAFWDEGLENSNVIYLPWVPGVHQEVEMMAIGGCGKTLDDYKLFSSDEDVASVSDSRIVRAKKP GQAVIRVVSAFDFLNFDEVIVEVSIPSVLSILPIFPVEVPVGTRLHSAAVLKTSAGHPFSQCTH FNAFIRWSLLSEDEAFHILNTAEASSIDDIKHNSGYWGQNGNPCAWVSLSAFAAGRSTIVATFA VDSDSDIETFGGPISLEATSKISAYYPLVVLQGGNGNHFGGYWFDLSGIHSRIKNMDNNSPKEL YLVPGSTMDVLIFGGPERWDQVIDFVETVDVIDPSKNHIISSTAVKKLSSGLYRVSCLSKVSYK LLFSRGNMVGKDHPVPAISKSEFTVICDFPSEITLIANENENRLDILEAARKADRGPDRLQASP IVISNGRNIRLAAASIHVNGRFFANSSSLRLKWEATGCEGLAYFEETKSVEMLDESAWERSLVL QNSTGVENELKLESSTMEFWNLSQVPDSSTSSYEVQTSRLLSPIFQGQGHLDASLTYLTGASGP TKVLKLVQEVNVCSKVKAFWDEGLENSNVIYLPWVPGVHQEVEMMAIGGCGKTLDDYKLFSSDE DVASVSDSRIVRAKKPGQAVIRVVSAFDFLNFDEVIVEVSIPSVLSILPIFPVEVPVGTRLHSA AVLKTSAGHPFSQCTHFNAFIRWSLLSEDEAFHILNTAEASSIDDIKHNSGYWGQNGNPCAWVS LSAFAAGRSTIVATFAVDSDSDIETFGGPISLEATSKISAYYPLVVLQGGNGNHFGGYWFDLSG IHSRIKNMDNNSPKELYLVPGSTMDVLIFGGPERWDQVIDFVETVDVIDPSKNHIISSTAVKKL SSGLYRVSCLSKVSYKLLFSRGNMVGKDHPVPAISKSEFTVICDFPSEITLIANENENRLDILE AARKADRGPDRLQASPIVISNGRNIRLAAASIHVNGRFFANSSSLRLKWEATGCEGLAYFEETK SVEMLDESAWERSLVLQNSTGVENELKLESSTMEFWNLSQVPDSSTSSYEVQTSRLLSPIFQGQ GHLDASLTYLTGASGPTKVLKLVQEVNVCSKVKAFWDEGLENSNVIYLPWVPGVHQEVEMMAIG GCGKTLDDYKLFSSDEDVASVSDSRIVRAKKPGQAVIRVVSAFDFLNFDEVIVEVSIPSVLSIL PIFPVEVPVGTRLHSAAVLKTSAGHPFSQCTHFNAFIRWSLLSEDEAFHILNTAEASSIDDIKH NSGYWGQNGNPCAWVSLSAFAAGRSTIVATFAVDSDSDIETFGGPISLEATSKISAYYPLVVLQ GGNGNHFGGYWFDLSGIHSRIKNMDNNSPKELYLVPGSTMDVLIFGGPERWDQVIDFVETVDVI DPSKNHIISSTAVKKLSSGLYRVSCLSKVSYKLLFSRGNMVGKDHPVPAISKSEFTVICDFPSE ITLIANENENRLDILEAARKADRGPDRLQASPIVISNGRNIRLAAASIHVNGRFFANSSSLRLK WEATGCEGLAYFEETKSVEMLDESAWERSLVLQNSTGVENELKLESSTMEFWNLSQVPDSSTSS YEVQTSRLLSPIFQGQGHLDASLTYLTGASGPTKVLKLVQEVNVCSKVKAFWDEGLENSNVIYL PWVPGVHQEVEMMAIGGCGKTLDDYKLFSSDEDVASVSDSRIVRAKKPGQAVIRVVSAFDFLNF DEVIVEVSIPSVLSILPIFPVEVPVGTRLHSAAVLKTSAGHPFSQCTHFNAFIRWSLLSEDEAF HILNTAEASSIDDIKHNSGYWGQNGNPCAWVSLSAFAAGRSTIVATFAVDSDSDIETFGGPISL EATSKISAYYPLVVLQGGNGNHFGGYWFDLSGIHSRIKNMDNNSPKELYLVPGSTMDVLIFGGP ERWDQVIDFVETVDVIDPSKNHIISSTAVKKLSSGLYRVSCLSKVSYKLLFSRGNMVGKDHPVP AISKSEFTVICDFPSEITLIANENENRLDILEAARKADRGPDRLQASPIVISNGRNIRLAAASI HVNGRFFANSSSLRLKWEATGCEGLAYFEETKSVEMLDESAWERSLVLQNSTGV(+) MSQLGRDLLSYRILQEWKMSLNWRVVPWNSGTYRRCQTVLQVPMKCKLLDC(+) MVLLSSLSSFSTPVEFCRTRDLSQADSSSISTDLVSSK(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to drought stress

			
						 Other Information
					
						References
						Ma et al., 2021b;Zhang et al., 2019

circRNA

Detail information of Zm00001d005356_circ_g.2

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