Plant Circular RNA Database

Detail information of Os04g0686650_circ_g.2

			
						 General Information
					
						CircRNA Name
						Os04g0686650_circ_g.2
					
						ID in PlantcircBase
						osa_circ_026059
					
						Alias
						Os04circ18642/Os_ciR298
					
						Organism
						
							Oryza sativa						
					
						Position
						
							chr4: 35093089-35095669  JBrowse»						
					
						Reference genome
						
							IRGSP-1.0.38						
					
						Type  
						
							e-circRNA							
									
						Identification method
						CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
					
						Parent gene
						
							Os04g0686650						
					
						Parent gene annotation
						
							Similar to H0723C07.13 protein. (Os04t0686650-00)
							
						Parent gene strand
						-
					
						Alternative splicing
						
							Os04g0686650_circ_g.1 						
					
						Support reads
						22/134/12
					
						Tissues
						leaf and panicle/root/shoot, root, seed
					
						Exon boundary  
						
							Yes-Yes							"Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.

						Splicing signals  
						
							CT-AC							The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.

						Number of exons covered
						Os04t0686650-00:4

General Information
CircRNA Name	Os04g0686650_circ_g.2
ID in PlantcircBase	osa_circ_026059
Alias	Os04circ18642/Os_ciR298
Organism	Oryza sativa
Position	chr4: 35093089-35095669 JBrowse»
Reference genome	IRGSP-1.0.38
Type	e-circRNA
Identification method	CIRCexplorer, CIRI, KNIFE, PcircRNA_finder, SMALT, Segemehl, circRNA_finder, find_circ
Parent gene	Os04g0686650
Parent gene annotation	Similar to H0723C07.13 protein. (Os04t0686650-00)
Parent gene strand	-
Alternative splicing	Os04g0686650_circ_g.1
Support reads	22/134/12
Tissues	leaf and panicle/root/shoot, root, seed
Exon boundary	Yes-Yes "Exon boundary" shows whether the splicing sites are on the boundary of exons or not. For example, "Yes-No" represents the donor splicing site is on the exon boundary and the accepter is not on the exon boundary.
Splicing signals	CT-AC The splicing signals of the circRNA. For example, "AG-GT" represents that the donor and the accepter splicing signal is "AG" and "GT", respectively.
Number of exons covered	Os04t0686650-00:4

			
						 Experimental Information
					
						Sanger sequencing for BSS  
						
							Yes							Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".

						PCR primers for BSS   
						
							F: CTGGTCAAGTCGTGAAGATCG
 R: GCAGCAAACTCCTGTCGAAT
PCR primers used in back-splicing site (BSS) validation.

						Sanger sequencing for FL   
						
							NA							Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.

						PCR primers for FL   
						
							NA							 PCR primers used in full-length (FL) sequence validation.

Experimental Information
Sanger sequencing for BSS	Yes Sanger sequencing for back-splicing site (BSS) validation. "Yes" represents Sanger sequencing has been performed to valid the back-splicing site, "No" represents the opposite, "NA" represents "not available".
PCR primers for BSS	F: CTGGTCAAGTCGTGAAGATCG R: GCAGCAAACTCCTGTCGAAT PCR primers used in back-splicing site (BSS) validation.
Sanger sequencing for FL	NA Sanger sequencing for full-length (FL) sequence validation of circRNAs. "Yes" represents Sanger sequencing has been performed to valid the full-length of circRNA, "No" represents the opposite.
PCR primers for FL	NA PCR primers used in full-length (FL) sequence validation.

			
				
						 Sequences
					

				
						Splice junction sequence  
						
							TTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTC
TGATTGTGACAAATTTGTCGGATTAGACAATGAGCCctcaggtgccatccatctatacgtgcca
gtttcagcagtcatttctcccccttgagatcggagccgagagacaccaaagtctgcgatcttca
cgacctat

									
								

					

						Assembled circRNA sequence  
						
							Yes
The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).

					

						Full-length trsnacripts
						
							Transcript length: 140
Transcript exons: 35093089-35093123,35095565-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCCCAATTTGCAGCAAACTCCTGTCGAATT
CAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATT
AGACAATGAGCC
Transcript length: 142
Transcript exons: 35093089-35093146,35095586-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATGTCGAA
TTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGA
TTAGACAATGAGCC
Transcript length: 155
Transcript exons: 35093089-35093173,35095600-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGCGCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGA
CAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 158
Transcript exons: 35093089-35093123,35095547-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGTCCGGATGCAATTTTCTCCCCAATTTGCA
GCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTG
TGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 164
Transcript exons: 35093089-35093137,35095555-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCAATTTTCTCCCCAA
TTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTC
TGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 164
Transcript exons: 35093089-35093151,35095569-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGA
TTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTC
TGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 166
Transcript exons: 35093089-35093145,35095561-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCTCCCC
AATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTC
TCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 172
Transcript exons: 35093089-35093156,35095566-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGA
ACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 181
Transcript exons: 35093089-35093156,35095557-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGC
AGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 187
Transcript exons: 35093089-35093151,35095546-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGA
TCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTT
TCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 187
Transcript exons: 35093089-35093171,35095566-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTT
TCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 188
Transcript exons: 35093089-35093154,35095548-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTT
TTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 191
Transcript exons: 35093089-35093156,35095547-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGTCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTAT
CTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Transcript length: 194
Transcript exons: 35093089-35093178,35095566-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGCGATCTTCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCC
TATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAG
CC
Transcript length: 195
Transcript exons: 35093089-35093161,35095548-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTC
CTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGA
GCC
Transcript length: 198
Transcript exons: 35093089-35093151,35095535-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGA
TCCCCAGAAGATCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAAT
CTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAA
TGAGCC
Transcript length: 201
Transcript exons: 35093089-35093170,35095551-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAG
AATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGA
CAATGAGCC
Transcript length: 202
Transcript exons: 35093089-35093167,35095547-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCA
GAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAG
ACAATGAGCC
Transcript length: 206
Transcript exons: 35093089-35093178,35095554-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGCGATCTTGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAA
TTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGA
TTAGACAATGAGCC
Transcript length: 207
Transcript exons: 35093089-35093167,35095542-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGGAAGATCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGA
ATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGG
ATTAGACAATGAGCC
Transcript length: 210
Transcript exons: 35093089-35093175,35095547-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGCGATTCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGT
CGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGT
CGGATTAGACAATGAGCC
Transcript length: 498
Transcript exons: 35093089-35093184,35093253-35093428,35094948-35095036,35
095533-35095669
CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGCGATCTTCACGACTTGACCAGAGCCAATTAGCAAATTGGCAGTCT
TCAAGTCCCTATGGATGATATTATTCTGGTGCAAATAATCCATTCCTTTTGAGATACCAATAGC
AATCCTAAGAACAACAGGAAGCTCCAAAGTATTGTTTTGCTTATGAAGGAAGTCATACAAATTA
CCTCCGGGCATGTACTCTGTTACAATGAGATACTTTCGATGCTTTGTGCAAGCTCCATAAAATT
GGACAACATTTTCATGATCAACACTCCTGGACATGACTTCAAGATCCCCAGAAGATCCGGATGC
AATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGC
TCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
						
					

						Genomic sequence
						
							CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC
CGAGAGACACCAAAGTCTGCGATCTTCACGACCTATTAAGAATTGAATCAGTGCTTCGACATCC
TTCAATTGATAAGCAACTTCGAAACAATATGCATACTTGACCAGAGCCAATTAGCAAATTGGCA
GTCTTCAAGTCCCTATGGATGATATTATTCTGGTGCAAATAATCCATTCCTTTTGAGATACCAA
TAGCAATCCTAAGAACAACAGGAAGCTCCAAAGTATTGTTTTGCTTATGAAGGAAGTCATACAA
ATTACCTCCGGGCATGTACTCTGGATGAGACACACAAATAACAAAGCAAAATATCAGTTGACAT
GAAATAATCGCAGAAAAGAAATTGCCCGATAATAGATACCCTAGATAGATAAATGCTCTACATT
GAGCTGACTTGATCAATTCGGAAAACTCAATACATAAAAATACAAACAAGCAATCCATGGCCTA
TGCTCGTTTGTGGGATTGAAGCAAGAAAACAGAGTGCACCCTTGGAAAGTTGGAAATCGGAACT
GACACATACAAACATTTTTTTCCCTAAAAAAGCAGTAAGATAAATATATAAATGATCTCATGGC
TACAATGATACTACTACTAACTTAACTCATCTAGATCGCTGGCTCTTGATATTATGTAAGAAAT
CCTATGGCATGACAAGGGAACAGAATAACAGTATTGTACATAAGTAATTATTTATTTACTATCC
ATGCAATTCTTGTCCATTATCTAAAAAAAGTATAATTCTTGTCATCTTCTGAATAAATAAAGAC
TAGACTGTACGAAATATTTGAACCAAACTCCCATGTGAATACGATGATTCAGTAAAGAAGATGC
ACAAATATCTTTTTTTAAGTGACTAGAAAAGAGTTTAGTTGGGATTCTGAACACAAGTTCACTT
GCAGTAAAATGAATTAACACCCTCCTAATAAAGCTCTTCAAAACATCTAAATATTTAATTAACA
GCAAGATTGGACAACCAATACCTTACTGCTAATCAATTATGCAATGGGAGTAATCTCAATAAAC
TAATGTCAAGTTAAAACGTGTGGATGATACATGTATCTTATAAATCCATGGATAGCATCTCCTT
ATTTATAGGTGCTATACAGGATGAGTCTGATATGAACTTTGCAGCTAGGGGCCCAGAACTCATC
GCCTTGCAATACAATAATAGAAAAAAATACTCATGTGATGTGTAAACAATACAGAAATTTGGCT
GGTAATTTAGAAAATGAAAATTTGTGTGCTCATTAGGAACGAAGACTTATTTCACATGCATGAA
TTAGAAAGTAGTAATTCACAGGCTAATTGAAGGGTGGGTAGAGACCTGTTGATAGGAATAGAGT
AGCAATATTCTTCTGACCAGACATATCTTGCACTATTTTCCATCATGGTGTAGAATTCTTTATG
CATGGACGCAACAAGCAAATGTAATGGTTACAGTATCCCTCCTATAGACTTAGCTGCTCTTGAA
GTCCCTACCAAAATGGATAAAAGACAGGAGTTATCCCCCGTCTTTCGAGATTTTTTGTTTTTAA
CAATTCCACCTAATGACGCTCACCAAAATGCAAAACTAAAAATGTTCAATCAACAGTTATTTAC
ATTAGATGCCAAGGAAACTGGAGATGAAAAACCAAGCACATTGGTTATACCCAGACATGAGCTC
AATCTTTTAGCCACCAACGCTACTCAGATTGTAAATATGCCCAAGCACTGCTATCTGAATCTTG
AGAAACAAGGATTTTGATTCCTACGAAAAAAATCAGCAGGCAAGATTATCAGCAATATTTGTGT
CACCTGTTACAATGAGATACTTTCGATGCTTTGTGCAAGCTCCATAAAATTGGACAACATTTTC
ATGATCAACACTCCTGGACATGACTTCACTGTATTAGAATTATCTGGAATTTTAAATGATTCAA
AGTCAAGTCTATGCATCAAAGTGATTTCAAAAGAAAGCTTACTTTAAAATCATTATTTCTTGCA
AGAACTCCACTTTCGAAGAATCGTTAACATGTTCAGATCTAAGAAATTTTACTGCAACATCCAC
ACCGAGATAAGTTCCTCGATATCTGCAGCCGAGGATACAAACAAGACCACTTGGTTAATGAACT
GCTGATCTTGCTAGAAACATTAAAAAATATAGAATAATGCACACAGCAATATGTCTCCACAAGT
TGAAATCAGAAACCCAGAACACAACTAGCTTTGTGACTATTTGTTGATAGTGCCCCCTTGTGAA
ACCATTTGCTTGTAAACAGATGTAAGAAAGGTCATGCAATCCACACTAGCAGTTGAGTTGTACC
TGTTGTTCTAAATAACTACCTCCGTTCTTTCCTAATATTCATTATTCCTAAGTAATAAGAGTTG
CATGTTTCTTACAGATCCCCAGAAGATCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCC
TGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATT
TGTCGGATTAGACAATGAGCC
						
					

			
		

Sequences
Splice junction sequence	TTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTC TGATTGTGACAAATTTGTCGGATTAGACAATGAGCCctcaggtgccatccatctatacgtgcca gtttcagcagtcatttctcccccttgagatcggagccgagagacaccaaagtctgcgatcttca cgacctat
Assembled circRNA sequence	Yes The sequence of a circRNA based on assembly using circseq-cup (Ye et al., 2016) or CIRI-full (Zheng and Zhao, 2018) or CIRCexplorer2 (Zhang et al., 2016).
Full-length trsnacripts	Transcript length: 140 Transcript exons: 35093089-35093123,35095565-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCCCAATTTGCAGCAAACTCCTGTCGAATT CAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATT AGACAATGAGCC Transcript length: 142 Transcript exons: 35093089-35093146,35095586-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATGTCGAA TTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGA TTAGACAATGAGCC Transcript length: 155 Transcript exons: 35093089-35093173,35095600-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGCGCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGA CAAATTTGTCGGATTAGACAATGAGCC Transcript length: 158 Transcript exons: 35093089-35093123,35095547-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGTCCGGATGCAATTTTCTCCCCAATTTGCA GCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTG TGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 164 Transcript exons: 35093089-35093137,35095555-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCAATTTTCTCCCCAA TTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTC TGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 164 Transcript exons: 35093089-35093151,35095569-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGA TTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTC TGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 166 Transcript exons: 35093089-35093145,35095561-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCTCCCC AATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTC TCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 172 Transcript exons: 35093089-35093156,35095566-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGA ACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 181 Transcript exons: 35093089-35093156,35095557-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGC AGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 187 Transcript exons: 35093089-35093151,35095546-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGA TCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTT TCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 187 Transcript exons: 35093089-35093171,35095566-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTT TCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 188 Transcript exons: 35093089-35093154,35095548-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTT TTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 191 Transcript exons: 35093089-35093156,35095547-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGTCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTAT CTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC Transcript length: 194 Transcript exons: 35093089-35093178,35095566-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGCGATCTTCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCC TATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAG CC Transcript length: 195 Transcript exons: 35093089-35093161,35095548-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTC CTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGA GCC Transcript length: 198 Transcript exons: 35093089-35093151,35095535-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGA TCCCCAGAAGATCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAAT CTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAA TGAGCC Transcript length: 201 Transcript exons: 35093089-35093170,35095551-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAG AATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGA CAATGAGCC Transcript length: 202 Transcript exons: 35093089-35093167,35095547-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCA GAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAG ACAATGAGCC Transcript length: 206 Transcript exons: 35093089-35093178,35095554-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGCGATCTTGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAA TTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGA TTAGACAATGAGCC Transcript length: 207 Transcript exons: 35093089-35093167,35095542-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGGAAGATCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGA ATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGTCGG ATTAGACAATGAGCC Transcript length: 210 Transcript exons: 35093089-35093175,35095547-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGCGATTCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCCTGT CGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATTTGT CGGATTAGACAATGAGCC Transcript length: 498 Transcript exons: 35093089-35093184,35093253-35093428,35094948-35095036,35 095533-35095669 CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGCGATCTTCACGACTTGACCAGAGCCAATTAGCAAATTGGCAGTCT TCAAGTCCCTATGGATGATATTATTCTGGTGCAAATAATCCATTCCTTTTGAGATACCAATAGC AATCCTAAGAACAACAGGAAGCTCCAAAGTATTGTTTTGCTTATGAAGGAAGTCATACAAATTA CCTCCGGGCATGTACTCTGTTACAATGAGATACTTTCGATGCTTTGTGCAAGCTCCATAAAATT GGACAACATTTTCATGATCAACACTCCTGGACATGACTTCAAGATCCCCAGAAGATCCGGATGC AATTTTCTCCCCAATTTGCAGCAAACTCCTGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGC TCTAGAACTTTCTCTGATTGTGACAAATTTGTCGGATTAGACAATGAGCC
Genomic sequence	CTCAGGTGCCATCCATCTATACGTGCCAGTTTCAGCAGTCATTTCTCCCCCTTGAGATCGGAGC CGAGAGACACCAAAGTCTGCGATCTTCACGACCTATTAAGAATTGAATCAGTGCTTCGACATCC TTCAATTGATAAGCAACTTCGAAACAATATGCATACTTGACCAGAGCCAATTAGCAAATTGGCA GTCTTCAAGTCCCTATGGATGATATTATTCTGGTGCAAATAATCCATTCCTTTTGAGATACCAA TAGCAATCCTAAGAACAACAGGAAGCTCCAAAGTATTGTTTTGCTTATGAAGGAAGTCATACAA ATTACCTCCGGGCATGTACTCTGGATGAGACACACAAATAACAAAGCAAAATATCAGTTGACAT GAAATAATCGCAGAAAAGAAATTGCCCGATAATAGATACCCTAGATAGATAAATGCTCTACATT GAGCTGACTTGATCAATTCGGAAAACTCAATACATAAAAATACAAACAAGCAATCCATGGCCTA TGCTCGTTTGTGGGATTGAAGCAAGAAAACAGAGTGCACCCTTGGAAAGTTGGAAATCGGAACT GACACATACAAACATTTTTTTCCCTAAAAAAGCAGTAAGATAAATATATAAATGATCTCATGGC TACAATGATACTACTACTAACTTAACTCATCTAGATCGCTGGCTCTTGATATTATGTAAGAAAT CCTATGGCATGACAAGGGAACAGAATAACAGTATTGTACATAAGTAATTATTTATTTACTATCC ATGCAATTCTTGTCCATTATCTAAAAAAAGTATAATTCTTGTCATCTTCTGAATAAATAAAGAC TAGACTGTACGAAATATTTGAACCAAACTCCCATGTGAATACGATGATTCAGTAAAGAAGATGC ACAAATATCTTTTTTTAAGTGACTAGAAAAGAGTTTAGTTGGGATTCTGAACACAAGTTCACTT GCAGTAAAATGAATTAACACCCTCCTAATAAAGCTCTTCAAAACATCTAAATATTTAATTAACA GCAAGATTGGACAACCAATACCTTACTGCTAATCAATTATGCAATGGGAGTAATCTCAATAAAC TAATGTCAAGTTAAAACGTGTGGATGATACATGTATCTTATAAATCCATGGATAGCATCTCCTT ATTTATAGGTGCTATACAGGATGAGTCTGATATGAACTTTGCAGCTAGGGGCCCAGAACTCATC GCCTTGCAATACAATAATAGAAAAAAATACTCATGTGATGTGTAAACAATACAGAAATTTGGCT GGTAATTTAGAAAATGAAAATTTGTGTGCTCATTAGGAACGAAGACTTATTTCACATGCATGAA TTAGAAAGTAGTAATTCACAGGCTAATTGAAGGGTGGGTAGAGACCTGTTGATAGGAATAGAGT AGCAATATTCTTCTGACCAGACATATCTTGCACTATTTTCCATCATGGTGTAGAATTCTTTATG CATGGACGCAACAAGCAAATGTAATGGTTACAGTATCCCTCCTATAGACTTAGCTGCTCTTGAA GTCCCTACCAAAATGGATAAAAGACAGGAGTTATCCCCCGTCTTTCGAGATTTTTTGTTTTTAA CAATTCCACCTAATGACGCTCACCAAAATGCAAAACTAAAAATGTTCAATCAACAGTTATTTAC ATTAGATGCCAAGGAAACTGGAGATGAAAAACCAAGCACATTGGTTATACCCAGACATGAGCTC AATCTTTTAGCCACCAACGCTACTCAGATTGTAAATATGCCCAAGCACTGCTATCTGAATCTTG AGAAACAAGGATTTTGATTCCTACGAAAAAAATCAGCAGGCAAGATTATCAGCAATATTTGTGT CACCTGTTACAATGAGATACTTTCGATGCTTTGTGCAAGCTCCATAAAATTGGACAACATTTTC ATGATCAACACTCCTGGACATGACTTCACTGTATTAGAATTATCTGGAATTTTAAATGATTCAA AGTCAAGTCTATGCATCAAAGTGATTTCAAAAGAAAGCTTACTTTAAAATCATTATTTCTTGCA AGAACTCCACTTTCGAAGAATCGTTAACATGTTCAGATCTAAGAAATTTTACTGCAACATCCAC ACCGAGATAAGTTCCTCGATATCTGCAGCCGAGGATACAAACAAGACCACTTGGTTAATGAACT GCTGATCTTGCTAGAAACATTAAAAAATATAGAATAATGCACACAGCAATATGTCTCCACAAGT TGAAATCAGAAACCCAGAACACAACTAGCTTTGTGACTATTTGTTGATAGTGCCCCCTTGTGAA ACCATTTGCTTGTAAACAGATGTAAGAAAGGTCATGCAATCCACACTAGCAGTTGAGTTGTACC TGTTGTTCTAAATAACTACCTCCGTTCTTTCCTAATATTCATTATTCCTAAGTAATAAGAGTTG CATGTTTCTTACAGATCCCCAGAAGATCCGGATGCAATTTTCTCCCCAATTTGCAGCAAACTCC TGTCGAATTCAGAATCTCCTATCTTTTCCTGCAGCTCTAGAACTTTCTCTGATTGTGACAAATT TGTCGGATTAGACAATGAGCC

			
						 Conservation Information
					
						Conserved circRNAs
						
							osi_circ_005862* osi_circ_015035 						
					
						PMCS
						0.688176973

Conservation Information
Conserved circRNAs	osi_circ_005862* osi_circ_015035
PMCS	0.688176973

			
						 Functional Information
					
						Coding potential
						Y
					
						Potential coding position
						
							35095029-35093140(+)
35095664-35093299(+)
35095031-35093091(-)
						
						Potential amino acid sequence
						
							MTSRSPEDPDAIFSPICSKLLSNSESPIFSCSSRTFSDCDKFVGLDNEPSGAIHLYVPVSAVIS
PP*(+)
MSPQVPSIYTCQFQQSFLPLEIGAERHQSLRSSRLDQSQLANWQSSSPYG*(+)
MSRSVDHENVVQFYGACTKHRKYLIVTEYMPGGNLYDFLHKQNNTLELPVVLRIAIGISKGMDY
LHQNNIIHRDLKTANLLIGSGQVVKIADFGVSRLRSQGGEMTAETGTYRWMAPEGSLSNPTNLS
QSEKVLELQEKIGDSEFDRSLLQIGEKIASGSSGDLEVMSRSVDHENVVQFYGACTKHRKYLIV
TEYMPGGNLYDFLHKQNNTLELPVVLRIAIGISKGMDYLHQNNIIHRDLKTANLLIGSGQVVKI
ADFGVSRLRSQGGEMTAETGTYRWMAPEGSLSNPTNLSQSEKVLELQEKIGDSEFDRSLLQIGE
KIASGSSGDLEVMSRSVDHENVVQFYGACTKHRKYLIVTEYMPGGNLYDFLHKQNNTLELPVVL
RIAIGISKGMDYLHQNNIIHRDLKTANLLIGSGQVVKIADFGVSRLRSQGGEMTAETGTYRWMA
PEGSLSNPTNLSQSEKVLELQEKIGDSEFDRSLLQIGEKIASGSSGDLEVMSRSVDHENVVQFY
GACTKHRKYLIVTEYMPGGNLYDFLHKQNNTLELPVVLRIAIGISKGMDYLHQNNIIHRDLKTA
NLLIGSGQVVKIADFGVSRLRSQGGEMTAETGTYRWMAPE(-)
						
						Sponge-miRNAs
						
							NA						
					
						circRNA-miRNA-mRNA network
						 VISUALIZATION
					
						Potential function description
						responsive to Pi-starvation

Functional Information
Coding potential	Y
Potential coding position	35095029-35093140(+) 35095664-35093299(+) 35095031-35093091(-)
Potential amino acid sequence	MTSRSPEDPDAIFSPICSKLLSNSESPIFSCSSRTFSDCDKFVGLDNEPSGAIHLYVPVSAVIS PP(+) MSPQVPSIYTCQFQQSFLPLEIGAERHQSLRSSRLDQSQLANWQSSSPYG(+) MSRSVDHENVVQFYGACTKHRKYLIVTEYMPGGNLYDFLHKQNNTLELPVVLRIAIGISKGMDY LHQNNIIHRDLKTANLLIGSGQVVKIADFGVSRLRSQGGEMTAETGTYRWMAPEGSLSNPTNLS QSEKVLELQEKIGDSEFDRSLLQIGEKIASGSSGDLEVMSRSVDHENVVQFYGACTKHRKYLIV TEYMPGGNLYDFLHKQNNTLELPVVLRIAIGISKGMDYLHQNNIIHRDLKTANLLIGSGQVVKI ADFGVSRLRSQGGEMTAETGTYRWMAPEGSLSNPTNLSQSEKVLELQEKIGDSEFDRSLLQIGE KIASGSSGDLEVMSRSVDHENVVQFYGACTKHRKYLIVTEYMPGGNLYDFLHKQNNTLELPVVL RIAIGISKGMDYLHQNNIIHRDLKTANLLIGSGQVVKIADFGVSRLRSQGGEMTAETGTYRWMA PEGSLSNPTNLSQSEKVLELQEKIGDSEFDRSLLQIGEKIASGSSGDLEVMSRSVDHENVVQFY GACTKHRKYLIVTEYMPGGNLYDFLHKQNNTLELPVVLRIAIGISKGMDYLHQNNIIHRDLKTA NLLIGSGQVVKIADFGVSRLRSQGGEMTAETGTYRWMAPE(-)
Sponge-miRNAs	NA
circRNA-miRNA-mRNA network	VISUALIZATION
Potential function description	responsive to Pi-starvation

			
						 Other Information
					
						References
						Lu et al., 2015;Ye et al., 2015;Chu et al., 2017

circRNA

Detail information of Os04g0686650_circ_g.2

Address

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